Web-Based Search Tool for Visualizing Instrument Performance Using the Triple Knockout (TKO) Proteome Standard von Gygi, Jeremy P, Yu, Qing, Navarrete-Perea, Jose, Rad, Ramin, Gygi, Steven P, Paulo, Joao A

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ACP Acylation Is an Acetyl-CoA-Dependent Modification Required for Electron Transport Chain Assembly von Van Vranken, Jonathan G., Nowinski, Sara M., Clowers, Katie J., Jeong, Mi-Young, Ouyang, Yeyun, Berg, Jordan A., Gygi, Jeremy P., Gygi, Steven P., Winge, Dennis R., Rutter, Jared

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A supervised Bayesian factor model for the identification of multi-omics signatures von Gygi, Jeremy P, Konstorum, Anna, Pawar, Shrikant, Aron, Edel, Kleinstein, Steven H, Guan, Leying

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Assessing interference in isobaric tag‐based sample multiplexing using an 18‐plex interference standard von Navarrete‐Perea, Jose, Liu, Xinyue, Rad, Ramin, Gygi, Jeremy P., Gygi, Steven P., Paulo, Joao A.

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Predictive overfitting in immunological applications: Pitfalls and solutions von Gygi, Jeremy P., Kleinstein, Steven H., Guan, Leying

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Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortality von Gygi, Jeremy P, Maguire, Cole, Patel, Ravi K, Shinde, Pramod, Konstorum, Anna, Shannon, Casey P, Xu, Leqi, Hoch, Annmarie, Jayavelu, Naresh Doni, Haddad, Elias K, Reed, Elaine F, Kraft, Monica, McComsey, Grace A, Metcalf, Jordan P, Ozonoff, Al, Esserman, Denise, Cairns, Charles B, Rouphael, Nadine, Bosinger, Steven E, Kim-Schulze, Seunghee, Krammer, Florian, Rosen, Lindsey B, van Bakel, Harm, Wilson, Michael, Eckalbar, Walter L, Maecker, Holden T, Langelier, Charles R, Steen, Hanno, Altman, Matthew C, Montgomery, Ruth R, Levy, Ofer, Melamed, Esther, Pulendran, Bali, Diray-Arce, Joann, Smolen, Kinga K, Fragiadakis, Gabriela K, Becker, Patrice M, Sekaly, Rafick P, Ehrlich, Lauren Ir, Fourati, Slim, Peters, Bjoern, Kleinstein, Steven H, Guan, Leying

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The Immune Signatures data resource, a compendium of systems vaccinology datasets von Diray-Arce, Joann, Miller, Helen E. R., Henrich, Evan, Gerritsen, Bram, Mulè, Matthew P., Fourati, Slim, Gygi, Jeremy, Hagan, Thomas, Tomalin, Lewis, Rychkov, Dmitry, Kazmin, Dmitri, Chawla, Daniel G., Meng, Hailong, Dunn, Patrick, Campbell, John, Sarwal, Minnie, Tsang, John S., Levy, Ofer, Pulendran, Bali, Sekaly, Rafick, Floratos, Aris, Gottardo, Raphael, Kleinstein, Steven H., Suárez-Fariñas, Mayte

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A multi-omics systems vaccinology resource to develop and test computational models of immunity von Shinde, Pramod, Soldevila, Ferran, Reyna, Joaquin, Aoki, Minori, Rasmussen, Mikkel, Willemsen, Lisa, Kojima, Mari, Ha, Brendan, Greenbaum, Jason A., Overton, James A., Guzman-Orozco, Hector, Nili, Somayeh, Orfield, Shelby, Gygi, Jeremy P., da Silva Antunes, Ricardo, Sette, Alessandro, Grant, Barry, Olsen, Lars Rønn, Konstorum, Anna, Guan, Leying, Ay, Ferhat, Kleinstein, Steven H., Peters, Bjoern

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A systems vaccinology resource to develop and test computational models of immunity von Shinde, Pramod, Willemsen, Lisa, Orfield, Shelby, Kojima, Mari, Reyna, Joaquin, Ha, Brendan, Greenbaum, Jason, Overton, James, Nili, Somayeh, Rasmussen, Mikkel, Gygi, Jeremy, Antunes, Ricardo da Silva, Sette, Alessandro, Olsen, Lars Ronn, Grant, Barry, Konstorum, Anna, Guan, Leying

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Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study von Ozonoff, Al, Jayavelu, Naresh Doni, Liu, Shanshan, Melamed, Esther, Milliren, Carly E., Qi, Jingjing, Geng, Linda N., McComsey, Grace A., Cairns, Charles B., Baden, Lindsey R., Schaenman, Joanna, Shaw, Albert C., Samaha, Hady, Seyfert-Margolis, Vicki, Krammer, Florian, Rosen, Lindsey B., Steen, Hanno, Syphurs, Caitlin, Dandekar, Ravi, Shannon, Casey P., Sekaly, Rafick P., Ehrlich, Lauren I. R., Corry, David B., Kheradmand, Farrah, Atkinson, Mark A., Brakenridge, Scott C., Higuita, Nelson I. Agudelo, Metcalf, Jordan P., Hough, Catherine L., Messer, William B., Pulendran, Bali, Nadeau, Kari C., Davis, Mark M., Sesma, Ana Fernandez, Simon, Viviana, van Bakel, Harm, Kim-Schulze, Seunghee, Hafler, David A., Levy, Ofer, Kraft, Monica, Bime, Chris, Haddad, Elias K., Calfee, Carolyn S., Erle, David J., Langelier, Charles R., Eckalbar, Walter, Bosinger, Steven E., Peters, Bjoern, Kleinstein, Steven H., Reed, Elaine F., Augustine, Alison D., Diray-Arce, Joann, Maecker, Holden T., Altman, Matthew C., Montgomery, Ruth R., Becker, Patrice M., Rouphael, Nadine

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IgM N-glycosylation correlates with COVID-19 severity and rate of complement deposition von Haslund-Gourley, Benjamin S., Woloszczuk, Kyra, Hou, Jintong, Connors, Jennifer, Cusimano, Gina, Bell, Mathew, Taramangalam, Bhavani, Fourati, Slim, Mege, Nathan, Bernui, Mariana, Altman, Matthew C., Krammer, Florian, van Bakel, Harm, Maecker, Holden T., Rouphael, Nadine, Diray-Arce, Joann, Wigdahl, Brian, Kutzler, Michele A., Cairns, Charles B., Haddad, Elias K., Comunale, Mary Ann

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Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study von Ozonoff, Al, Milliren, Carly E., Cairns, Charles B., Shaw, Albert C., van Bakel, Harm, Esserman, Denise A., Simon, Viviana, Bime, Christian, Haddad, Elias K., Pulendran, Bali, McComsey, Grace A., Augustine, Alison D., Ozonoff, Al, Schaenman, Joanna, Milliren, Carly E., Cairns, Charles B., Kraft, Monica, Sesma, Ana Fernandez, Erle, David J., Messer, William B., Higuita, Nelson I. Agudelo, Atkinson, Mark A., Brakenridge, Scott C., Ehrlich, Lauren I.R., Peters, Bjoern, Reed, Elaine F., McEnaney, Kerry, Lentucci, Claudia, Saluvan, Mehmet, Chang, Ana C., Shaheen, Tanzia, Kho, Alvin T., Patel, Ravi, Guan, Leying, Khalil, Zain, Fourati, Slim, Overton, James A., Salehi-Rad, Ramin, Kangelaris, Kirsten N., Kim, James N., Goonewardene, I. Michael, Smith, Cecilia M., Mosier, Jarrod, Kimura, Hiroki, Walsh, Stephen R., Dela Cruz, Charles, Farhadian, Shelli, Iwasaki, Akiko, Ahuja, Neera, Rogers, Angela J., Artandi, Maja, Drevets, Douglas A., Anderson, Matthew L., Guirgis, Faheem W., Busch, Johanna, Gandhi, Saurin, Mehta, Aneesh K., Khor, Bernard, Farrugia, Keith, Elashoff, David, Ramires-Sanchez, Estefania, Magyar, Clara E., Gonzalez, Ana, Jones, Norman, Lota, Raphael, Milush, Jeff, Altamirano, Luz Torres, Tietje-Ulrich, Gayelan, Bernui, Mariana, Rogowski, Brandon, Woloszczuk, Kyra, Bell, Mathew R., Hughes, Trina, Chaudhary, Omkar, Coppi, Andreas, Fournier, John, Vijayakumar, Pavithra, Wunder Jr, Elsio, Young, H. Patrick, Zhao, Yujiao, Eaker, Lily Q., Bermúdez-González, Maria C., Raskin, Ariel, Kleiner, Giulio, Do, Evan Do, Hagan, Thomas, Din, Hena Naz, Yang, Samuel, Brunton, Amanda, Booth, J. Leland, Moldawer, Lyle L., Nelson, Ebony, Gabriele, Gio, Hussaini, Laila, Hellmeister, Kieffer, Johnson, Brandi, Ciric, Caroline R., Hewitt, Lauren, Carter, Erin, Panganiban, Bernadine

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The Immune Signatures data resource, a compendium of systems vaccinology datasets von Diray-Arce, Joann, Miller, Helen ER, Henrich, Evan, Gerritsen, Bram, Mulè, Matthew P, Fourati, Slim, Gygi, Jeremy, Hagan, Thomas, Tomalin, Lewis, Rychkov, Dmitry, Kazmin, Dmitri, Chawla, Daniel G, Meng, Hailong, Dunn, Patrick, Campbell, John, Human Immunology Project Consortium (HIPC), Sarwal, Minnie, Tsang, John S, Levy, Ofer, Pulendran, Bali, Sekaly, Rafick, Floratos, Aris, Gottardo, Raphael, Kleinstein, Steven H, Suárez-Fariñas, Mayte

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The Immune Signatures data resource, a compendium of systems vaccinology datasets von Diray-Arce, Joann, Miller, Helen ER, Henrich, Evan, Gerritsen, Bram, Mulè, Matthew P, Fourati, Slim, Gygi, Jeremy, Hagan, Thomas, Tomalin, Lewis, Rychkov, Dmitry, Kazmin, Dmitri, Chawla, Daniel G, Meng, Hailong, Dunn, Patrick, Campbell, John, Human Immunology Project Consortium (HIPC), Sarwal, Minnie, Tsang, John S, Levy, Ofer, Pulendran, Bali, Sekaly, Rafick, Floratos, Aris, Gottardo, Raphael, Kleinstein, Steven H, Suárez-Fariñas, Mayte

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HIPC-II Immune Signatures Data Resource von Diray-Arce, Joann, ImmuneSpace, Henrich, Evan, Gerritsen, Bram, Mulé, Matthew P., Fourati, Slim, Gygi, Jeremy P., Hagan, Thomas, Tomalin, Lewis E., Rychkov, Dmitry, Kazmin, Dmitri, Chawla, Daniel G, Meng, Hailong, Dunn, Patrick, Campbell, John, Sarwal, Minnie, Tsang, John S., Levy, Ofer, Pulendran, Bali, Sekaly, Rafick, Floratos, Aris, Gottardo, Raphael, H. Kleinstein, Steven, Suárez-Fariñas, Mayte

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METHODS AND SYSTEMS FOR LOCATING POSITIONS von DUNCAN GEORGIA, GYGI JEREMY, COWLEY TIMOTHY, CHLEBEK CAROLYN, SCHARMAN ALAN

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Magnetic easy step in/out snow board binding von HUGHES CATHERINE ELIZABETH, GYGI JEREMY PACE, SMITH TIMOTHY MICHAEL, PRINOS ALANA MARIE, SCHARMAN ALAN JOEL, RICE JUSTIN STAART, ATANASOFF ZACHARY JOHN

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Quantitative mass spectrometry-based multiplexing compares the abundance of 5000 S. cerevisiae proteins across 10 carbon sources von Paulo, Joao A., O'Connell, Jeremy D., Everley, Robert A., O'Brien, Jonathon, Gygi, Micah A., Gygi, Steven P.

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A Triple Knockout (TKO) Proteomics Standard for Diagnosing Ion Interference in Isobaric Labeling Experiments von Paulo, Joao A., O’Connell, Jeremy D., Gygi, Steven P.

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Proteome-Wide Evaluation of Two Common Protein Quantification Methods von O’Connell, Jeremy D, Paulo, Joao A, O’Brien, Jonathon J, Gygi, Steven P

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