Effect of the counterion size on microphase separation in charged-neutral diblock copolymers von Gavrilov, Alexey A.

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Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells von Ulianov, Sergey V, Velichko, Artem K, Magnitov, Mikhail D, Luzhin, Artem V, Golov, Arkadiy K, Ovsyannikova, Natalia, Kireev, Igor I, Gavrikov, Alexey S, Mishin, Alexander S, Garaev, Azat K, Tyakht, Alexander V, Gavrilov, Alexey A, Kantidze, Omar L, Razin, Sergey V

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Phase diagrams of block copolymer melts by dissipative particle dynamics simulations von Gavrilov, Alexey A, Kudryavtsev, Yaroslav V, Chertovich, Alexander V

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Nuclear lamina integrity is required for proper spatial organization of chromatin in Drosophila von Ulianov, Sergey V., Doronin, Semen A., Khrameeva, Ekaterina E., Kos, Pavel I., Luzhin, Artem V., Starikov, Sergei S., Galitsyna, Aleksandra A., Nenasheva, Valentina V., Ilyin, Artem A., Flyamer, Ilya M., Mikhaleva, Elena A., Logacheva, Mariya D., Gelfand, Mikhail S., Chertovich, Alexander V., Gavrilov, Alexey A., Razin, Sergey V., Shevelyov, Yuri Y.

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Order and stochasticity in the folding of individual Drosophila genomes von Ulianov, Sergey V., Zakharova, Vlada V., Galitsyna, Aleksandra A., Kos, Pavel I., Polovnikov, Kirill E., Flyamer, Ilya M., Mikhaleva, Elena A., Khrameeva, Ekaterina E., Germini, Diego, Logacheva, Mariya D., Gavrilov, Alexey A., Gorsky, Alexander S., Nechaev, Sergey K., Gelfand, Mikhail S., Vassetzky, Yegor S., Chertovich, Alexander V., Shevelyov, Yuri Y., Razin, Sergey V.

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A genome-wide nucleosome-resolution map of promoter-centered interactions in human cells corroborates the enhancer-promoter looping model von Golov, Arkadiy K, Gavrilov, Alexey A, Kaplan, Noam, Razin, Sergey V

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Convergent pairs of highly transcribed genes restrict chromatin looping in Dictyostelium discoideum von Zhegalova, Irina V, Ulianov, Sergey V, Galitsyna, Aleksandra A, Pletenev, Ilya A, Tsoy, Olga V, Luzhin, Artem V, Vasiluev, Petr A, Bulavko, Egor S, Ivankov, Dmitry N, Gavrilov, Alexey A, Khrameeva, Ekaterina E, Gelfand, Mikhail S, Razin, Sergey V

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Effect of counterion excluded volume on the conformational behavior of polyelectrolyte chains von Gordievskaya, Yulia D, Gavrilov, Alexey A, Kramarenko, Elena Yu

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Long non-coding RNAs direct the SWI/SNF complex to cell type-specific enhancers von Oo, James A., Warwick, Timothy, Pálfi, Katalin, Lam, Frederike, McNicoll, Francois, Prieto-Garcia, Cristian, Günther, Stefan, Cao, Can, Zhou, Yinuo, Gavrilov, Alexey A., Razin, Sergey V., Cabrera-Orefice, Alfredo, Wittig, Ilka, Pullamsetti, Soni Savai, Kurian, Leo, Gilsbach, Ralf, Schulz, Marcel H., Dikic, Ivan, Müller-McNicoll, Michaela, Brandes, Ralf P., Leisegang, Matthias S.

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Disclosure of a structural milieu for the proximity ligation reveals the elusive nature of an active chromatin hub von Gavrilov, Alexey A, Gushchanskaya, Ekaterina S, Strelkova, Olga, Zhironkina, Oksana, Kireev, Igor I, Iarovaia, Olga V, Razin, Sergey V

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Dissipative particle dynamics for systems with polar species: Interactions in dielectric media von Gavrilov, Alexey A.

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LASCA: loop and significant contact annotation pipeline von Luzhin, Artem V., Golov, Arkadiy K., Gavrilov, Alexey A., Velichko, Artem K., Ulianov, Sergey V., Razin, Sergey V., Kantidze, Omar L.

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Communication of genome regulatory elements in a folded chromosome von Razin, Sergey V., Gavrilov, Alexey A., Ioudinkova, Elena S., Iarovaia, Olga V.

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CRISPR/Cas9-generated mouse model of Duchenne muscular dystrophy recapitulating a newly identified large 430 kb deletion in the human DMD gene von Egorova, Tatiana V, Zotova, Evgenia D, Reshetov, Denis A, Polikarpova, Anna V, Vassilieva, Svetlana G, Vlodavets, Dmitry V, Gavrilov, Alexey A, Ulianov, Sergey V, Buchman, Vladimir L, Deykin, Alexei V

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Effect of ion distribution on stress relaxation in polyelectrolyte complex gels von Gavrilov, Alexey A., Kramarenko, Elena Yu

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Sensitivity of cohesin-chromatin association to high-salt treatment corroborates non-topological mode of loop extrusion von Golov, Arkadiy K, Golova, Anastasia V, Gavrilov, Alexey A, Razin, Sergey V

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Erratum: “Dissipative particle dynamics for systems with polar species: Interactions in dielectric media” [J. Chem. Phys. 152, 164101 (2020)] von Gavrilov, Alexey A.

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The Role of Crowding Forces in Juxtaposing β-Globin Gene Domain Remote Regulatory Elements in Mouse Erythroid Cells von Golov, Arkadiy K, Gavrilov, Alexey A, Razin, Sergey V

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Actual ligation frequencies in the chromosome conformation capture procedure von Gavrilov, Alexey A, Golov, Arkadiy K, Razin, Sergey V

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Non-coding RNAs in chromatin folding and nuclear organization von Razin, Sergey V., Gavrilov, Alexey A.

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