Histone methyltransferase MMSET/NSD2 alters EZH2 binding and reprograms the myeloma epigenome through global and focal changes in H3K36 and H3K27 methylation von Popovic, Relja, Martinez-Garcia, Eva, Giannopoulou, Eugenia G, Zhang, Quanwei, Zhang, Qingyang, Ezponda, Teresa, Shah, Mrinal Y, Zheng, Yupeng, Will, Christine M, Small, Eliza C, Hua, Youjia, Bulic, Marinka, Jiang, Yanwen, Carrara, Matteo, Calogero, Raffaele A, Kath, William L, Kelleher, Neil L, Wang, Ji-Ping, Elemento, Olivier, Licht, Jonathan D

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Synergistic Activation of Inflammatory Cytokine Genes by Interferon-γ-Induced Chromatin Remodeling and Toll-like Receptor Signaling von Qiao, Yu, Giannopoulou, Eugenia G., Chan, Chun Hin, Park, Sung-ho, Gong, Shiaoching, Chen, Janice, Hu, Xiaoyu, Elemento, Olivier, Ivashkiv, Lionel B.

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An integrated ChIP-seq analysis platform with customizable workflows von Giannopoulou, Eugenia G, Elemento, Olivier

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Modulation of TNF-induced macrophage polarization by synovial fibroblasts von Donlin, Laura T, Jayatilleke, Arundathi, Giannopoulou, Eugenia G, Kalliolias, George D, Ivashkiv, Lionel B

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A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters von Hatzi, Katerina, Jiang, Yanwen, Huang, Chuanxin, Garrett-Bakelman, Francine, Gearhart, Micah D., Giannopoulou, Eugenia G., Zumbo, Paul, Kirouac, Kevin, Bhaskara, Srividya, Polo, Jose M., Kormaksson, Matthias, MacKerell, Alexander D., Xue, Fengtian, Mason, Christopher E., Hiebert, Scott W., Prive, Gilbert G., Cerchietti, Leandro, Bardwell, Vivian J., Elemento, Olivier, Melnick, Ari

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Hypoxia-Sensitive COMMD1 Integrates Signaling and Cellular Metabolism in Human Macrophages and Suppresses Osteoclastogenesis von Murata, Koichi, Fang, Celestia, Terao, Chikashi, Giannopoulou, Eugenia G., Lee, Ye Ji, Lee, Min Joon, Mun, Se-Hwan, Bae, Seyeon, Qiao, Yu, Yuan, Ruoxi, Furu, Moritoshi, Ito, Hiromu, Ohmura, Koichiro, Matsuda, Shuichi, Mimori, Tsuneyo, Matsuda, Fumihiko, Park-Min, Kyung-Hyun, Ivashkiv, Lionel B.

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Inferring chromatin-bound protein complexes from genome-wide binding assays von Giannopoulou, Eugenia G, Elemento, Olivier

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CDK/CK1 inhibitors roscovitine and CR8 downregulate amplified MYCN in neuroblastoma cells von Delehouzé, C, Godl, K, Loaëc, N, Bruyère, C, Desban, N, Oumata, N, Galons, H, Roumeliotis, T I, Giannopoulou, E G, Grenet, J, Twitchell, D, Lahti, J, Mouchet, N, Galibert, M-D, Garbis, S D, Meijer, L

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Tumor Necrosis Factor dynamically regulates the mRNA stabilome in rheumatoid arthritis fibroblast-like synoviocytes von Loupasakis, Konstantinos, Kuo, David, Sokhi, Upneet K, Sohn, Christopher, Syracuse, Bethany, Giannopoulou, Eugenia G, Park, Sung Ho, Kang, Hyelim, Rätsch, Gunnar, Ivashkiv, Lionel B, Kalliolias, George D

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Use of RNA sequencing to evaluate rheumatic disease patients von Giannopoulou, Eugenia G, Elemento, Olivier, Ivashkiv, Lionel B

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Epigenetic profiles signify cell fate plasticity in unipotent spermatogonial stem and progenitor cells von Liu, Ying, Giannopoulou, Eugenia G., Wen, Duancheng, Falciatori, Ilaria, Elemento, Olivier, Allis, C. David, Rafii, Shahin, Seandel, Marco

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Epigenomic Alterations in Localized and Advanced Prostate Cancer von Lin, Pei-Chun, Giannopoulou, Eugenia G, Park, Kyung, Mosquera, Juan Miguel, Sboner, Andrea, Tewari, Ashutosh K, Garraway, Levi A, Beltran, Himisha, Rubin, Mark A, Elemento, Olivier

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The chromatin Remodeler CHD8 is required for activation of progesterone receptor-dependent enhancers von Ceballos-Chávez, María, Subtil-Rodríguez, Alicia, Giannopoulou, Eugenia G, Soronellas, Daniel, Vázquez-Chávez, Elena, Vicent, Guillermo P, Elemento, Olivier, Beato, Miguel, Reyes, José C

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Interferon-γ regulates cellular metabolism and mRNA translation to potentiate macrophage activation von Su, Xiaodi, Yu, Yingpu, Zhong, Yi, Giannopoulou, Eugenia G, Hu, Xiaoyu, Liu, Hui, Cross, Justin R, Rätsch, Gunnar, Rice, Charles M, Ivashkiv, Lionel B

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Vitamin C selectively kills KRAS and BRAF mutant colorectal cancer cells by targeting GAPDH von Yun, Jihye, Mullarky, Edouard, Lu, Changyuan, Bosch, Kaitlyn N., Kavalier, Adam, Rivera, Keith, Roper, Jatin, Chio, Iok In Christine, Giannopoulou, Eugenia G., Rago, Carlo, Muley, Ashlesha, Asara, John M., Paik, Jihye, Elemento, Olivier, Chen, Zhengming, Pappin, Darryl J., Dow, Lukas E., Papadopoulos, Nickolas, Gross, Steven S., Cantley, Lewis C.

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The crosstalk between MYC and mTORC1 during osteoclastogenesis von Bae, Seyeon, Oh, Brian, Tsai, Jefferson, Park, Peter Sang Uk, Greenblatt, Matthew Blake, Giannopoulou, Eugenia G, Park-Min, Kyung-Hyun

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MYC-dependent oxidative metabolism regulates osteoclastogenesis via nuclear receptor ERRα von Bae, Seyeon, Lee, Min Joon, Mun, Se Hwan, Giannopoulou, Eugenia G, Yong-Gonzalez, Vladimir, Cross, Justin R, Murata, Koichi, Giguère, Vincent, van der Meulen, Marjolein, Park-Min, Kyung-Hyun

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NFIB is a governor of epithelial–melanocyte stem cell behaviour in a shared niche von Chang, Chiung-Ying, Pasolli, H. Amalia, Giannopoulou, Eugenia G., Guasch, Géraldine, Gronostajski, Richard M., Elemento, Olivier, Fuchs, Elaine

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Search for Potential Markers for Prostate Cancer Diagnosis, Prognosis and Treatment in Clinical Tissue Specimens Using Amine-Specific Isobaric Tagging (iTRAQ) with Two-Dimensional... von Garbis, Spiros D, Tyritzis, Stavros I, Roumeliotis, Theodoros, Zerefos, Panagiotis, Giannopoulou, Eugenia G, Vlahou, Antonia, Kossida, Sophia, Diaz, Jose, Vourekas, Stavros, Tamvakopoulos, Constantin, Pavlakis, Kitty, Sanoudou, Despina, Constantinides, Constantinos A

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Pharmacoproteomic Study of the Natural Product Ebenfuran III in DU-145 Prostate Cancer Cells: The Quantitative and Temporal Interrogation of Chemically Induced Cell Death at the Pr... von Roumeliotis, Theodoros I, Halabalaki, Maria, Alexi, Xanthippi, Ankrett, Dyan, Giannopoulou, Eugenia G, Skaltsounis, Alexios-Leandros, Sayan, Berna S, Alexis, Michael N, Townsend, Paul A, Garbis, Spiros D

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