Variables Influencing Differences in Sequence Conservation in the Fission Yeast Schizosaccharomyces pombe von Harnqvist, Simon Emanuel, Grace, Cooper Alastair, Jeffares, Daniel Charlton

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Parasite Genotype Is a Major Predictor of Mortality from Visceral Leishmaniasis von Grace, Cooper Alastair, Sousa Carvalho, Kátia Silene, Sousa Lima, Mayara Ingrid, Costa Silva, Vladimir, Reis-Cunha, João Luís, Brune, Matthew J, Forrester, Sarah, Pedrozo E Silva de Azevedo, Conceição de Maria, Costa, Dorcas Lamounier, Speed, Doug, Mottram, Jeremy C, Jeffares, Daniel C, Costa, Carlos H N

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Candidates for Balancing Selection in Leishmania donovani Complex Parasites von Grace, Cooper Alastair, Forrester, Sarah, Silva, Vladimir Costa, Carvalho, Kátia Silene Sousa, Kilford, Hannah, Chew, Yen Peng, James, Sally, Costa, Dorcas L, Mottram, Jeremy C, Costa, Carlos C H N, Jeffares, Daniel C

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Supplementary Material von Grace, Cooper Alastair

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LD decay for thinned data (Figure 4 of manuscript) and all data von Grace, Cooper Alastair

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QQ plots (Figure 2 of manuscript) von Grace, Cooper Alastair

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Heritability estimates (Figure 1 from manuscript) von Grace, Cooper Alastair

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GWAS Manhattan plots (Figure 3 of manuscript) von Grace, Cooper Alastair

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Supplementary Tables von Grace, Cooper Alastair

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GWAS treefile and nexus alignment for network analysis in SplitsTree von Grace, Cooper Alastair

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Alignment files of intergenic regions containing SNP/indels indicated by GWAS von Grace, Cooper Alastair

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Alignments of intergenic regions containing SNP/indel variants indicated by GWAS von Grace, Cooper Alastair

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Phylogenetic network image with isolate names von Grace, Cooper Alastair

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Pairwise linkage for each population von Grace, Cooper Alastair

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Linkage in 10kb windows around each balancing selection candidate von Grace, Cooper Alastair

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Phylogenetic trees of candidate balancing selection regions von Grace, Cooper Alastair

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Phylogeny treefile to accompany Figure 1 von Grace, Cooper Alastair

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Coverage vs Beta and NCD2 scores von Grace, Cooper Alastair

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Betascan2 scores for each population von Grace, Cooper Alastair

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NCD2 scores for each population von Grace, Cooper Alastair

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