Interactions between RNA polymerase and the "core recognition element" counteract pausing von Vvedenskaya, Irina O., Vahedian-Movahed, Hanif, Bird, Jeremy G., Knoblauch, Jared G., Goldman, Seth R., Zhang, Yu, Ebright, Richard H., Nickels, Bryce E.

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Massively Systematic Transcript End Readout, “MASTER”: Transcription Start Site Selection, Transcriptional Slippage, and Transcript Yields von Vvedenskaya, Irina O., Zhang, Yuanchao, Goldman, Seth R., Valenti, Anna, Visone, Valeria, Taylor, Deanne M., Ebright, Richard H., Nickels, Bryce E.

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A ubiquitous disordered protein interaction module orchestrates transcription elongation von Cermakova, Katerina, Demeulemeester, Jonas, Lux, Vanda, Nedomova, Monika, Goldman, Seth R., Smith, Eric A., Srb, Pavel, Hexnerova, Rozalie, Fabry, Milan, Madlikova, Marcela, Horejsi, Magdalena, De Rijck, Jan, Debyser, Zeger, Adelman, Karen, Hodges, H. Courtney, Veverka, Vaclav

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NanoRNAs Prime Transcription Initiation In Vivo von Goldman, Seth R., Sharp, Josh S., Vvedenskaya, Irina O., Livny, Jonathan, Dove, Simon L., Nickels, Bryce E.

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Decoding the epigenetics and chromatin loop dynamics of androgen receptor-mediated transcription von Altıntaş, Umut Berkay, Seo, Ji-Heui, Giambartolomei, Claudia, Ozturan, Dogancan, Fortunato, Brad J., Nelson, Geoffrey M., Goldman, Seth R., Adelman, Karen, Hach, Faraz, Freedman, Matthew L., Lack, Nathan A.

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A Conserved Pattern of Primer-Dependent Transcription Initiation in Escherichia coli and Vibrio cholerae Revealed by 5' RNA-seq von Druzhinin, Sergey Y, Tran, Ngat T, Skalenko, Kyle S, Goldman, Seth R, Knoblauch, Jared G, Dove, Simon L, Nickels, Bryce E

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The primary σ factor in Escherichia coli can access the transcription elongation complex from solution in vivo von Goldman, Seth R, Nair, Nikhil U, Wells, Christopher D, Nickels, Bryce E, Hochschild, Ann

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Differential Regulation by Magnesium of the Two MsbB Paralogs of Shigella flexneri von GOLDMAN, Seth R, YUPENG TU, GOLDBERG, Marcia B

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Negative elongation factor regulates muscle progenitor expansion for efficient myofiber repair and stem cell pool repopulation von Robinson, Daniel C.L., Ritso, Morten, Nelson, Geoffrey M., Mokhtari, Zeinab, Nakka, Kiran, Bandukwala, Hina, Goldman, Seth R., Park, Peter J., Mounier, Rémi, Chazaud, Bénédicte, Brand, Marjorie, Rudnicki, Michael A., Adelman, Karen, Dilworth, F. Jeffrey

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Inherited blood cancer predisposition through altered transcription elongation von Zhao, Jiawei, Cato, Liam D., Arora, Uma P., Bao, Erik L., Bryant, Samuel C., Williams, Nicholas, Jia, Yuemeng, Goldman, Seth R., Nangalia, Jyoti, Erb, Michael A., Vos, Seychelle M., Armstrong, Scott A., Sankaran, Vijay G.

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Rapid unleashing of macrophage efferocytic capacity via transcriptional pause release von Tufan, Turan, Comertpay, Gamze, Villani, Ambra, Nelson, Geoffrey M., Terekhova, Marina, Kelley, Shannon, Zakharov, Pavel, Ellison, Rochelle M., Shpynov, Oleg, Raymond, Michael, Sun, Jerry, Chen, Yitan, Bockelmann, Enno, Stremska, Marta, Peterson, Lance W., Boeckaerts, Laura, Goldman, Seth R., Etchegaray, J. Iker, Artyomov, Maxim N., Peri, Francesca, Ravichandran, Kodi S.

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PRO‐seq: Precise Mapping of Engaged RNA Pol II at Single‐Nucleotide Resolution von Mimoso, Claudia A., Goldman, Seth R.

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Analysis of Bacterial Transcription by "Massively Systematic Transcript End Readout," MASTER von Vvedenskaya, Irina O, Goldman, Seth R, Nickels, Bryce E

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Direct Detection of Abortive RNA Transcripts in Vivo von Goldman, Seth R, Ebright, Richard H, Nickels, Bryce E

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Preparation of cDNA Libraries for High-Throughput RNA Sequencing Analysis of RNA 5′ Ends von Vvedenskaya, Irina O., Goldman, Seth R., Nickels, Bryce E.

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Regulation of IcsP, the Outer Membrane Protease of the Shigella Actin Tail Assembly Protein IcsA, by Virulence Plasmid Regulators VirF and VirB von WING, Helen J, YAN, Arthur W, GOLDMAN, Seth R, GOLDBERG, Marcia B

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Growth phase-dependent control of transcription start site selection and gene expression by nanoRNAs von Vvedenskaya, Irina O, Sharp, Josh S, Goldman, Seth R, Kanabar, Pinal N, Livny, Jonathan, Dove, Simon L, Nickels, Bryce E

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Modulation of an Outer Membrane Protease Contributes to the Virulence Defect of Shigella flexneri Strains Carrying a Mutation in the virK Locus von Wing, Helen J, Goldman, Seth R, Ally, Shabeen, Goldberg, Marcia B

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Rapid unleashing of macrophage efferocytic capacity via transcriptional pause release von Tufan, Turan, Comertpay, Gamze, Villani, Ambra, Nelson, Geoffrey M, Terekhova, Marina, Kelley, Shannon, Zakharov, Pavel, Ellison, Rochelle M, Shpynov, Oleg, Raymond, Michael, Sun, Jerry, Chen, Yitan, Bockelmann, Enno, Stremska, Marta, Peterson, Lance W, Boeckaerts, Laura, Goldman, Seth R, Etchegaray, J Iker, Artyomov, Maxim N, Peri, Francesca, Ravichandran, Kodi S

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A ubiquitous disordered protein interaction module orchestrates transcription elongation von Cermakova, Katerina, Demeulemeester, Jonas, Lux, Vanda, Nedomova, Monika, Goldman, Seth R, Smith, Eric A, Srb, Pavel, Hexnerova, Rozalie, Fabry, Milan, Madlikova, Marcela, Horejsi, Magdalena, De Rijck, Jan, Debyser, Zeger, Adelman, Karen, Hodges, H. Courtney, Veverka, Vaclav

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