An Oncolytic Adenovirus Targeting Transforming Growth Factor β Inhibits Protumorigenic Signals and Produces Immune Activation: A Novel Approach to Enhance Anti-PD-1 and Anti-CTLA-4... von Yang, Yuefeng, Xu, Weidong, Peng, Di, Wang, Hao, Zhang, Xiaoyan, Wang, Hua, Xiao, Fengjun, Zhu, Yitan, Ji, Yuan, Gulukota, Kamalakar, Helseth, Jr, Donald L, Mangold, Kathy A, Sullivan, Megan, Kaul, Karen, Wang, Edward, Prabhakar, Bellur S, Li, Jinnan, Wu, Xuejie, Wang, Lisheng, Seth, Prem

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Zodiac: A Comprehensive Depiction of Genetic Interactions in Cancer by Integrating TCGA Data von Zhu, Yitan, Xu, Yanxun, Helseth, Jr, Donald L, Gulukota, Kamalakar, Yang, Shengjie, Pesce, Lorenzo L, Mitra, Riten, Müller, Peter, Sengupta, Subhajit, Guo, Wentian, Silverstein, Jonathan C, Foster, Ian, Parsad, Nigel, White, Kevin P, Ji, Yuan

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Associations of circulating cell-free DNA (cfDNA) and clinical outcomes in metastatic castrate-resistant prostate cancer (mCRPC) von Shevrin, Daniel H., Yang, Mathew, Imas, Polina, Gulukota, Kamalakar

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SILO: A Computational Method for Detecting Copy Number Gain in Clinical Specimens Analyzed on a Next-Generation Sequencing Platform von Miller, Nicholas, Bouma, Michael, Sabatini, Linda, Gulukota, Kamalakar

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SILO von Miller, Nicholas, Bouma, Michael, Sabatini, Linda, Gulukota, Kamalakar

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Germline Mutations in ATM and BRCA1/2 Distinguish Risk for Lethal and Indolent Prostate Cancer and are Associated with Early Age at Death von Na, Rong, Zheng, S. Lilly, Han, Misop, Yu, Hongjie, Jiang, Deke, Shah, Sameep, Ewing, Charles M, Zhang, Liti, Novakovic, Kristian, Petkewicz, Jacqueline, Gulukota, Kamalakar, Helseth Jr, Donald L, Quinn, Margo, Humphries, Elizabeth, Wiley, Kathleen E, Isaacs, Sarah D, Wu, Yishuo, Liu, Xu, Zhang, Ning, Wang, Chi-Hsiung, Khandekar, Janardan, Hulick, Peter J, Shevrin, Daniel H, Cooney, Kathleen A, Shen, Zhoujun, Partin, Alan W, Carter, H. Ballentine, Carducci, Michael A, Eisenberger, Mario A, Denmeade, Sam R, McGuire, Michael, Walsh, Patrick C, Helfand, Brian T, Brendler, Charles B, Ding, Qiang, Xu, Jianfeng, Isaacs, William B

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Predicting GPCR–G-protein coupling using hidden Markov models von Sreekumar, Kodangattil R., Huang, Youping, Pausch, Mark H., Gulukota, Kamalakar

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Ultra-fast local-haplotype variant calling using paired-end DNA-sequencing data reveals somatic mosaicism in tumor and normal blood samples von Sengupta, Subhajit, Gulukota, Kamalakar, Zhu, Yitan, Ober, Carole, Naughton, Katherine, Wentworth-Sheilds, William, Ji, Yuan

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A BAYESIAN FEATURE ALLOCATION MODEL FOR TUMOR HETEROGENEITY von Lee, Juhee, Müller, Peter, Gulukota, Kamalakar, Ji, Yuan

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MAD Bayes for Tumor Heterogeneity—Feature Allocation With Exponential Family Sampling von Xu, Yanxun, Müller, Peter, Yuan, Yuan, Gulukota, Kamalakar, Ji, Yuan

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Bayesian inference for intratumour heterogeneity in mutations and copy number variation von Lee, Juhee, Müller, Peter, Sengupta, Subhajit, Gulukota, Kamalakar, Ji, Yuan

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LyP-1-Modified Oncolytic Adenoviruses Targeting Transforming Growth Factor β Inhibit Tumor Growth and Metastases and Augment Immune Checkpoint Inhibitor Therapy in Breast Cancer Mo... von Xu, Weidong, Yang, Yuefeng, Hu, Zebin, Head, Maria, Mangold, Kathy A., Sullivan, Megan, Wang, Edward, Saha, Poornima, Gulukota, Kamalakar, Helseth, Donald L., Guise, Theresa, Prabhkar, Bellur S., Kaul, Karen, Schreiber, Hans, Seth, Prem

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A Bayesian feature allocation model for tumor heterogeneity von Lee, Juhee, Müller, Peter, Kamalakar Gulukota, Ji, Yuan

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Two complementary methods for predicting peptides binding major histocompatibility complex molecules von Gulukota, Kamalakar, Sidney, John, Sette, Alessandro, DeLisi, Charles

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Direct observation of genomic heterogeneity through local haplotyping analysis von Gulukota, Kamalakar, Helseth, Jr, Donald L, Khandekar, Janardan D

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Computational determination of the structure of rat Fc bound to the neonatal Fc receptor von Weng, Z, Gulukota, K, Vaughn, D E, Bjorkman, P J, DeLisi, C

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MAD Bayes for Tumor Heterogeneity Feature Allocation with Non-Normal Sampling von Xu, Yanxun, Mueller, Peter, Yuan, Yuan, Kamalakar Gulukota, Ji, Yuan

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Bayesian Feature Allocation Models for Tumor Heterogeneity von Lee, Juhee, Müller, Peter, Sengupta, Subhajit, Gulukota, Kamalakar, Ji, Yuan

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Skipping a step with neural nets von Gulukota, Kamalakar

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Statistical Mechanics of Kinetic Proofreading in Protein Folding In vivo von Gulukota, Kamalakar, Wolynes, Peter G.

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