Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple von Chagné, David, Crowhurst, Ross N, Troggio, Michela, Davey, Mark W, Gilmore, Barbara, Lawley, Cindy, Vanderzande, Stijn, Hellens, Roger P, Kumar, Satish, Cestaro, Alessandro, Velasco, Riccardo, Main, Dorrie, Rees, Jasper D, Iezzoni, Amy, Mockler, Todd, Wilhelm, Larry, Van de Weg, Eric, Gardiner, Susan E, Bassil, Nahla, Peace, Cameron, Bendahmane, Mohammed

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The draft genome sequence of European pear (Pyrus communis L. 'Bartlett') von Chagné, David, Crowhurst, Ross N, Pindo, Massimo, Thrimawithana, Amali, Deng, Cecilia, Ireland, Hilary, Fiers, Mark, Dzierzon, Helge, Cestaro, Alessandro, Fontana, Paolo, Bianco, Luca, Lu, Ashley, Storey, Roy, Knäbel, Mareike, Saeed, Munazza, Montanari, Sara, Kim, Yoon Kyeong, Nicolini, Daniela, Larger, Simone, Stefani, Erika, Allan, Andrew C, Bowen, Judith, Harvey, Isaac, Johnston, Jason, Malnoy, Mickael, Troggio, Michela, Perchepied, Laure, Sawyer, Greg, Wiedow, Claudia, Won, Kyungho, Viola, Roberto, Hellens, Roger P, Brewer, Lester, Bus, Vincent G M, Schaffer, Robert J, Gardiner, Susan E, Velasco, Riccardo

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Comparative population genomics identified genomic regions and candidate genes associated with fruit domestication traits in peach von Cao, Ke, Li, Yong, Deng, Cecilia H., Gardiner, Susan E., Zhu, Gengrui, Fang, Weichao, Chen, Changwen, Wang, Xinwei, Wang, Lirong

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Identification of Pyrus single nucleotide polymorphisms (SNPs) and evaluation for genetic mapping in European pear and interspecific Pyrus hybrids von Montanari, Sara, Saeed, Munazza, Knäbel, Mareike, Kim, YoonKyeong, Troggio, Michela, Malnoy, Mickael, Velasco, Riccardo, Fontana, Paolo, Won, KyungHo, Durel, Charles-Eric, Perchepied, Laure, Schaffer, Robert, Wiedow, Claudia, Bus, Vincent, Brewer, Lester, Gardiner, Susan E, Crowhurst, Ross N, Chagné, David

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Pseudo-chromosome–length genome assembly of a double haploid “Bartlett” pear (Pyrus communis L.) von Linsmith, Gareth, Rombauts, Stephane, Montanari, Sara, Deng, Cecilia H, Celton, Jean-Marc, Guérif, Philippe, Liu, Chang, Lohaus, Rolf, Zurn, Jason D, Cestaro, Alessandro, Bassil, Nahla V, Bakker, Linda V, Schijlen, Elio, Gardiner, Susan E, Lespinasse, Yves, Durel, Charles-Eric, Velasco, Riccardo, Neale, David B, Chagné, David, Van de Peer, Yves, Troggio, Michela, Bianco, Luca

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Breeding better cultivars, faster: applications of new technologies for the rapid deployment of superior horticultural tree crops von van Nocker, Steve, Gardiner, Susan E

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Genetic control of biennial bearing in apple von Guitton, Baptiste, Kelner, Jean-Jacques, Velasco, Riccardo, Gardiner, Susan E., Chagné, David, Costes, Evelyne

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An Ancient Duplication of Apple MYB Transcription Factors Is Responsible for Novel Red Fruit-Flesh Phenotypes von Chagné, David, Lin-Wang, Kui, Espley, Richard V., Volz, Richard K., How, Natalie M., Rouse, Simon, Brendolise, Cyril, Carlisle, Charmaine M., Kumar, Satish, De Silva, Nihal, Micheletti, Diego, McGhie, Tony, Crowhurst, Ross N., Storey, Roy D., Velasco, Riccardo, Hellens, Roger P., Gardiner, Susan E., Allan, Andrew C.

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Multiple Repeats of a Promoter Segment Causes Transcription Factor Autoregulation in Red Apples von Espley, Richard V, Brendolise, Cyril, Chagné, David, Kutty-Amma, Sumathi, Green, Sol, Volz, Richard, Putterill, Jo, Schouten, Henk J, Gardiner, Susan E, Hellens, Roger P, Allan, Andrew C

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A microRNA allele that emerged prior to apple domestication may underlie fruit size evolution von Yao, Jia‐Long, Xu, Juan, Cornille, Amandine, Tomes, Sumathi, Karunairetnam, Sakuntala, Luo, Zhiwei, Bassett, Heather, Whitworth, Claire, Rees‐George, Jonathan, Ranatunga, Chandra, Snirc, Alodie, Crowhurst, Ross, Silva, Nihal, Warren, Ben, Deng, Cecilia, Kumar, Satish, Chagné, David, Bus, Vincent G. M., Volz, Richard K., Rikkerink, Erik H. A., Gardiner, Susan E., Giraud, Tatiana, MacDiarmid, Robin, Gleave, Andrew P.

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QTL and candidate gene mapping for polyphenolic composition in apple fruit von Chagné, David, Krieger, Célia, Rassam, Maysoon, Sullivan, Mike, Fraser, Jenny, André, Christelle, Pindo, Massimo, Troggio, Michela, Gardiner, Susan E, Henry, Rebecca A, Allan, Andrew C, McGhie, Tony K, Laing, William A

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A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants von Pilkington, Sarah M, Crowhurst, Ross, Hilario, Elena, Nardozza, Simona, Fraser, Lena, Peng, Yongyan, Gunaseelan, Kularajathevan, Simpson, Robert, Tahir, Jibran, Deroles, Simon C, Templeton, Kerry, Luo, Zhiwei, Davy, Marcus, Cheng, Canhong, McNeilage, Mark, Scaglione, Davide, Liu, Yifei, Zhang, Qiong, Datson, Paul, De Silva, Nihal, Gardiner, Susan E, Bassett, Heather, Chagné, David, McCallum, John, Dzierzon, Helge, Deng, Cecilia, Wang, Yen-Yi, Barron, Lorna, Manako, Kelvina, Bowen, Judith, Foster, Toshi M, Erridge, Zoe A, Tiffin, Heather, Waite, Chethi N, Davies, Kevin M, Grierson, Ella P, Laing, William A, Kirk, Rebecca, Chen, Xiuyin, Wood, Marion, Montefiori, Mirco, Brummell, David A, Schwinn, Kathy E, Catanach, Andrew, Fullerton, Christina, Li, Dawei, Meiyalaghan, Sathiyamoorthy, Nieuwenhuizen, Niels, Read, Nicola, Prakash, Roneel, Hunter, Don, Zhang, Huaibi, McKenzie, Marian, Knäbel, Mareike, Harris, Alastair, Allan, Andrew C, Gleave, Andrew, Chen, Angela, Janssen, Bart J, Plunkett, Blue, Ampomah-Dwamena, Charles, Voogd, Charlotte, Leif, Davin, Lafferty, Declan, Souleyre, Edwige J F, Varkonyi-Gasic, Erika, Gambi, Francesco, Hanley, Jenny, Yao, Jia-Long, Cheung, Joey, David, Karine M, Warren, Ben, Marsh, Ken, Snowden, Kimberley C, Lin-Wang, Kui, Brian, Lara, Martinez-Sanchez, Marcela, Wang, Mindy, Ileperuma, Nadeesha, Macnee, Nikolai, Campin, Robert, McAtee, Peter, Drummond, Revel S M, Espley, Richard V, Ireland, Hilary S, Wu, Rongmei, Atkinson, Ross G, Karunairetnam, Sakuntala, Bulley, Sean, Chunkath, Shayhan, Hanley, Zac, Storey, Roy, Thrimawithana, Amali H, Thomson, Susan, David, Charles, Testolin, Raffaele, Huang, Hongwen, Hellens, Roger P, Schaffer, Robert J

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The genome of the domesticated apple ( Malus × domestica Borkh.) von Velasco, Riccardo, Zharkikh, Andrey, Affourtit, Jason, Dhingra, Amit, Cestaro, Alessandro, Kalyanaraman, Ananth, Fontana, Paolo, Bhatnagar, Satish K, Troggio, Michela, Pruss, Dmitry, Salvi, Silvio, Pindo, Massimo, Baldi, Paolo, Castelletti, Sara, Cavaiuolo, Marina, Coppola, Giuseppina, Costa, Fabrizio, Cova, Valentina, Dal Ri, Antonio, Goremykin, Vadim, Komjanc, Matteo, Longhi, Sara, Magnago, Pierluigi, Malacarne, Giulia, Malnoy, Mickael, Micheletti, Diego, Moretto, Marco, Perazzolli, Michele, Si-Ammour, Azeddine, Vezzulli, Silvia, Zini, Elena, Eldredge, Glenn, Fitzgerald, Lisa M, Gutin, Natalia, Lanchbury, Jerry, Macalma, Teresita, Mitchell, Jeff T, Reid, Julia, Wardell, Bryan, Kodira, Chinnappa, Chen, Zhoutao, Desany, Brian, Niazi, Faheem, Palmer, Melinda, Koepke, Tyson, Jiwan, Derick, Schaeffer, Scott, Krishnan, Vandhana, Wu, Changjun, Chu, Vu T, King, Stephen T, Vick, Jessica, Tao, Quanzhou, Mraz, Amy, Stormo, Aimee, Stormo, Keith, Bogden, Robert, Ederle, Davide, Stella, Alessandra, Vecchietti, Alberto, Kater, Martin M, Masiero, Simona, Lasserre, Pauline, Lespinasse, Yves, Allan, Andrew C, Bus, Vincent, Chagné, David, Crowhurst, Ross N, Gleave, Andrew P, Lavezzo, Enrico, Fawcett, Jeffrey A, Proost, Sebastian, Rouzé, Pierre, Sterck, Lieven, Toppo, Stefano, Lazzari, Barbara, Hellens, Roger P, Durel, Charles-Eric, Gutin, Alexander, Bumgarner, Roger E, Gardiner, Susan E, Skolnick, Mark, Egholm, Michael, Van de Peer, Yves, Salamini, Francesco, Viola, Roberto

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A model for determining ex situ conservation priorities in big genera is provided by analysis of the subgenera of Rhododendron (Ericaceae) von MacKay, Marion, Gardiner, Susan E.

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Mapping a candidate gene (MdMYB10) for red flesh and foliage colour in apple von Chagné, David, Carlisle, Charmaine M, Blond, Céline, Volz, Richard K, Whitworth, Claire J, Oraguzie, Nnadozie C, Crowhurst, Ross N, Allan, Andrew C, Espley, Richard V, Hellens, Roger P, Gardiner, Susan E

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Apple whole genome sequences: recent advances and new prospects von Peace, Cameron P., Bianco, Luca, Troggio, Michela, van de Weg, Eric, Howard, Nicholas P., Cornille, Amandine, Durel, Charles-Eric, Myles, Sean, Migicovsky, Zoë, Schaffer, Robert J., Costes, Evelyne, Fazio, Gennaro, Yamane, Hisayo, van Nocker, Steve, Gottschalk, Chris, Costa, Fabrizio, Chagné, David, Zhang, Xinzhong, Patocchi, Andrea, Gardiner, Susan E., Hardner, Craig, Kumar, Satish, Laurens, Francois, Bucher, Etienne, Main, Dorrie, Jung, Sook, Vanderzande, Stijn

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Ploidy variation in Rhododendron subsection Maddenia and its implications for conservation von Hu, Ling, Tate, Jennifer A, Gardiner, Susan E, MacKay, Marion

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Mapping of fire blight resistance in Malus ×robusta 5 flowers following artificial inoculation von Peil, Andreas, Hübert, Christine, Wensing, Annette, Horner, Mary, Emeriewen, Ofere Francis, Richter, Klaus, Wöhner, Thomas, Chagné, David, Orellana-Torrejon, Carolina, Saeed, Munazza, Troggio, Michela, Stefani, Erika, Gardiner, Susan E, Hanke, Magda-Viola, Flachowsky, Henryk, Bus, Vincent G M

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First Chromosome-Scale Assembly and Deep Floral-Bud Transcriptome of a Male Kiwifruit von Tahir, Jibran, Crowhurst, Ross, Deroles, Simon, Hilario, Elena, Deng, Cecilia, Schaffer, Robert, Le Lievre, Liam, Brendolise, Cyril, Chagné, David, Gardiner, Susan E, Knaebel, Mareike, Catanach, Andrew, McCallum, John, Datson, Paul, Thomson, Susan, Brownfield, Lynette R, Nardozza, Simona, Pilkington, Sarah M

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Multiple Models for Rosaceae Genomics von Shulaev, Vladimir, Korban, Schuyler S, Sosinski, Bryon, Abbott, Albert G, Aldwinckle, Herb S, Folta, Kevin M, Iezzoni, Amy, Main, Dorrie, Arús, Pere, Dandekar, Abhaya M, Lewers, Kim, Brown, Susan K, Davis, Thomas M, Gardiner, Susan E, Potter, Daniel, Veilleux, Richard E

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