Identification and characterisation of de novo germline structural variants in two commercial pig lines using trio-based whole genome sequencing von Steensma, Marije J, Lee, Y L, Bouwman, A C, Pita Barros, C, Derks, M F L, Bink, M C A M, Harlizius, B, Huisman, A E, Crooijmans, R P M A, Groenen, M A M, Mulder, H A, Rochus, C M

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First report on chicken genes and chromosomes 2000 von Schmid, M., Nanda, I., Guttenbach, M., Steinlein, C., Hoehn, M., Schartl, M., Haaf, T., Weigend, S., Fries, R., Buerstedde, J-M., Wimmers, K., Burt, D.W., Smith, J., A’Hara, S., Law, A., Griffin, D.K., Bumstead, N., Kaufman, J., Thomson, P.A., Burke, T., Groenen, M .A.M., Crooijmans, R.P.M.A., Vignal, A., Fillon, V., Morisson, M., Pitel, F., Tixier-Boichard, M., Ladjali-Mohammedi, K., Hillel, J., Mäki-Tanila, A., Cheng, H.H., Delany, M.E., Burnside, J., Mizuno, S.

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Genetic origin, admixture and population history of aurochs (Bos primigenius) and primitive European cattle von Upadhyay, M R, Chen, W, Lenstra, J A, Goderie, C R J, MacHugh, D E, Park, S D E, Magee, D A, Matassino, D, Ciani, F, Megens, H-J, van Arendonk, J A M, Groenen, M A M

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Symmetric expression of ohnologs encoding conserved antiviral responses in tetraploid common carp suggest absence of subgenome dominance after whole genome duplication von Blasweiler, A., Megens, H.-J., Goldman, M.R.G., Tadmor-Levi, R., Lighten, J., Groenen, M.A.M., Dirks, R.P., Jansen, H.J., Spaink, H.P., David, L., Boudinot, P., Wiegertjes, G.F.

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Accuracy of genomic prediction using imputed whole-genome sequence data in white layers von Heidaritabar, M., Calus, M.P.L., Megens, H-J., Vereijken, A., Groenen, M.A.M., Bastiaansen, J.W.M.

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A high‐density SNP chip for genotyping great tit (Parus major) populations and its application to studying the genetic architecture of exploration behaviour von Kim, J.‐M., Santure, A. W., Barton, H. J., Quinn, J. L., Cole, E. F., Visser, M. E., Sheldon, B. C., Groenen, M. A. M., van Oers, K., Slate, J.

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Genome‐wide population structure and admixture analysis reveals weak differentiation among Ugandan goat breeds von Onzima, R. B., Upadhyay, M. R., Mukiibi, R., Kanis, E., Groenen, M. A. M., Crooijmans, R. P. M. A.

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Genetic consequences of breaking migratory traditions in barnacle geese Branta leucopsis von Jonker, R. M., Kraus, R. H. S., Zhang, Q., van Hooft, P., Larsson, K., van der Jeugd, H. P., Kurvers, R. H. J. M., van Wieren, S. E., Loonen, M. J. J. E., Crooijmans, R. P. M. A., Ydenberg, R. C., Groenen, M. A. M., Prins, H. H. T.

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Genomic diversity and differentiation of a managed island wild boar population von Iacolina, L, Scandura, M, Goedbloed, D J, Alexandri, P, Crooijmans, R P M A, Larson, G, Archibald, A, Apollonio, M, Schook, L B, Groenen, M A M, Megens, H-J

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A natural knockout of the MYO7A gene leads to pre‐weaning mortality in pigs von Derks, M. F. L., Megens, H.‐J., Giacomini, W. L., Groenen, M. A. M., Lopes, M. S.

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Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates von van Oers, K, Santure, A W, De Cauwer, I, van Bers, N E M, Crooijmans, R P M A, Sheldon, B C, Visser, M E, Slate, J, Groenen, M A M

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Porcine colonization of the Americas: a 60k SNP story von Burgos-Paz, W, Souza, C A, Megens, H J, Ramayo-Caldas, Y, Melo, M, Lemús-Flores, C, Caal, E, Soto, H W, Martínez, R, Alvarez, L A, Aguirre, L, Iñiguez, V, Revidatti, M A, Martínez-López, O R, Llambi, S, Esteve-Codina, A, Rodríguez, M C, Crooijmans, R P M A, Paiva, S R, Schook, L B, Groenen, M A M, Pérez-Enciso, M

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Systematic differences in the response of genetic variation to pedigree and genome-based selection methods von Heidaritabar, M, Vereijken, A, Muir, W M, Meuwissen, T, Cheng, H, Megens, H-J, Groenen, M A M, Bastiaansen, J W M

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Identification of high utility SNPs for population assignment and traceability purposes in the pig using high‐throughput sequencing von Ramos, A. M, Megens, H. J, Crooijmans, R. P. M. A, Schook, L. B, Groenen, M. A. M

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SNP marker detection and genotyping in tilapia von Van BERS, N. E. M., CROOIJMANS, R. P. M. A., GROENEN, M. A. M., DIBBITS, B. W., KOMEN, J.

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Identification of species‐specific novel transcripts in pig reproductive tissues using RNA‐seq von Du, Z.‐Q, Eisley, C. J, Onteru, S. K, Madsen, O, Groenen, M. A. M, Ross, J. W, Rothschild, M. F

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Accuracy of genomic prediction using deregressed breeding values estimated from purebred and crossbred offspring phenotypes in pigs von Hidalgo, A M, Bastiaansen, J W M, Lopes, M S, Veroneze, R, Groenen, M A M, de Koning, D-J

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After genome-wide association studies: Gene networks elucidating candidate genes divergences for number of teats across two pig populations von Verardo, L L, Lopes, M S, Wijga, S, Madsen, O, Silva, F F, Groenen, M A M, Knol, E F, Lopes, P S, Guimarães, S E F

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Genome-wide scan for body composition in pigs reveals important role of imprinting von Koning, D.J. de, Rattink, A.P, Harlizius, B, Arendonk, J.A.M. van, Brascamp, E.W, Groenen, M.A.M

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East Asian contributions to Dutch traditional and western commercial chickens inferred from mtDNA analysis von Dana, N, Megens, H.-J, Crooijmans, R.P.M.A, Hanotte, O, Mwacharo, J, Groenen, M.A.M, van Arendonk, J.A.M

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