WormBase in 2022—data, processes, and tools for analyzing Caenorhabditis elegans von Davis, Paul, Zarowiecki, Magdalena, Arnaboldi, Valerio, Becerra, Andrés, Cain, Scott, Chan, Juancarlos, Chen, Wen J, Cho, Jaehyoung, da Veiga Beltrame, Eduardo, Diamantakis, Stavros, Gao, Sibyl, Grigoriadis, Dionysis, Grove, Christian A, Harris, Todd W, Kishore, Ranjana, Le, Tuan, Lee, Raymond Y N, Luypaert, Manuel, Müller, Hans-Michael, Nakamura, Cecilia, Nuin, Paulo, Paulini, Michael, Quinton-Tulloch, Mark, Raciti, Daniela, Rodgers, Faye H, Russell, Matthew, Schindelman, Gary, Singh, Archana, Stickland, Tim, Van Auken, Kimberly, Wang, Qinghua, Williams, Gary, Wright, Adam J, Yook, Karen, Berriman, Matt, Howe, Kevin L, Schedl, Tim, Stein, Lincoln, Sternberg, Paul W

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WormBase: a modern Model Organism Information Resource von Harris, Todd W, Arnaboldi, Valerio, Cain, Scott, Chan, Juancarlos, Chen, Wen J, Cho, Jaehyoung, Davis, Paul, Gao, Sibyl, Grove, Christian A, Kishore, Ranjana, Lee, Raymond Y N, Muller, Hans-Michael, Nakamura, Cecilia, Nuin, Paulo, Paulini, Michael, Raciti, Daniela, Rodgers, Faye H, Russell, Matthew, Schindelman, Gary, Auken, Kimberly V, Wang, Qinghua, Williams, Gary, Wright, Adam J, Yook, Karen, Howe, Kevin L, Schedl, Tim, Stein, Lincoln, Sternberg, Paul W

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Harmonizing model organism data in the Alliance of Genome Resources von Agapite, Julie, Albou, Laurent-Philippe, Aleksander, Suzanne A, Alexander, Micheal, Anagnostopoulos, Anna V, Antonazzo, Giulia, Argasinska, Joanna, Arnaboldi, Valerio, Attrill, Helen, Becerra, Andrés, Bello, Susan M, Blake, Judith A, Blodgett, Olin, Bradford, Yvonne M, Bult, Carol J, Cain, Scott, Calvi, Brian R, Carbon, Seth, Chan, Juancarlos, Chen, Wen J, Michael Cherry, J, Cho, Jaehyoung, Christie, Karen R, Crosby, Madeline A, Davis, Paul, da Veiga Beltrame, Eduardo, De Pons, Jeffrey L, D’Eustachio, Peter, Diamantakis, Stavros, Dolan, Mary E, dos Santos, Gilberto, Douglass, Eric, Dunn, Barbara, Eagle, Anne, Ebert, Dustin, Engel, Stacia R, Fashena, David, Foley, Saoirse, Frazer, Ken, Gao, Sibyl, Gibson, Adam C, Gondwe, Felix, Goodman, Josh, Sian Gramates, L, Grove, Christian A, Hale, Paul, Harris, Todd, Thomas Hayman, G, Hill, David P, Howe, Douglas G, Howe, Kevin L, Hu, Yanhui, Jha, Sagar, Kadin, James A, Kaufman, Thomas C, Kalita, Patrick, Karra, Kalpana, Kishore, Ranjana, Kwitek, Anne E, Laulederkind, Stanley J F, Lee, Raymond, Longden, Ian, Luypaert, Manuel, MacPherson, Kevin A, Martin, Ryan, Marygold, Steven J, Matthews, Beverley, McAndrews, Monica S, Millburn, Gillian, Miyasato, Stuart, Motenko, Howie, Moxon, Sierra, Muller, Hans-Michael, Mungall, Christopher J, Muruganujan, Anushya, Mushayahama, Tremayne, Nalabolu, Harika S, Nash, Robert S, Ng, Patrick, Nuin, Paulo, Paddock, Holly, Paulini, Michael, Perrimon, Norbert, Pich, Christian, Quinton-Tulloch, Mark, Raciti, Daniela, Ramachandran, Sridhar, Richardson, Joel E, Gelbart, Susan Russo, Ruzicka, Leyla, Schaper, Kevin, Schindelman, Gary, Shimoyama, Mary, Simison, Matt, Shaw, David R, Shrivatsav, Ajay, Singer, Amy, Skrzypek, Marek, Smith, Constance M, Smith, Cynthia L

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A Multiparameter Network Reveals Extensive Divergence between C. elegans bHLH Transcription Factors von Grove, Christian A., De Masi, Federico, Barrasa, M. Inmaculada, Newburger, Daniel E., Alkema, Mark J., Bulyk, Martha L., Walhout, Albertha J.M.

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Insight into transcription factor gene duplication from Caenorhabditis elegans Promoterome-driven expression patterns von Reece-Hoyes, John S, Shingles, Jane, Dupuy, Denis, Grove, Christian A, Walhout, Albertha J M, Vidal, Marc, Hope, Ian A

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Student Annotations of Published Data as a Collaboration between an Online Laboratory Course and the C. elegans Database, WormBase von Dahlberg, Caroline L, Grove, Christian A, Hulsey-Vincent, Heino, Ismail, Samiya

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Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes von Grove, Christian, Cain, Scott, Chen, Wen J., Davis, Paul, Harris, Todd, Howe, Kevin L., Kishore, Ranjana, Lee, Raymond, Paulini, Michael, Raciti, Daniela, Tuli, Mary Ann, Van Auken, Kimberly, Williams, Gary

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A Gene-Centered C. elegans Protein-DNA Interaction Network von Deplancke, Bart, Mukhopadhyay, Arnab, Ao, Wanyuan, Elewa, Ahmed M., Grove, Christian A., Martinez, Natalia J., Sequerra, Reynaldo, Doucette-Stamm, Lynn, Reece-Hoyes, John S., Hope, Ian A., Tissenbaum, Heidi A., Mango, Susan E., Walhout, Albertha J.M.

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Using a structural and logics systems approach to infer bHLH-DNA binding specificity determinants von De Masi, Federico, Grove, Christian A., Vedenko, Anastasia, Alibés, Andreu, Gisselbrecht, Stephen S., Serrano, Luis, Bulyk, Martha L., Walhout, Albertha J. M.

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Matrix and Steiner-triple-system smart pooling assays for high-performance transcription regulatory network mapping von Walhout, Albertha J M, Vermeirssen, Vanessa, Deplancke, Bart, Barrasa, M Inmaculada, Reece-Hoyes, John S, Arda, H Efsun, Grove, Christian A, Martinez, Natalia J, Sequerra, Reynaldo, Doucette-Stamm, Lynn, Brent, Michael R

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2018 Update on Protein-Protein Interaction Data in WormBase von Cho, Jaehyoung, Grove, Christian, Van Auken, Kimberly, Chan, Juancarlos, Gao, Sibyl, Sternberg, Paul

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A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks von Reece-Hoyes, John S, Deplancke, Bart, Shingles, Jane, Grove, Christian A, Hope, Ian A, Walhout, Albertha J M

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Transcription factor functionality and transcription regulatory networks von Grove, Christian A, Walhout, Albertha J M

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Alliance of Genome Resources Portal: unified model organism research platform von Agapite, Julie, Albou, Laurent-Philippe, Aleksander, Suzi, Argasinska, Joanna, Arnaboldi, Valerio, Attrill, Helen, Bello, Susan M., Blake, Judith A., Blodgett, Olin, Bradford, Yvonne M., Bult, Carol J., Cain, Scott, Calvi, Brian R., Carbon, Seth, Chan, Juancarlos, Chen, Wen J., Cherry, J. Michael, Cho, Jaehyoung, Christie, Karen R., Crosby, Madeline A., De Pons, Jeff, Dolan, Mary E., dos Santos, Gilberto, Dunn, Barbara Dunn Nathan, Eagle, Anne, Ebert, Dustin, Engel, Stacia R., Fashena, David, Frazer, Ken, Gao, Sibyl, Gondwe, Felix, Goodman, Josh, Gramates, L. Sian, Grove, Christian A., Harris, Todd, Harrison, Marie-Claire, Howe, Douglas G., Howe, Kevin L., Jha, Sagar, Kadin, James A., Kaufman, Thomas C., Kalita, Patrick, Karra, Kalpana, Kishore, Ranjana, Laulederkind, Stan, Lee, Raymond, MacPherson, Kevin A., Marygold, Steven J., Matthews, Beverley, Millburn, Gillian, Miyasato, Stuart, Moxon, Sierra, Mueller, Hans-Michael, Mungall, Christopher, Muruganujan, Anushya, Mushayahama, Tremayne, Nash, Robert S., Ng, Patrick, Paulini, Michael, Perrimon, Norbert, Pich, Christian, Raciti, Daniela, Richardson, Joel E., Russell, Matthew, Gelbart, Susan Russo, Ruzicka, Leyla, Schaper, Kevin, Shimoyama, Mary, Simison, Matt, Smith, Cynthia, Shaw, David R., Shrivatsav, Ajay, Skrzypek, Marek, Smith, Jennifer R., Sternberg, Paul W., Tabone, Christopher J., Thomas, Paul D., Thota, Jyothi, Toro, Sabrina, Tomczuk, Monika, Tutaj, Marek, Tutaj, Monika, Urbano, Jose-Maria, Van Auken, Kimberly, Van Slyke, Ceri E., Wang, Shur-Jen, Weng, Shuai, Westerfield, Monte, Williams, Gary, Wong, Edith D., Wright, Adam, Yook, Karen

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WormBase 2017: molting into a new stage von Lee, Raymond Y N, Howe, Kevin L, Harris, Todd W, Arnaboldi, Valerio, Cain, Scott, Chan, Juancarlos, Chen, Wen J, Davis, Paul, Gao, Sibyl, Grove, Christian, Kishore, Ranjana, Muller, Hans-Michael, Nakamura, Cecilia, Nuin, Paulo, Paulini, Michael, Raciti, Daniela, Rodgers, Faye, Russell, Matt, Schindelman, Gary, Tuli, Mary Ann, Van Auken, Kimberly, Wang, Qinghua, Williams, Gary, Wright, Adam, Yook, Karen, Berriman, Matthew, Kersey, Paul, Schedl, Tim, Stein, Lincoln, Sternberg, Paul W

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WormBase 2016: expanding to enable helminth genomic research von Howe, Kevin L, Bolt, Bruce J, Cain, Scott, Chan, Juancarlos, Chen, Wen J, Davis, Paul, Done, James, Down, Thomas, Gao, Sibyl, Grove, Christian, Harris, Todd W, Kishore, Ranjana, Lee, Raymond, Lomax, Jane, Li, Yuling, Muller, Hans-Michael, Nakamura, Cecilia, Nuin, Paulo, Paulini, Michael, Raciti, Daniela, Schindelman, Gary, Stanley, Eleanor, Tuli, Mary Ann, Van Auken, Kimberly, Wang, Daniel, Wang, Xiaodong, Williams, Gary, Wright, Adam, Yook, Karen, Berriman, Matthew, Kersey, Paul, Schedl, Tim, Stein, Lincoln, Sternberg, Paul W

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WormBase 2014: new views of curated biology von Harris, Todd W, Baran, Joachim, Bieri, Tamberlyn, Cabunoc, Abigail, Chan, Juancarlos, Chen, Wen J, Davis, Paul, Done, James, Grove, Christian, Howe, Kevin, Kishore, Ranjana, Lee, Raymond, Li, Yuling, Muller, Hans-Michael, Nakamura, Cecilia, Ozersky, Philip, Paulini, Michael, Raciti, Daniela, Schindelman, Gary, Tuli, Mary Ann, Van Auken, Kimberly, Wang, Daniel, Wang, Xiaodong, Williams, Gary, Wong, J D, Yook, Karen, Schedl, Tim, Hodgkin, Jonathan, Berriman, Matthew, Kersey, Paul, Spieth, John, Stein, Lincoln, Sternberg, Paul W

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Harmonizing model organism data in the Alliance of Genome Resources von Agapite, Julie, Albou, Laurent-Philippe, Aleksander, Suzanne A., Anagnostopoulos, Anna V., Antonazzo, Giulia, Argasinska, Joanna, Attrill, Helen, Becerra, Andrés, Bello, Susan M., Blake, Judith A., Blodgett, Olin, Bradford, Yvonne M., Bult, Carol J., Cain, Scott, Calvi, Brian R., Carbon, Seth, Chen, Wen J., Cho, Jaehyoung, Christie, Karen R., Crosby, Madeline A., Davis, Paul, da Veiga Beltrame, Eduardo, D’Eustachio, Peter, Diamantakis, Stavros, Dolan, Mary E., Douglass, Eric, Dunn, Barbara, Eagle, Anne, Engel, Stacia R., Foley, Saoirse, Frazer, Ken, Gao, Sibyl, Gondwe, Felix, Goodman, Josh, Sian Gramates, L., Grove, Christian A., Hale, Paul, Harris, Todd, Thomas Hayman, G., Hill, David P., Howe, Douglas G., Howe, Kevin L., Hu, Yanhui, Kaufman, Thomas C., Karra, Kalpana, Kishore, Ranjana, Kwitek, Anne E., Lee, Raymond, Longden, Ian, Luypaert, Manuel, MacPherson, Kevin A., Martin, Ryan, Marygold, Steven J., Matthews, Beverley, McAndrews, Monica S., Miyasato, Stuart, Motenko, Howie, Muller, Hans-Michael, Mungall, Christopher J., Muruganujan, Anushya, Mushayahama, Tremayne, Nalabolu, Harika S., Nash, Robert S., Ng, Patrick, Paulini, Michael, Perrimon, Norbert, Raciti, Daniela, Ramachandran, Sridhar, Richardson, Joel E., Gelbart, Susan Russo, Ruzicka, Leyla, Schaper, Kevin, Schindelman, Gary, Shimoyama, Mary, Shrivatsav, Ajay, Singer, Amy, Skrzypek, Marek, Smith, Constance M., Smith, Cynthia L., Smith, Jennifer R., Stein, Lincoln, Sternberg, Paul W., Tabone, Christopher J., Thota, Jyothi, Tomczuk, Monika, Tutaj, Marek A., Urbano, Jose-Maria, Van Auken, Kimberly, Van Slyke, Ceri E., Wang, Qinghua, Wang, Shur-Jen, Weng, Shuai, Westerfield, Monte, Williams, Gary, Wilming, Laurens G., Wong, Edith D., Yook, Karen, Zarowiecki, Magdalena, Zhou, Pinglei, Zytkovicz, Mark

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Using a Structural and Logics Systems Approach to Infer bHLH-DNA Binding Specificity Determinants von De Masi, Federico, Grove, Christian A, Vedenko, Anastasia, Alibés, Andreu, Gisselbrecht, Stephen S, Serrano, Luis, Bulyk, Martha Leonia, Walhout, Albertha J. M

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A Multi-Parameter Network Reveals Extensive Divergence Between C. elegans bHLH Transcription Factors von Grove, Christian A., de Masi, Federico, Barrasa, M. Inmaculada, Newburger, Daniel E., Alkema, Mark J., Bulyk, Martha L., Walhout, Albertha J.M.

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