Phandango: an interactive viewer for bacterial population genomics von Hadfield, James, Croucher, Nicholas J, Goater, Richard J, Abudahab, Khalil, Aanensen, David M, Harris, Simon R

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Microreact: visualizing and sharing data for genomic epidemiology and phylogeography von Argimón, Silvia, Abudahab, Khalil, Goater, Richard J E, Fedosejev, Artemij, Bhai, Jyothish, Glasner, Corinna, Feil, Edward J, Holden, Matthew T G, Yeats, Corin A, Grundmann, Hajo, Spratt, Brian G, Aanensen, David M

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A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch von Argimón, Silvia, Yeats, Corin A., Goater, Richard J., Abudahab, Khalil, Taylor, Benjamin, Underwood, Anthony, Sánchez-Busó, Leonor, Wong, Vanessa K., Dyson, Zoe A., Nair, Satheesh, Park, Se Eun, Marks, Florian, Page, Andrew J., Keane, Jacqueline A., Baker, Stephen, Holt, Kathryn E., Dougan, Gordon, Aanensen, David M.

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A community-driven resource for genomic epidemiology and antimicrobial resistance prediction of Neisseria gonorrhoeae at Pathogenwatch von Sánchez-Busó, Leonor, Yeats, Corin A, Taylor, Benjamin, Goater, Richard J, Underwood, Anthony, Abudahab, Khalil, Argimón, Silvia, Ma, Kevin C, Mortimer, Tatum D, Golparian, Daniel, Cole, Michelle J, Grad, Yonatan H, Martin, Irene, Raphael, Brian H, Shafer, William M, Town, Katy, Wi, Teodora, Harris, Simon R, Unemo, Magnus, Aanensen, David M

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Public health surveillance of multidrug-resistant clones of Neisseria gonorrhoeae in Europe: a genomic survey von Harris, Simon R, Cole, Michelle J, Spiteri, Gianfranco, Sánchez-Busó, Leonor, Golparian, Daniel, Jacobsson, Susanne, Goater, Richard, Abudahab, Khalil, Yeats, Corin A, Bercot, Beatrice, Borrego, Maria José, Crowley, Brendan, Stefanelli, Paola, Tripodo, Francesco, Abad, Raquel, Aanensen, David M, Unemo, Magnus, Azevedo, Jacinta, Balla, Eszter, Barbara, Christopher, Bergheim, Thea, Borrego, Maria José, Bremer, Viviane, Buder, Susanne, Maikanti-Charalambous, Panayiota, Chisholm, Stephanie, Cowan, Susan, Crowley, Brendan, Crucitti, Tania, Diez, Mercedes, Dudás, Mária, Eastick, Kirstine, Goubard, Agathe, Haller, Maria, Hauksdóttir, Guôrún Svanborg, Hoffmann, Steen, Hughes, Gwenda, Igoe, Derval, Jeverica, Samo, Klavs, Irena, Kløvstad, Hilde, Kohl, Peter, Konte, Vasileia, Linde, Ineke, Mavcutko, Violeta, Melillo, Jackie Maistre, Pakarna, Gatis, Pavlik, Peter, Pieridou, Despo, La Ruche, Guy, Sigmundsdóttir, Guôrún, Soteriou, Soteroulla, Stary, Angelika, Stefanelli, Paola, Suligoi, Barbara, Truska, Peter, Tzelepi, Eva, Unemo, Magnus, Van Benthem, Birgit, Van Dam, Alje, Vazquez, Julio, Velicko, Inga, Verbrugge, Ruth

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Whole-Genome Sequencing for Routine Pathogen Surveillance in Public Health: a Population Snapshot of Invasive Staphylococcus aureus in Europe von Aanensen, David M, Feil, Edward J, Holden, Matthew T G, Dordel, Janina, Yeats, Corin A, Fedosejev, Artemij, Goater, Richard, Castillo-Ramírez, Santiago, Corander, Jukka, Colijn, Caroline, Chlebowicz, Monika A, Schouls, Leo, Heck, Max, Pluister, Gerlinde, Ruimy, Raymond, Kahlmeter, Gunnar, Åhman, Jenny, Matuschek, Erika, Friedrich, Alexander W, Parkhill, Julian, Bentley, Stephen D, Spratt, Brian G, Grundmann, Hajo

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Genomic reconstruction of the SARS-CoV-2 epidemic in England von Vöhringer, Harald S., Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V., Gonçalves, Sonia, Jackson, David K., Johnston, Ian, Jung, Alexander W., Saint, Callum, Sillitoe, John, Suciu, Maria, Goldman, Nick, Panovska-Griffiths, Jasmina, Birney, Ewan, Volz, Erik, Funk, Sebastian, Kwiatkowski, Dominic, Chand, Meera, Martincorena, Inigo, Barrett, Jeffrey C., Gerstung, Moritz

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Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread von David, Sophia, Reuter, Sandra, Harris, Simon R., Glasner, Corinna, Feltwell, Theresa, Argimon, Silvia, Abudahab, Khalil, Goater, Richard, Giani, Tommaso, Errico, Giulia, Aspbury, Marianne, Sjunnebo, Sara, Feil, Edward J., Rossolini, Gian Maria, Aanensen, David M., Grundmann, Hajo

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Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch von Argimón, Silvia, David, Sophia, Underwood, Anthony, Abrudan, Monica, Wheeler, Nicole E, Kekre, Mihir, Abudahab, Khalil, Yeats, Corin A, Goater, Richard, Taylor, Ben, Harste, Harry, Muddyman, Dawn, Feil, Edward J, Brisse, Sylvain, Holt, Kathryn, Donado-Godoy, Pilar, Ravikumar, K L, Okeke, Iruka N, Carlos, Celia, Aanensen, David M

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Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch von Argimón, Silvia, David, Sophia, Underwood, Anthony, Abrudan, Monica, Wheeler, Nicole E, Kekre, Mihir, Abudahab, Khalil, Yeats, Corin A, Goater, Richard, Taylor, Ben, Harste, Harry, Muddyman, Dawn, Feil, Edward J, Brisse, Sylvain, Holt, Kathryn, Donado-Godoy, Pilar, Ravikumar, KL, Okeke, Iruka N, Carlos, Celia, Aanensen, David M, NIHR Global Health Research Unit on Genomic Surveillance of Anti

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A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch von Argimón, Silvia, Yeats, Corin A, Goater, Richard J, Abudahab, Khalil, Taylor, Benjamin, Underwood, Anthony, Sánchez-Busó, Leonor, Wong, Vanessa K, Dyson, Zoe A, Nair, Satheesh, Park, Se Eun, Marks, Florian, Page, Andrew J, Keane, Jacqueline A, Baker, Stephen, Holt, Kathryn E, Dougan, Gordon, Aanensen, David M

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Genomic reconstruction of the SARS-CoV-2 epidemic in England von Vöhringer, Harald S, Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V, Gonçalves, Sonia, Jackson, David K, Johnston, Ian, Jung, Alexander W, Saint, Callum, Sillitoe, John, Suciu, Maria, Goldman, Nick, Panovska-Griffiths, Jasmina, Wellcome Sanger Institute COVID-19 Surveillance Team, COVID-19 Genomics UK (COG-UK) Consortium, Birney, Ewan, Volz, Erik, Funk, Sebastian, Kwiatkowski, Dominic, Chand, Meera, Martincorena, Inigo, Barrett, Jeffrey C, Gerstung, Moritz

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Publisher Correction: Genomic reconstruction of the SARS CoV-2 epidemic in England von Vöhringer, Harald S., Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V., Gonçalves, Sonia, Jackson, David K., Johnston, Ian, Jung, Alexander W., Saint, Callum, Sillitoe, John, Suciu, Maria, Goldman, Nick, Panovska-Griffiths, Jasmina, Birney, Ewan, Volz, Erik, Funk, Sebastian, Kwiatkowski, Dominic, Chand, Meera, Martincorena, Inigo, Barrett, Jeffrey C., Gerstung, Moritz

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Public health surveillance of multidrug-resistant clones of Neisseria gonorrhoeae in Europe: a genomic survey von Harris, Simon R, Cole, Michelle J, Spiteri, Gianfranco, Sánchez-Busó, Leonor, Golparian, Daniel, Jacobsson, Susanne, Goater, Richard, Abudahab, Khalil, Yeats, Corin A, Bercot, Beatrice, Borrego, Maria José, Crowley, Brendan, Stefanelli, Paola, Tripodo, Francesco, Abad, Raquel, Aanensen, David M, Unemo, Magnus, Euro-GASP study group

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Globetrotting strangles: the unbridled national and international transmission of Streptococcus equi between horses

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Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates von Gladstone, Rebecca A, Lo, Stephanie W, Goater, Richard, Yeats, Corin, Taylor, Ben, Hadfield, James, Lees, John A, Croucher, Nicholas J, van Tonder, Andries J, Bentley, Leon J, Quah, Fu Xiang, Blaschke, Anne J, Pershing, Nicole L, Byington, Carrie L, Balaji, Veeraraghavan, Hryniewicz, Waleria, Sigauque, Betuel, Ravikumar, K L, Almeida, Samanta Cristine Grassi, Ochoa, Theresa J, Ho, Pak Leung, du Plessis, Mignon, Ndlangisa, Kedibone M, Cornick, Jennifer E, Kwambana-Adams, Brenda, Benisty, Rachel, Nzenze, Susan A, Madhi, Shabir A, Hawkins, Paulina A, Pollard, Andrew J, Everett, Dean B, Antonio, Martin, Dagan, Ron, Klugman, Keith P, von Gottberg, Anne, Metcalf, Benjamin J, Li, Yuan, Beall, Bernard W, McGee, Lesley, Breiman, Robert F, Aanensen, David M, Bentley, Stephen D, The Global Pneumococcal Sequencing Consortium

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Globetrotting strangles: the unbridled national and international transmission of Streptococcus equi between horses von Mitchell, Catriona, Steward, Karen F, Charbonneau, Amelia R L, Walsh, Saoirse, Wilson, Hayley, Timoney, John F, Wernery, Ulli, Joseph, Marina, Craig, David, van Maanen, Kees, Hoogkamer-van Gennep, Annelies, Leon, Albertine, Witkowski, Lucjan, Rzewuska, Magdalena, Stefańska, Ilona, Żychska, Monika, van Loon, Gunther, Cursons, Ray, Patty, Olivia, Acke, Els, Gilkerson, James R, El-Hage, Charles, Allen, Joanne, Bannai, Hiroshi, Kinoshita, Yuta, Niwa, Hidekazu, Becú, Teótimo, Pringle, John, Guss, Bengt, Böse, Reinhard, Abbott, Yvonne, Katz, Lisa, Leggett, Bernadette, Buckley, Tom C, Blum, Shlomo E, Cruz López, Fátima, Fernández Ros, Ana, Marotti Campi, Maria Cristina, Preziuso, Silvia, Robinson, Carl, Newton, J Richard, Schofield, Ellen, Brooke, Ben, Boursnell, Mike, de Brauwere, Nicolas, Kirton, Roxane, Barton, Charlotte K, Abudahab, Khalil, Taylor, Ben, Yeats, Corin A, Goater, Richard, Aanensen, David M, Harris, Simon R, Parkhill, Julian, Holden, Matthew T G, Waller, Andrew S

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Globetrotting strangles : the unbridled national and international transmission of Streptococcus equi between horses von Mitchell, Catriona, Steward, Karen F, Charbonneau, Amelia R. L, Walsh, Saoirse, Wilson, Hayley, Timoney, John F, Wernery, Ulli, Joseph, Marina, Craig, David, van Maanen, Kees, Hoogkamer-van Gennep, Annelies, Leon, Albertine, Witkowski, Lucjan, Rzewuska, Magdalena, Stefańska, Ilona, Żychska, Monika, van Loon, Gunther, Cursons, Ray, Patty, Olivia, Acke, Els, Gilkerson, James R, El-Hage, Charles, Allen, Joanne, Bannai, Hiroshi, Kinoshita, Yuta, Niwa, Hidekazu, Becú, Teótimo, Pringle, John, Guss, Bengt, Böse, Reinhard, Abbott, Yvonne, Katz, Lisa, Leggett, Bernadette, Buckley, Tom C, Blum, Shlomo E, Cruz López, Fátima, Fernández Ros, Ana, Marotti Campi, Maria Cristina, Preziuso, Silvia, Robinson, Carl, Newton, J. Richard, Schofield, Ellen, Brooke, Ben, Boursnell, Mike, de Brauwere, Nicolas, Kirton, Roxane, Barton, Charlotte K, Abudahab, Khalil, Taylor, Ben, Yeats, Corin A, Goater, Richard, Aanensen, David M, Harris, Simon R, Parkhill, Julian, Holden, Matthew T. G, Waller, Andrew S

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Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates von Gladstone, Rebecca A, Lo, Stephanie W, Goater, Richard, Yeats, Corin, Taylor, Ben, Hadfield, James, Lees, John A, Croucher, Nicholas J, van Tonder, Andries J, Bentley, Leon J, Quah, Fu Xiang, Blaschke, Anne J, Pershing, Nicole L, Byington, Carrie L, Balaji, Veeraraghavan, Hryniewicz, Waleria, Sigauque, Betuel, Ravikumar, KL, Almeida, Samanta Cristine Grassi, Ochoa, Theresa J, Ho, Pak Leung, du Plessis, Mignon, Ndlangisa, Kedibone M, Cornick, Jennifer E, Kwambana-Adams, Brenda, Benisty, Rachel, Nzenze, Susan A, Madhi, Shabir A, Hawkins, Paulina A, Pollard, Andrew J, Everett, Dean B, Antonio, Martin, Dagan, Ron, Klugman, Keith P, von Gottberg, Anne, Metcalf, Benjamin J, Li, Yuan, Beall, Bernard W, McGee, Lesley, Breiman, Robert F, Aanensen, David M, Bentley, Stephen D, The Global Pneumococcal Sequencing Consortium

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Genomic reconstruction of the SARS-CoV-2 epidemic in England von Vöhringer, Harald S, Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank

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