GenAPI: a tool for gene absence-presence identification in fragmented bacterial genome sequences von Gabrielaite, Migle, Marvig, Rasmus L

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Circulating cell free DNA during definitive chemo-radiotherapy in non-small cell lung cancer patients - initial observations von Nygård, Lotte, Ahlborn, Lise B, Persson, Gitte F, Chandrananda, Dineika, Langer, Jonathan W, Fischer, Barbara M, Langer, Seppo W, Gabrielaite, Miglė, Kjær, Andreas, Rosenfeld, Nitzan, Mouliere, Florent, Østrup, Olga, Vogelius, Ivan R, Bentzen, Søren M

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Deep-sequencing of viral genomes from a large and diverse cohort of treatment-naive HIV-infected persons shows associations between intrahost genetic diversity and viral load von Gabrielaite, Migle, Bennedbæk, Marc, Rasmussen, Malthe Sebro, Kan, Virginia, Furrer, Hansjakob, Flisiak, Robert, Losso, Marcelo, Lundgren, Jens D, Marvig, Rasmus L

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Gene Loss and Acquisition in Lineages of Pseudomonas aeruginosa Evolving in Cystic Fibrosis Patient Airways von Gabrielaite, Migle, Johansen, Helle K., Molin, Søren, Nielsen, Finn C., Marvig, Rasmus L.

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Clinical characterization and identification of rare genetic variants in atypical hemolytic uremic syndrome: A Swedish retrospective observational study von Åkesson, Alexander, Martin, Myriam, Blom, Anna M., Rossing, Maria, Gabrielaite, Migle, Zetterberg, Eva, Klintman, Jenny

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Induction of Broad β-lactam Resistance in Achromobacter ruhlandii by Exposure to Ticarcillin Is Primarily Linked to Substitutions in Murein Peptide Ligase Mpl von Andersen, Camilla, Gabrielaite, Migle, Nørskov-Lauritsen, Niels

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Added Value of Reanalysis of Whole Exome- and Whole Genome Sequencing Data From Patients Suspected of Primary Immune Deficiency Using an Extended Gene Panel and Structural Variatio... von Mørup, Sara Bohnstedt, Nazaryan-Petersen, Lusine, Gabrielaite, Migle, Reekie, Joanne, Marquart, Hanne V., Hartling, Hans Jakob, Marvig, Rasmus L., Katzenstein, Terese L., Masmas, Tania N., Lundgren, Jens, Murray, Daniel D., Helleberg, Marie, Borgwardt, Line

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Genomic and Phenotypic Evolution of Achromobacter xylosoxidans during Chronic Airway Infections of Patients with Cystic Fibrosis von Khademi, S M Hossein, Gabrielaite, Migle, Paulsson, Magnus, Knulst, Mattis, Touriki, Eleni, Marvig, Rasmus L, Påhlman, Lisa I

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Transmission and Antibiotic Resistance of Achromobacter in Cystic Fibrosis von Gabrielaite, Migle, Bartell, Jennifer A, Nørskov-Lauritsen, Niels, Pressler, Tacjana, Nielsen, Finn C, Johansen, Helle K, Marvig, Rasmus L

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Outcome of an enhanced diagnostic pipeline for patients suspected of inherited thrombocytopenia von Leinøe, Eva, Gabrielaite, Migle, Østrup, Olga, Funding, Eva, Greinacher, Andreas, Ostrowski, Sisse R., Zetterberg, Eva, Rossing, Maria

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The Copenhagen founder variant GP1BA c.58T>G is the most frequent cause of inherited thrombocytopenia in Denmark von Leinøe, Eva, Brøns, Nanna, Rasmussen, Andreas Ørslev, Gabrielaite, Migle, Zaninetti, Carlo, Palankar, Raghavendra, Zetterberg, Eva, Rosthøj, Steen, Ostrowski, Sisse Rye, Rossing, Maria

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A Comparison of Tools for Copy-Number Variation Detection in Germline Whole Exome and Whole Genome Sequencing Data von Gabrielaite, Migle, Torp, Mathias Husted, Rasmussen, Malthe Sebro, Andreu-Sánchez, Sergio, Vieira, Filipe Garrett, Pedersen, Christina Bligaard, Kinalis, Savvas, Madsen, Majbritt Busk, Kodama, Miyako, Demircan, Gül Sude, Simonyan, Arman, Yde, Christina Westmose, Olsen, Lars Rønn, Marvig, Rasmus L, Østrup, Olga, Rossing, Maria, Nielsen, Finn Cilius, Winther, Ole, Bagger, Frederik Otzen

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Associations of functional human leucocyte antigen class I groups with HIV viral load in a heterogeneous cohort von Zucco, Adrian G, Bennedbæk, Marc, Ekenberg, Christina, Gabrielaite, Migle, Leung, Preston, Polizzotto, Mark N, Kan, Virginia, Murray, Daniel D, Lundgren, Jens D, MacPherson, Cameron R

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Persistence and genetic adaptation of Pseudomonas aeruginosa in patients with chronic obstructive pulmonary disease von Eklöf, Josefin, Misiakou, Maria A., Sivapalan, Pradeesh, Armbruster, Karin, Browatzki, Andrea, Nielsen, Thyge L., Lapperre, Therese S., Andreassen, Helle F., Janner, Julie, Ulrik, Charlotte S., Gabrielaite, Migle, Johansen, Helle K., Jensen, Annemette, Nielsen, Tine V., Hertz, Frederik B., Ghathian, Khaled, Calum, Henrik, Wilcke, Torgny, Seersholm, Niels, Jensen, Jens-Ulrik S., Marvig, Rasmus L.

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Human Immunotypes Impose Selection on Viral Genotypes Through Viral Epitope Specificity von Gabrielaite, Migle, Bennedbæk, Marc, Zucco, Adrian G, Ekenberg, Christina, Murray, Daniel D, Kan, Virginia L, Touloumi, Giota, Vandekerckhove, Linos, Turner, Dan, Neaton, James, Lane, H Clifford, Safo, Sandra, Arenas-Pinto, Alejandro, Polizzotto, Mark N, Günthard, Huldrych F, Lundgren, Jens D, Marvig, Rasmus L

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High frequency of pathogenic germline variants within homologous recombination repair in patients with advanced cancer von Bertelsen, Birgitte, Tuxen, Ida Viller, Yde, Christina Westmose, Gabrielaite, Migle, Torp, Mathias Husted, Kinalis, Savvas, Oestrup, Olga, Rohrberg, Kristoffer, Spangaard, Iben, Santoni-Rugiu, Eric, Wadt, Karin, Mau-Sorensen, Morten, Lassen, Ulrik, Nielsen, Finn Cilius

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Human immunotypes impose selection on viral genotypes through viral epitope specificity von Gabrielaite, Migle, Bennedbæk, Marc, Zucco, Adrian G, Ekenberg, Christina, Murray, Daniel D, Kan, Virginia L, Touloumi, Giota, Vandekerckhove, Linos, Turner, Dan, Neaton, James, Lane, H Clifford, Safo, Sandra, Arenas-Pinto, Alejandro, Polizzotto, Mark N, Günthard, Huldrych F, Lundgren, Jens D, Marvig, Rasmus L

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Genetic screening of children with suspected inherited bleeding disorders von Andersson, Nadine G., Rossing, Maria, Fager Ferrari, Marcus, Gabrielaite, Migle, Leinøe, Eva, Ljung, Rolf, Mårtensson, Annika, Norström, Eva, Zetterberg, Eva

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Achromobacter spp. genetic adaptation in cystic fibrosis von Gabrielaite, Migle, Nielsen, Finn C, Johansen, Helle K, Marvig, Rasmus L

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Emergence and spread of SARS-CoV-2 lineage B.1.620 with variant of concern-like mutations and deletions von Dudas, Gytis, Hong, Samuel L, Potter, Barney, Calvignac-Spencer, Sebastien, Niatou-Singa, Frederic S, Tombolomako, Thais B, Fuh-Neba, Terence, Vickos, Ulrich, Ulrich, Markus, Leendertz, Fabian H, Khan, Kamran, Huber, Carmen, Watts, Alexander, Olendraite, Ingrida, Snijder, Joost, Wijnant, Kim N, Bonvin, Alexandre M.J.J, Martres, Pascale, Behillil, Sylvie, Ayouba, Ahidjo, Maidadi, Martin Foudi, Djomsi, Dowbiss Meta, Godwe, Celestin, Butel, Christelle, Simaitis, Aistis, Gabrielaite, Migle, Katenaite, Monika, Norvilas, Rimvydas, Raugaite, Ligita, Koyaweda, Giscard Wilfried, Kandou, Jephte Kaleb, Jonikas, Rimvydas, Nasvytiene, Inga, Zemeckiene, Zivile, Gecys, Dovydas, Tamusauskaite, Kamile, Norkiene, Milda, Vasiliunaite, Emilija, Ziogiene, Danguole, Timinskas, Albertas, Sukys, Marius, Sarauskas, Mantas, Alzbutas, Gediminas, Aziza, Adrienne Amuri, Lusamaki, Eddy Kinganda, Cigolo, Jean-Claude Makangara, Mawete, Francisca Muyembe, Lofiko, Emmanuel Lokilo, Kingebeni, Placide Mbala, Tamfum, Jean-Jacques Muyembe, Belizaire, Marie Roseline Darnycka, Essomba, Rene Ghislain, Assoumou, Marie Claire Okomo, Mboringong, Akenji Blaise, Dieng, Alle Baba, Juozapaite, Dovile, Hosch, Salome, Obama, Justino, Ayekaba, Mitoha Ondo'o, Naumovas, Daniel, Pautienius, Arnoldas, Rafai, Clotaire Donatien, Vitkauskiene, Astra, Ugenskiene, Rasa, Gedvilaite, Alma, Cereskevicius, Darius, Lesauskaite, Vaiva, Zemaitis, Lukas, Griskevicius, Laimonas, Baele, Guy

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