Recombination in viruses: mechanisms, methods of study, and evolutionary consequences von Pérez-Losada, Marcos, Arenas, Miguel, Galán, Juan Carlos, Palero, Ferran, González-Candelas, Fernando

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SARS‐CoV‐2 RNA load in nasopharyngeal specimens from outpatients with breakthrough COVID‐19 due to Omicron BA.1 and BA.2 von Michelena, Paula, Olea, Beatriz, Torres, Ignacio, González‐Candelas, Fernando, Navarro, David

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Genetic determinants of host tropism in Klebsiella phages von Beamud, Beatriz, García-González, Neris, Gómez-Ortega, Mar, González-Candelas, Fernando, Domingo-Calap, Pilar, Sanjuan, Rafael

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One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads von Valiente-Mullor, Carlos, Beamud, Beatriz, Ansari, Ivan, Frances-Cuesta, Carlos, Garcia-Gonzalez, Neris, Mejia, Lorena, Ruiz-Hueso, Paula, Gonzalez-Candelas, Fernando

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Assessing the potential association between SARS‐CoV‐2 RNA load in the respiratory tract and COVID‐19 mortality von Albert, Eliseo, Bracho, Maria Alma, Serrano, Alicia, Ferrer, Blanca, González‐Candelas, Fernando, Navarro, David

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Effect of Ribavirin on the Mutation Rate and Spectrum of Hepatitis C Virus In Vivo von CUEVAS, José M, GONZALEZ-CANDELAS, Fernando, MOYA, Andrés, SANJUAN, Rafael

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Isolation and Characterization of Two Klebsiella pneumoniae Phages Encoding Divergent Depolymerases von Domingo-Calap, Pilar, Beamud, Beatriz, Mora-Quilis, Lucas, Gonzalez-Candelas, Fernando, Sanjuan, Rafael

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Whole Genome Sequencing Analysis of Intrapatient Microevolution in Mycobacterium tuberculosis: Potential Impact on the Inference of Tuberculosis Transmission von Pérez-Lago, Laura, Comas, Iñaki, Navarro, Yurena, González-Candelas, Fernando, Herranz, Malta, Bouza, Emilio, Garcia-de-Viedma, Darío

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Molecular characterization of Treponema pallidum subsp. pallidum in Switzerland and France with a new multilocus sequence typing scheme von Grillová, Linda, Bawa, Tanika, Mikalová, Lenka, Gayet-Ageron, Angèle, Nieselt, Kay, Strouhal, Michal, Sednaoui, Patrice, Ferry, Tristan, Cavassini, Matthias, Lautenschlager, Stephan, Dutly, Fabrizio, Pla-Díaz, Marta, Krützen, Michael, González-Candelas, Fernando, Bagheri, Homayoun C, Šmajs, David, Arora, Natasha, Bosshard, Philipp P

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Comprehensive Screening for Naturally Occurring Hepatitis C Virus Resistance to Direct-Acting Antivirals in the NS3, NS5A, and NS5B Genes in Worldwide Isolates of Viral Genotypes 1... von Patiño-Galindo, Juan Ángel, Salvatierra, Karina, González-Candelas, Fernando, López-Labrador, F Xavier

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Enterovirus co-infections and onychomadesis after hand, foot, and mouth disease, Spain, 2008 von Bracho, Maria A, González-Candelas, Fernando, Valero, Ana, Córdoba, Juan, Salazar, Antonio

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Domain Organization and Evolution of Multifunctional Autoprocessing Repeats-in-Toxin (MARTX) Toxin in Vibrio vulnificus von Roig, Francisco J, González-Candelas, Fernando, Amaro, Carmen

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Listeria monocytogenes , a silent foodborne pathogen in Ecuador von Mejía, Lorena, Espinosa-Mata, Estefanía, Freire, Ana Lucía, Zapata, Sonia, González-Candelas, Fernando

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Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex von Chiner-Oms, Álvaro, Berney, Michael, Boinett, Christine, González-Candelas, Fernando, Young, Douglas B., Gagneux, Sebastien, Jacobs, William R., Parkhill, Julian, Cortes, Teresa, Comas, Iñaki

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Isolation of Four Lytic Phages Infecting Klebsiella pneumoniae K22 Clinical Isolates from Spain von Domingo-Calap, Pilar, Beamud, Beatriz, Vienne, Justine, Gonzalez-Candelas, Fernando, Sanjuan, Rafael

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The population genetics and evolutionary epidemiology of RNA viruses von Moya, Andrés, Holmes, Edward C, González-Candelas, Fernando

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Evolutionary trajectories of beta-lactamase CTX-M-1 cluster enzymes: predicting antibiotic resistance von Novais, Angela, Comas, Iñaki, Baquero, Fernando, Cantón, Rafael, Coque, Teresa M, Moya, Andrés, González-Candelas, Fernando, Galán, Juan-Carlos

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Incidence and molecular epidemiology of hepatitis C virus reinfection in prisons in Catalonia, Spain (Re-HCV study) von Saludes, Verónica, Bordoy, Antoni E., Yela, Elena, Turú, Elisabet, Not, Anna, López-Corbeto, Evelin, Egea-Cortés, Laia, González-Candelas, Fernando, Casabona, Jordi, Marco, Andrés, Martró, Elisa

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Hepatitis C virus early kinetics and resistance‐associated substitution dynamics during antiviral therapy with direct‐acting antivirals von Perpiñán, Elena, Caro‐Pérez, Noelia, García‐González, Neris, Gregori, Josep, González, Patricia, Bartres, Concepción, Soria, Maria Eugenia, Perales, Celia, Lens, Sabela, Mariño, Zoe, Londoño, María Carlota, Ariza, Xavier, Koutsoudakis, George, Quer, Josep, González‐Candelas, Fernando, Forns, Xavier, Pérez‐del‐Pulgar, Sofía

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Genotypic and phenotypic characterisation of a nosocomial outbreak of Candida auris in Spain during 5 years von Mulet‐Bayona, Juan Vicente, Cancino‐Muñoz, Irving, Salvador‐García, Carme, Tormo‐Palop, Nuria, Guna‐Serrano, María del Remedio, Ferrer‐Gómez, Carolina, Melero‐García, Mercedes, González‐Candelas, Fernando, Gimeno‐Cardona, Concepción

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