Ten Year Review of Queue Scheduling of the Hobby‐Eberly Telescope von Shetrone, Matthew, Cornell, Mark E., Fowler, James R., Gaffney, Niall, Laws, Benjamin, Mader, Jeff, Mason, Cloud, Odewahn, Stephen, Roman, Brian, Rostopchin, Sergey, Schneider, Donald P., Umbarger, James, Westfall, Amy

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Highly-automated, high-throughput replication of yeast-based logic circuit design assessments von Goldman, Robert P, Moseley, Robert, Roehner, Nicholas, Cummins, Breschine, Vrana, Justin D, Clowers, Katie J, Bryce, Daniel, Beal, Jacob, DeHaven, Matthew, Nowak, Joshua, Higa, Trissha, Biggers, Vanessa, Lee, Peter, Hunt, Jeremy P, Mosqueda, Lorraine, Haase, Steven B, Weston, Mark, Zheng, George, Deckard, Anastasia, Gopaulakrishnan, Shweta, Stubbs, Joseph F, Gaffney, Niall I, Vaughn, Matthew W, Maheshri, Narendra, Mikhalev, Ekaterina, Bartley, Bryan, Markeloff, Richard, Mitchell, Tom, Nguyen, Tramy, Sumorok, Daniel, Walczak, Nicholas, Myers, Chris, Zundel, Zach, Hatch, Benjamin, Scholz, James, Colonna-Romano, John

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Computing environments for reproducibility: Capturing the “Whole Tale” von Brinckman, Adam, Chard, Kyle, Gaffney, Niall, Hategan, Mihael, Jones, Matthew B., Kowalik, Kacper, Kulasekaran, Sivakumar, Ludäscher, Bertram, Mecum, Bryce D., Nabrzyski, Jarek, Stodden, Victoria, Taylor, Ian J., Turk, Matthew J., Turner, Kandace

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Prediction of whole-cell transcriptional response with machine learning von Eslami, Mohammed, Borujeni, Amin Espah, Eramian, Hamed, Weston, Mark, Zheng, George, Urrutia, Joshua, Corbet, Carolyn, Becker, Diveena, Maschhoff, Paul, Clowers, Katie, Cristofaro, Alexander, Hosseini, Hamid Doost, Gordon, D Benjamin, Dorfan, Yuval, Singer, Jedediah, Vaughn, Matthew, Gaffney, Niall, Fonner, John, Stubbs, Joe, Voigt, Christopher A, Yeung, Enoch

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Round Trip: An Automated Pipeline for Experimental Design, Execution, and Analysis von Bryce, Daniel, Goldman, Robert P, DeHaven, Matthew, Beal, Jacob, Bartley, Bryan, Nguyen, Tramy T, Walczak, Nicholas, Weston, Mark, Zheng, George, Nowak, Josh, Lee, Peter, Stubbs, Joe, Gaffney, Niall, Vaughn, Matthew W, Myers, Chris John, Moseley, Robert C, Haase, Steven, Deckard, Anastasia, Cummins, Bree, Leiby, Nick

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A toolkit for enhanced reproducibility of RNASeq analysis for synthetic biologists von Garcia, Benjamin J, Urrutia, Joshua, Zheng, George, Becker, Diveena, Corbet, Carolyn, Maschhoff, Paul, Cristofaro, Alexander, Gaffney, Niall, Vaughn, Matthew, Saxena, Uma, Chen, Yi-Pei, Gordon, D Benjamin, Eslami, Mohammed

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Computing environments for reproducibility: Capturing the “Whole Tale” von Brinckman, Adam, Chard, Kyle, Gaffney, Niall, Hategan, Mihael, Jones, Matthew B., Kowalik, Kacper, Kulasekaran, Sivakumar, Ludäscher, Bertram, Mecum, Bryce D., Nabrzyski, Jarek, Stodden, Victoria, Taylor, Ian J., Turk, Matthew J., Turner, Kandace

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Robustness and reproducibility of simple and complex synthetic logic circuit designs using a DBTL loop von Cummins, Breschine, Vrana, Justin, Moseley, Robert C, Eramian, Hamed, Deckard, Anastasia, Fontanarrosa, Pedro, Bryce, Daniel, Weston, Mark, Zheng, George, Nowak, Joshua, Motta, Francis C, Eslami, Mohammed, Johnson, Kara Layne, Goldman, Robert P, Myers, Chris J, Johnson, Tessa, Vaughn, Matthew W, Gaffney, Niall, Urrutia, Joshua, Gopaulakrishnan, Shweta, Biggers, Vanessa, Higa, Trissha R, Mosqueda, Lorraine A, Gameiro, Marcio, Gedeon, Tomáš, Mischaikow, Konstantin, Beal, Jacob, Bartley, Bryan, Mitchell, Tom, Nguyen, Tramy T, Roehner, Nicholas, Haase, Steven B

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Elements: Cognitasium - Enabling Data-Driven Discoveries in Natural Hazards Engineering von Kumar, Krishna, Rathje, Ellen, Gaffney, Niall, Choi, Yonjin

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The demise of the filesystem and multi level service architecture von O'Mullane, William, Gaffney, Niall, Economou, Frossie, Smith, Arfon M, Thomson, J. Ross, Jenness, Tim

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FanStore: Enabling Efficient and Scalable I/O for Distributed Deep Learning von Zhang, Zhao, Huang, Lei, Manor, Uri, Fang, Linjing, Merlo, Gabriele, Michoski, Craig, Cazes, John, Gaffney, Niall

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Toward Enabling Reproducibility for Data-Intensive Research using the Whole Tale Platform von Chard, Kyle, Gaffney, Niall, Hategan, Mihael, Kowalik, Kacper, Ludaescher, Bertram, McPhillips, Timothy, Nabrzyski, Jarek, Stodden, Victoria, Taylor, Ian, Thelen, Thomas, Turk, Matthew J, Willis, Craig

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A data-driven method for quantifying the impact of a genetic circuit on its host von Hasnain, Aqib, Sinha, Subhrajit, Dorfan, Yuval, Borujeni, Amin Espah, Park, Yongjin, Maschhoff, Paul, Saxena, Uma, Urrutia, Joshua, Gaffney, Niall, Becker, Diveena, Siba, Atsede, Maheshri, Narendra, Gordon, Ben, Voigt, Chris, Yeung, Enoch

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Capturing the "Whole Tale" of Computational Research: Reproducibility in Computing Environments von Ludaescher, Bertram, Chard, Kyle, Gaffney, Niall, Jones, Matthew B, Nabrzyski, Jaroslaw, Stodden, Victoria, Turk, Matthew

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Stellar kinematics in the nucleus of NGC 6240: A massive galaxy revealed von Lester, Dan F., Gaffney, Niall I.

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The demise of the filesystem and multi level service architecture von O'Mullane, William, Gaffney, Niall, Economou, Frossie, Smith, Arfon M, J Ross Thomson, Jenness, Tim

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Computing Environments for Reproducibility: Capturing the "Whole Tale" von Brinckman, Adam, Chard, Kyle, Gaffney, Niall, Hategan, Mihael, Jones, Matthew B, Kowalik, Kacper, Kulasekaran, Sivakumar, Ludäscher, Bertram, Mecum, Bryce D, Nabrzyski, Jarek, Stodden, Victoria, Taylor, Ian J, Turk, Matthew J, Turner, Kandace

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Petabytes to Science von Bauer, Amanda E, Bellm, Eric C, Bolton, Adam S, Chaudhuri, Surajit, Connolly, A. J, Cruz, Kelle L, Desai, Vandana, Drlica-Wagner, Alex, Economou, Frossie, Gaffney, Niall, Kavelaars, J, Kinney, J, Li, Ting S, Lundgren, B, Margutti, R, Narayan, G, Nord, B, Norman, Dara J, O'Mullane, W, Padhi, S, Peek, J. E. G, Schafer, C, Schwamb, Megan E, Smith, Arfon M, Tollerud, Erik J, Weijmans, Anne-Marie, Szalay, Alexander S

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Performance evaluation of R with Intel Xeon Phi coprocessor von El-Khamra, Yaakoub, Gaffney, Niall, Walling, David, Wernert, Eric, Weijia Xu, Hui Zhang

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FanStore: Enabling Efficient and Scalable I/O for Distributed Deep Learning von Zhang, Zhao, Huang, Lei, Manor, Uri, Fang, Linjing, Merlo, Gabriele, Michoski, Craig, Cazes, John, Gaffney, Niall

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