Characterization of Human Cyclin-Dependent Kinase 12 (CDK12) and CDK13 Complexes in C-Terminal Domain Phosphorylation, Gene Transcription, and RNA Processing von Liang, Kaiwei, Gao, Xin, Gilmore, Joshua M., Florens, Laurence, Washburn, Michael P., Smith, Edwin, Shilatifard, Ali

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The SOX2-interactome in brain cancer cells identifies the requirement of MSI2 and USP9X for the growth of brain tumor cells von Cox, Jesse L, Wilder, Phillip J, Gilmore, Joshua M, Wuebben, Erin L, Washburn, Michael P, Rizzino, Angie

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SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes von Brannan, Kristopher W., Jin, Wenhao, Huelga, Stephanie C., Banks, Charles A.S., Gilmore, Joshua M., Florens, Laurence, Washburn, Michael P., Van Nostrand, Eric L., Pratt, Gabriel A., Schwinn, Marie K., Daniels, Danette L., Yeo, Gene W.

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Therapeutic Targeting of MLL Degradation Pathways in MLL-Rearranged Leukemia von Liang, Kaiwei, Volk, Andrew G., Haug, Jeffrey S., Marshall, Stacy A., Woodfin, Ashley R., Bartom, Elizabeth T., Gilmore, Joshua M., Florens, Laurence, Washburn, Michael P., Sullivan, Kelly D., Espinosa, Joaquin M., Cannova, Joseph, Zhang, Jiwang, Smith, Edwin R., Crispino, John D., Shilatifard, Ali

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Topological scoring of protein interaction networks von Sardiu, Mihaela E., Gilmore, Joshua M., Groppe, Brad D., Dutta, Arnob, Florens, Laurence, Washburn, Michael P.

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N-Terminal Protein Modification through a Biomimetic Transamination Reaction von Gilmore, Joshua M., Scheck, Rebecca A., Esser-Kahn, Aaron P., Joshi, Neel S., Francis, Matthew B.

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Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes von Lee, Kenneth K, Sardiu, Mihaela E, Swanson, Selene K, Gilmore, Joshua M, Torok, Michael, Grant, Patrick A, Florens, Laurence, Workman, Jerry L, Washburn, Michael P

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Proteomic Analysis of Sox2‐Associated Proteins During Early Stages of Mouse Embryonic Stem Cell Differentiation Identifies Sox21 as a Novel Regulator of Stem Cell Fate von Mallanna, Sunil K., Ormsbee, Briana D., Iacovino, Michelina, Gilmore, Joshua M., Cox, Jesse L., Kyba, Michael, Washburn, Michael P., Rizzino, Angie

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Different phosphoisoforms of RNA polymerase II engage the Rtt103 termination factor in a structurally analogous manner von Nemec, Corey M., Yang, Fan, Gilmore, Joshua M., Hintermair, Corinna, Ho, Yi-Hsuan, Tseng, Sandra C., Heidemann, Martin, Zhang, Ying, Florens, Laurence, Gasch, Audrey P., Eick, Dirk, Washburn, Michael P., Varani, Gabriele, Ansari, Aseem Z.

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WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage von Gilmore, Joshua M, Sardiu, Mihaela E, Groppe, Brad D, Thornton, Janet L, Liu, Xingyu, Dayebgadoh, Gerald, Banks, Charles A, Slaughter, Brian D, Unruh, Jay R, Workman, Jerry L, Florens, Laurence, Washburn, Michael P

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Assembly of the Elongin A Ubiquitin Ligase Is Regulated by Genotoxic and Other Stresses von Weems, Juston C., Slaughter, Brian D., Unruh, Jay R., Hall, Shawn M., McLaird, Merry B., Gilmore, Joshua M., Washburn, Michael P., Florens, Laurence, Yasukawa, Takashi, Aso, Teijiro, Conaway, Joan W., Conaway, Ronald C.

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Chromatin remodeller Fun30Fft3 induces nucleosome disassembly to facilitate RNA polymerase II elongation von Lee, Junwoo, Shik Choi, Eun, David Seo, Hogyu, Kang, Keunsoo, Gilmore, Joshua M., Florens, Laurence, Washburn, Michael P., Choe, Joonho, Workman, Jerry L., Lee, Daeyoup

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Determining protein complex connectivity using a probabilistic deletion network derived from quantitative proteomics von Sardiu, Mihaela E, Gilmore, Joshua M, Carrozza, Michael J, Li, Bing, Workman, Jerry L, Florens, Laurence, Washburn, Michael P

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Advances in shotgun proteomics and the analysis of membrane proteomes von Gilmore, Joshua M., Washburn, Michael P.

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Multidimensional Separations-Based Shotgun Proteomics von Fournier, Marjorie L, Gilmore, Joshua M, Martin-Brown, Skylar A, Washburn, Michael P

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Identification of Topological Network Modules in Perturbed Protein Interaction Networks von Sardiu, Mihaela E., Gilmore, Joshua M., Groppe, Brad, Florens, Laurence, Washburn, Michael P.

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Rtr1 Is a CTD Phosphatase that Regulates RNA Polymerase II during the Transition from Serine 5 to Serine 2 Phosphorylation von Mosley, Amber L., Pattenden, Samantha G., Carey, Michael, Venkatesh, Swaminathan, Gilmore, Joshua M., Florens, Laurence, Workman, Jerry L., Washburn, Michael P.

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Determination of Protein Interactome of Transcription Factor Sox2 in Embryonic Stem Cells Engineered for Inducible Expression of Four Reprogramming Factors von Gao, Zhiguang, Cox, Jesse L., Gilmore, Joshua M., Ormsbee, Briana D., Mallanna, Sunil K., Washburn, Michael P., Rizzino, Angie

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FGF2 Antiproliferative Stimulation Induces Proteomic Dynamic Changes and High Expression of FOSB and JUNB in K‐Ras‐Driven Mouse Tumor Cells von Vitorino, Francisca Nathalia de Luna, Montoni, Fabio, Moreno, Jaqueline Neves, Souza, Bruno Ferreira, Lopes, Mariana de Camargo, Cordeiro, Barbara, Fonseca, Cecilia Sella, Gilmore, Joshua M., Sardiu, Mihaela I., Reis, Marcelo Silva, Florens, Laurence A., Washburn, Michael P., Armelin, Hugo Aguirre, da Cunha, Julia Pinheiro Chagas

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Suberoylanilide Hydroxamic Acid (SAHA)-Induced Dynamics of a Human Histone Deacetylase Protein Interaction Network von Sardiu, Mihaela E., Smith, Karen T., Groppe, Brad D., Gilmore, Joshua M., Saraf, Anita, Egidy, Rhonda, Peak, Allison, Seidel, Chris W., Florens, Laurence, Workman, Jerry L., Washburn, Michael P.

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