SIRT5 Regulates both Cytosolic and Mitochondrial Protein Malonylation with Glycolysis as a Major Target von Nishida, Yuya, Rardin, Matthew J., Carrico, Chris, He, Wenjuan, Sahu, Alexandria K., Gut, Philipp, Najjar, Rami, Fitch, Mark, Hellerstein, Marc, Gibson, Bradford W., Verdin, Eric

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Structural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylation von Kuhn, Misty L, Zemaitaitis, Bozena, Hu, Linda I, Sahu, Alexandria, Sorensen, Dylan, Minasov, George, Lima, Bruno P, Scholle, Michael, Mrksich, Milan, Anderson, Wayne F, Gibson, Bradford W, Schilling, Birgit, Wolfe, Alan J

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SIRT5 Regulates the Mitochondrial Lysine Succinylome and Metabolic Networks von Rardin, Matthew J., He, Wenjuan, Nishida, Yuya, Newman, John C., Carrico, Chris, Danielson, Steven R., Guo, Ailan, Gut, Philipp, Sahu, Alexandria K., Li, Biao, Uppala, Radha, Fitch, Mark, Riiff, Timothy, Zhu, Lei, Zhou, Jing, Mulhern, Daniel, Stevens, Robert D., Ilkayeva, Olga R., Newgard, Christopher B., Jacobson, Matthew P., Hellerstein, Marc, Goetzman, Eric S., Gibson, Bradford W., Verdin, Eric

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Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry von Collins, Ben C., Hunter, Christie L., Liu, Yansheng, Schilling, Birgit, Rosenberger, George, Bader, Samuel L., Chan, Daniel W., Gibson, Bradford W., Gingras, Anne-Claude, Held, Jason M., Hirayama-Kurogi, Mio, Hou, Guixue, Krisp, Christoph, Larsen, Brett, Lin, Liang, Liu, Siqi, Molloy, Mark P., Moritz, Robert L., Ohtsuki, Sumio, Schlapbach, Ralph, Selevsek, Nathalie, Thomas, Stefani N., Tzeng, Shin-Cheng, Zhang, Hui, Aebersold, Ruedi

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Critical role of acetylation in tau-mediated neurodegeneration and cognitive deficits von Min, Sang-Won, Chen, Xu, Tracy, Tara E, Li, Yaqiao, Zhou, Yungui, Wang, Chao, Shirakawa, Kotaro, Minami, S Sakura, Defensor, Erwin, Mok, Sue Ann, Sohn, Peter Dongmin, Schilling, Birgit, Cong, Xin, Ellerby, Lisa, Gibson, Bradford W, Johnson, Jeffrey, Krogan, Nevan, Shamloo, Mehrdad, Gestwicki, Jason, Masliah, Eliezer, Verdin, Eric, Gan, Li

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Dietary Sugars Alter Hepatic Fatty Acid Oxidation via Transcriptional and Post-translational Modifications of Mitochondrial Proteins von Softic, Samir, Meyer, Jesse G, Wang, Guo-Xiao, Gupta, Manoj K, Batista, Thiago M, Lauritzen, Hans P M M, Fujisaka, Shiho, Serra, Dolors, Herrero, Laura, Willoughby, Jennifer, Fitzgerald, Kevin, Ilkayeva, Olga, Newgard, Christopher B, Gibson, Bradford W, Schilling, Birgit, Cohen, David E, Kahn, C Ronald

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Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways von Rardin, Matthew J., Newman, John C., Held, Jason M., Cusack, Michael P., Sorensen, Dylan J., Li, Biao, Schilling, Birgit, Mooney, Sean D., Kahn, C. Ronald, Verdin, Eric, Gibson, Bradford W.

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Generation of High-Quality SWATH® Acquisition Data for Label-free Quantitative Proteomics Studies Using TripleTOF® Mass Spectrometers von Schilling, Birgit, Gibson, Bradford W., Hunter, Christie L.

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Adipose-Specific Deletion of TFAM Increases Mitochondrial Oxidation and Protects Mice against Obesity and Insulin Resistance von Vernochet, Cecile, Mourier, Arnaud, Bezy, Olivier, Macotela, Yazmin, Boucher, Jeremie, Rardin, Matthew J., An, Ding, Lee, Kevin Y., Ilkayeva, Olga R., Zingaretti, Cristina M., Emanuelli, Brice, Smyth, Graham, Cinti, Saverio, Newgard, Christopher B., Gibson, Bradford W., Larsson, Nils-Göran, Kahn, C. Ronald

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Regulatory Control or Oxidative Damage? Proteomic Approaches to Interrogate the Role of Cysteine Oxidation Status in Biological Processes von Held, Jason M., Gibson, Bradford W.

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Protein acetylation dynamics in response to carbon overflow in Escherichia coli von Schilling, Birgit, Christensen, David, Davis, Robert, Sahu, Alexandria K., Hu, Linda I., Walker‐Peddakotla, Arti, Sorensen, Dylan J., Zemaitaitis, Bozena, Gibson, Bradford W., Wolfe, Alan J.

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SIRT3 and SIRT5 regulate the enzyme activity and cardiolipin binding of very long-chain acyl-CoA dehydrogenase von Zhang, Yuxun, Bharathi, Sivakama S, Rardin, Matthew J, Uppala, Radha, Verdin, Eric, Gibson, Bradford W, Goetzman, Eric S

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Sirt3 Regulates Metabolic Flexibility of Skeletal Muscle Through Reversible Enzymatic Deacetylation von ENXUAN JING, O'NEILL, Brian T, GIBSON, Bradford W, KAHN, C. Ronald, RARDIN, Matthew J, KLEINRIDDERS, André, ILKEYEVA, Olga R, USSAR, Siegfried, BAIN, James R, LEE, Kevin Y, VERDIN, Eric M, NEWGARD, Christopher B

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SILAC Analysis Reveals Increased Secretion of Hemostasis-Related Factors by Senescent Cells von Wiley, Christopher D., Liu, Su, Limbad, Chandani, Zawadzka, Anna M., Beck, Jennifer, Demaria, Marco, Artwood, Robert, Alimirah, Fatouma, Lopez-Dominguez, Jose-Alberto, Kuehnemann, Chisaka, Danielson, Steven R., Basisty, Natan, Kasler, Herbert G., Oron, Tal Ronnen, Desprez, Pierre-Yves, Mooney, Sean D., Gibson, Bradford W., Schilling, Birgit, Campisi, Judith, Kapahi, Pankaj

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Sweetening the Pot: Adding Glycosylation to the Biomarker Discovery Equation von Drake, Penelope M, Cho, Wonryeon, Li, Bensheng, Prakobphol, Akraporn, Johansen, Eric, Anderson, N. Leigh, Regnier, Fred E, Gibson, Bradford W, Fisher, Susan J

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Temporal dynamics of liver mitochondrial protein acetylation and succinylation and metabolites due to high fat diet and/or excess glucose or fructose von Meyer, Jesse G, Softic, Samir, Basisty, Nathan, Rardin, Matthew J, Verdin, Eric, Gibson, Bradford W, Ilkayeva, Olga, Newgard, Christopher B, Kahn, C Ronald, Schilling, Birgit

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Simultaneous Quantification of the Acetylome and Succinylome by ‘One‐Pot’ Affinity Enrichment von Basisty, Nathan, Meyer, Jesse G, Wei, Lei, Gibson, Bradford W, Schilling, Birgit

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Vitamin D Promotes Protein Homeostasis and Longevity via the Stress Response Pathway Genes skn-1, ire-1, and xbp-1 von Mark, Karla A., Dumas, Kathleen J., Bhaumik, Dipa, Schilling, Birgit, Davis, Sonnet, Oron, Tal Ronnen, Sorensen, Dylan J., Lucanic, Mark, Brem, Rachel B., Melov, Simon, Ramanathan, Arvind, Gibson, Bradford W., Lithgow, Gordon J.

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Life Span Extension via eIF4G Inhibition Is Mediated by Posttranscriptional Remodeling of Stress Response Gene Expression in C. elegans von Rogers, Aric N., Chen, Di, McColl, Gawain, Czerwieniec, Gregg, Felkey, Krysta, Gibson, Bradford W., Hubbard, Alan, Melov, Simon, Lithgow, Gordon J., Kapahi, Pankaj

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An essential role for TASL in mouse autoimmune pathogenesis and Toll-like receptor signaling von Lau, Laura, Cariaga, Taryn A., Chang, Abraham B., Lane, Joan H., Purtha, Whitney E., Rapaport, Aaron S., Hu, Ruozhen, Konno, Hiroyasu, Bulloch, Daryl N., Rardin, Matthew J., Gibson, Bradford W., Devoss, Jason, Ouyang, Wenjun, Manzanillo, Paolo S.

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