The structure, function and evolution of a complete human chromosome 8 von Logsdon, Glennis A., Vollger, Mitchell R., Hsieh, PingHsun, Mao, Yafei, Liskovykh, Mikhail A., Koren, Sergey, Nurk, Sergey, Mercuri, Ludovica, Dishuck, Philip C., Rhie, Arang, de Lima, Leonardo G., Dvorkina, Tatiana, Porubsky, David, Harvey, William T., Mikheenko, Alla, Bzikadze, Andrey V., Kremitzki, Milinn, Graves-Lindsay, Tina A., Jain, Chirag, Hoekzema, Kendra, Murali, Shwetha C., Munson, Katherine M., Baker, Carl, Sorensen, Melanie, Lewis, Alexandra M., Surti, Urvashi, Gerton, Jennifer L., Larionov, Vladimir, Ventura, Mario, Miga, Karen H., Phillippy, Adam M., Eichler, Evan E.

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Characterizing the Major Structural Variant Alleles of the Human Genome von Audano, Peter A., Sulovari, Arvis, Graves-Lindsay, Tina A., Cantsilieris, Stuart, Sorensen, Melanie, Welch, AnneMarie E., Dougherty, Max L., Nelson, Bradley J., Shah, Ankeeta, Dutcher, Susan K., Warren, Wesley C., Magrini, Vincent, McGrath, Sean D., Li, Yang I., Wilson, Richard K., Eichler, Evan E.

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Discovery and genotyping of structural variation from long-read haploid genome sequence data von Huddleston, John, Chaisson, Mark J P, Steinberg, Karyn Meltz, Warren, Wes, Hoekzema, Kendra, Gordon, David, Graves-Lindsay, Tina A, Munson, Katherine M, Kronenberg, Zev N, Vives, Laura, Peluso, Paul, Boitano, Matthew, Chin, Chen-Shin, Korlach, Jonas, Wilson, Richard K, Eichler, Evan E

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Reconstructing complex regions of genomes using long-read sequencing technology von Huddleston, John, Ranade, Swati, Malig, Maika, Antonacci, Francesca, Chaisson, Mark, Hon, Lawrence, Sudmant, Peter H, Graves, Tina A, Alkan, Can, Dennis, Megan Y, Wilson, Richard K, Turner, Stephen W, Korlach, Jonas, Eichler, Evan E

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Evolution of Human-Specific Neural SRGAP2 Genes by Incomplete Segmental Duplication von Dennis, Megan Y., Nuttle, Xander, Sudmant, Peter H., Antonacci, Francesca, Graves, Tina A., Nefedov, Mikhail, Rosenfeld, Jill A., Sajjadian, Saba, Malig, Maika, Kotkiewicz, Holland, Curry, Cynthia J., Shafer, Susan, Shaffer, Lisa G., de Jong, Pieter J., Wilson, Richard K., Eichler, Evan E.

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Complete Haplotype Sequence of the Human Immunoglobulin Heavy-Chain Variable, Diversity, and Joining Genes and Characterization of Allelic and Copy-Number Variation von Watson, Corey T., Steinberg, Karyn M., Huddleston, John, Warren, Rene L., Malig, Maika, Schein, Jacqueline, Willsey, A. Jeremy, Joy, Jeffrey B., Scott, Jamie K., Graves, Tina A., Wilson, Richard K., Holt, Robert A., Eichler, Evan E., Breden, Felix

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Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators von Bellott, Daniel W., Hughes, Jennifer F., Skaletsky, Helen, Brown, Laura G., Pyntikova, Tatyana, Cho, Ting-Jan, Koutseva, Natalia, Zaghlul, Sara, Graves, Tina, Rock, Susie, Kremitzki, Colin, Fulton, Robert S., Dugan, Shannon, Ding, Yan, Morton, Donna, Khan, Ziad, Lewis, Lora, Buhay, Christian, Wang, Qiaoyan, Watt, Jennifer, Holder, Michael, Lee, Sandy, Nazareth, Lynne, Alföldi, Jessica, Rozen, Steve, Muzny, Donna M., Warren, Wesley C., Gibbs, Richard A., Wilson, Richard K., Page, David C.

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Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content von Page, David C, Hughes, Jennifer F, Skaletsky, Helen, Pyntikova, Tatyana, Graves, Tina A, van Daalen, Saskia K. M, Minx, Patrick J, Fulton, Robert S, McGrath, Sean D, Locke, Devin P, Friedman, Cynthia, Trask, Barbara J, Mardis, Elaine R, Warren, Wesley C, Repping, Sjoerd, Rozen, Steve, Wilson, Richard K

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A new domestic cat genome assembly based on long sequence reads empowers feline genomic medicine and identifies a novel gene for dwarfism von Buckley, Reuben M., Davis, Brian W., Brashear, Wesley A., Farias, Fabiana H. G., Kuroki, Kei, Graves, Tina, Hillier, LaDeana W., Kremitzki, Milinn, Li, Gang, Middleton, Rondo P., Minx, Patrick, Tomlinson, Chad, Lyons, Leslie A., Murphy, William J., Warren, Wesley C.

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Avian W and mammalian Y chromosomes convergently retained dosage-sensitive regulators von Bellott, Daniel W, Skaletsky, Helen, Cho, Ting-Jan, Brown, Laura, Locke, Devin, Chen, Nancy, Galkina, Svetlana, Pyntikova, Tatyana, Koutseva, Natalia, Graves, Tina, Kremitzki, Colin, Warren, Wesley C, Clark, Andrew G, Gaginskaya, Elena, Wilson, Richard K, Page, David C

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Independent specialization of the human and mouse X chromosomes for the male germ line von Mueller, Jacob L, Skaletsky, Helen, Brown, Laura G, Zaghlul, Sara, Rock, Susan, Graves, Tina, Auger, Katherine, Warren, Wesley C, Wilson, Richard K, Page, David C

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Single haplotype assembly of the human genome from a hydatidiform mole von Steinberg, Karyn Meltz, Schneider, Valerie A, Graves-Lindsay, Tina A, Fulton, Robert S, Agarwala, Richa, Huddleston, John, Shiryev, Sergey A, Morgulis, Aleksandr, Surti, Urvashi, Warren, Wesley C, Church, Deanna M, Eichler, Evan E, Wilson, Richard K

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Sequencing the mouse Y chromosome reveals convergent gene acquisition and amplification on both sex chromosomes von Soh, Y Q Shirleen, Alföldi, Jessica, Pyntikova, Tatyana, Brown, Laura G, Graves, Tina, Minx, Patrick J, Fulton, Robert S, Kremitzki, Colin, Koutseva, Natalia, Mueller, Jacob L, Rozen, Steve, Hughes, Jennifer F, Owens, Elaine, Womack, James E, Murphy, William J, Cao, Qing, de Jong, Pieter, Warren, Wesley C, Wilson, Richard K, Skaletsky, Helen, Page, David C

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The physical and genetic framework of the maize B73 genome von Wei, Fusheng, Zhang, Jianwei, Zhou, Shiguo, He, Ruifeng, Schaeffer, Mary, Collura, Kristi, Kudrna, David, Faga, Ben P, Wissotski, Marina, Golser, Wolfgang, Rock, Susan M, Graves, Tina A, Fulton, Robert S, Coe, Ed, Schnable, Patrick S, Schwartz, David C, Ware, Doreen, Clifton, Sandra W, Wilson, Richard K, Wing, Rod A

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Modernizing reference genome assemblies von Church, Deanna M, Schneider, Valerie A, Graves, Tina, Auger, Katherine, Cunningham, Fiona, Bouk, Nathan, Chen, Hsiu-Chuan, Agarwala, Richa, McLaren, William M, Ritchie, Graham R S, Albracht, Derek, Kremitzki, Milinn, Rock, Susan, Kotkiewicz, Holland, Kremitzki, Colin, Wollam, Aye, Trani, Lee, Fulton, Lucinda, Fulton, Robert, Matthews, Lucy, Whitehead, Siobhan, Chow, Will, Torrance, James, Dunn, Matthew, Harden, Glenn, Threadgold, Glen, Wood, Jonathan, Collins, Joanna, Heath, Paul, Griffiths, Guy, Pelan, Sarah, Grafham, Darren, Eichler, Evan E, Weinstock, George, Mardis, Elaine R, Wilson, Richard K, Howe, Kerstin, Flicek, Paul, Hubbard, Tim

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Genomic Pathology of SLE-Associated Copy-Number Variation at the FCGR2C/FCGR3B/FCGR2B Locus von Mueller, Michael, Barros, Paula, Witherden, Abigail S., Roberts, Amy L., Zhang, Zhou, Schaschl, Helmut, Yu, Chack-Yung, Hurles, Matthew E., Schaffner, Catherine, Floto, R. Andres, Game, Laurence, Steinberg, Karyn Meltz, Wilson, Richard K., Graves, Tina A., Eichler, Evan E., Cook, H. Terence, Vyse, Timothy J., Aitman, Timothy J.

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Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes von Veyrunes, Frédéric, Waters, Paul D, Miethke, Pat, Rens, Willem, McMillan, Daniel, Alsop, Amber E, Grützner, Frank, Deakin, Janine E, Whittington, Camilla M, Schatzkamer, Kyriena, Kremitzki, Colin L, Graves, Tina, Ferguson-Smith, Malcolm A, Warren, Wes, Marshall Graves, Jennifer A

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A New Chicken Genome Assembly Provides Insight into Avian Genome Structure von Warren, Wesley C, Hillier, LaDeana W, Tomlinson, Chad, Minx, Patrick, Kremitzki, Milinn, Graves, Tina, Markovic, Chris, Bouk, Nathan, Pruitt, Kim D, Thibaud-Nissen, Francoise, Schneider, Valerie, Mansour, Tamer A, Brown, C Titus, Zimin, Aleksey, Hawken, Rachel, Abrahamsen, Mitch, Pyrkosz, Alexis B, Morisson, Mireille, Fillon, Valerie, Vignal, Alain, Chow, William, Howe, Kerstin, Fulton, Janet E, Miller, Marcia M, Lovell, Peter, Mello, Claudio V, Wirthlin, Morgan, Mason, Andrew S, Kuo, Richard, Burt, David W, Dodgson, Jerry B, Cheng, Hans H

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Palindromic GOLGA8 core duplicons promote chromosome 15q13.3 microdeletion and evolutionary instability von Antonacci, Francesca, Dennis, Megan Y, Huddleston, John, Sudmant, Peter H, Steinberg, Karyn Meltz, Rosenfeld, Jill A, Miroballo, Mattia, Graves, Tina A, Vives, Laura, Malig, Maika, Denman, Laura, Raja, Archana, Stuart, Andrew, Tang, Joyce, Munson, Brenton, Shaffer, Lisa G, Amemiya, Chris T, Wilson, Richard K, Eichler, Evan E

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Sequence analysis in Bos taurus reveals pervasiveness of X-Y arms races in mammalian lineages von Hughes, Jennifer F., Skaletsky, Helen, Pyntikova, Tatyana, Koutseva, Natalia, Raudsepp, Terje, Brown, Laura G., Bellott, Daniel W., Cho, Ting-Jan, Dugan-Rocha, Shannon, Khan, Ziad, Kremitzki, Colin, Fronick, Catrina, Graves-Lindsay, Tina A., Fulton, Lucinda, Warren, Wesley C., Wilson, Richard K., Owens, Elaine, Womack, James E., Murphy, William J., Muzny, Donna M., Worley, Kim C., Chowdhary, Bhanu P., Gibbs, Richard A., Page, David C.

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