HiGlass: web-based visual exploration and analysis of genome interaction maps von Kerpedjiev, Peter, Abdennur, Nezar, Lekschas, Fritz, McCallum, Chuck, Dinkla, Kasper, Strobelt, Hendrik, Luber, Jacob M, Ouellette, Scott B, Azhir, Alaleh, Kumar, Nikhil, Hwang, Jeewon, Lee, Soohyun, Alver, Burak H, Pfister, Hanspeter, Mirny, Leonid A, Park, Peter J, Gehlenborg, Nils

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Viv: multiscale visualization of high-resolution multiplexed bioimaging data on the web von Manz, Trevor, Gold, Ilan, Patterson, Nathan Heath, McCallum, Chuck, Keller, Mark S., Herr, Bruce W., Börner, Katy, Spraggins, Jeffrey M., Gehlenborg, Nils

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Diverse Mechanisms of Somatic Structural Variations in Human Cancer Genomes von Yang, Lixing, Luquette, Lovelace J., Gehlenborg, Nils, Xi, Ruibin, Haseley, Psalm S., Hsieh, Chih-Heng, Zhang, Chengsheng, Ren, Xiaojia, Protopopov, Alexei, Chin, Lynda, Kucherlapati, Raju, Lee, Charles, Park, Peter J.

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The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data von Reiff, Sarah B., Schroeder, Andrew J., Kırlı, Koray, Cosolo, Andrea, Bakker, Clara, Mercado, Luisa, Lee, Soohyun, Veit, Alexander D., Balashov, Alexander K., Vitzthum, Carl, Ronchetti, William, Pitman, Kent M., Johnson, Jeremy, Ehmsen, Shannon R., Kerpedjiev, Peter, Abdennur, Nezar, Imakaev, Maxim, Öztürk, Serkan Utku, Çamoğlu, Uğur, Mirny, Leonid A., Gehlenborg, Nils, Alver, Burak H., Park, Peter J.

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Guidelines for reporting single-cell RNA-seq experiments von Füllgrabe, Anja, George, Nancy, Green, Matthew, Nejad, Parisa, Aronow, Bruce, Fexova, Silvie Korena, Fischer, Clay, Freeberg, Mallory Ann, Huerta, Laura, Morrison, Norman, Scheuermann, Richard H., Taylor, Deanne, Vasilevsky, Nicole, Clarke, Laura, Gehlenborg, Nils, Kent, Jim, Marioni, John, Teichmann, Sarah, Brazma, Alvis, Papatheodorou, Irene

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Interactive visual exploration and refinement of cluster assignments von Kern, Michael, Lex, Alexander, Gehlenborg, Nils, Johnson, Chris R

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Alerts and Collections for Automating Patients’ Sensemaking and Organizing of Their Electronic Health Record Data for Reflection, Planning, and Clinical Visits: Qualitative Researc... von Nakikj, Drashko, Kreda, David, Gehlenborg, Nils

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MAMS: matrix and analysis metadata standards to facilitate harmonization and reproducibility of single-cell data von Sarfraz, Irzam, Wang, Yichen, Shastry, Amulya, Teh, Wei Kheng, Sokolov, Artem, Herb, Brian R, Creasy, Heather H, Virshup, Isaac, Dries, Ruben, Degatano, Kylee, Mahurkar, Anup, Schnell, Daniel J, Madrigal, Pedro, Hilton, Jason, Gehlenborg, Nils, Tickle, Timothy, Campbell, Joshua D

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New Ways for Patients to Make Sense of Their Electronic Health Record Data Using the Discovery Web Application: Think-Aloud Evaluation Study von Nakikj, Drashko, Kreda, David, Gehlenborg, Nils

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UpSetR: an R package for the visualization of intersecting sets and their properties von Conway, Jake R, Lex, Alexander, Gehlenborg, Nils

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An Integrated, Directed Mass Spectrometric Approach for In-depth Characterization of Complex Peptide Mixtures von Schmidt, Alexander, Gehlenborg, Nils, Bodenmiller, Bernd, Mueller, Lukas N., Campbell, Dave, Mueller, Markus, Aebersold, Ruedi, Domon, Bruno

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A systems approach to prion disease von Hood, Leroy E, Price, Nathan D, Pitstick, Rose, Cho, Ji-Hoon, Lee, Inyoul Y, Yoo, Hyuntae, Hohmann, John G, Hwang, Daehee, Spicer, Doug, Petritis, Brianne, DeArmond, Stephen J, Young, Rebecca, Gehlenborg, Nils, Baxter, David, Carlson, George A

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Points of view: Sets and intersections von Lex, Alexander, Gehlenborg, Nils

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Author Correction: The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data von Reiff, Sarah B., Schroeder, Andrew J., Kırlı, Koray, Cosolo, Andrea, Bakker, Clara, Mercado, Luisa, Lee, Soohyun, Veit, Alexander D., Balashov, Alexander K., Vitzthum, Carl, Ronchetti, William, Pitman, Kent M., Johnson, Jeremy, Ehmsen, Shannon R., Kerpedjiev, Peter, Abdennur, Nezar, Imakaev, Maxim, Öztürk, Serkan Utku, Çamoğlu, Uğur, Mirny, Leonid A., Gehlenborg, Nils, Alver, Burak H., Park, Peter J.

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Effective Communication of Personalized Risks and Patient Preferences During Surgical Informed Consent Using Data Visualization: Qualitative Semistructured Interview Study With Pat... von Gisladottir, Undina, Nakikj, Drashko, Jhunjhunwala, Rashi, Panton, Jasmine, Brat, Gabriel, Gehlenborg, Nils

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UpSet: Visualization of Intersecting Sets von Lex, Alexander, Gehlenborg, Nils, Strobelt, Hendrik, Vuillemot, Romain, Pfister, Hanspeter

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Bar charts and box plots von Streit, Marc, Gehlenborg, Nils

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Points of View: Heat maps von Gehlenborg, Nils, Wong, Bang

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Heat maps von Gehlenborg, Nils, Wong, Bang

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SATORI: a system for ontology-guided visual exploration of biomedical data repositories von Lekschas, Fritz, Gehlenborg, Nils

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