DeepPeptide predicts cleaved peptides in proteins using conditional random fields von Teufel, Felix, Refsgaard, Jan Christian, Madsen, Christian Toft, Stahlhut, Carsten, Grønborg, Mads, Winther, Ole, Madsen, Dennis

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Evolutionary insights into premetazoan functions of the neuronal protein homer von Burkhardt, Pawel, Grønborg, Mads, McDonald, Kent, Sulur, Tara, Wang, Qi, King, Nicole

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Deorphanizing Peptides Using Structure Prediction von Teufel, Felix, Refsgaard, Jan C., Kasimova, Marina A., Deibler, Kristine, Madsen, Christian T., Stahlhut, Carsten, Grønborg, Mads, Winther, Ole, Madsen, Dennis

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Late motor decline after accomplished remyelination: Impact for progressive multiple sclerosis von Manrique-Hoyos, Natalia, Jürgens, Tanja, Grønborg, Mads, Kreutzfeldt, Mario, Schedensack, Mariann, Kuhlmann, Tanja, Schrick, Christina, Brück, Wolfgang, Urlaub, Henning, Simons, Mikael, Merkler, Doron

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Clinical and proteomic profiles of chronic kidney disease in heart failure with reduced and preserved ejection fraction von Voordes, Geert H.D., Voors, Adriaan A., Hoegl, Annabelle, Madsen, Christian T., van Essen, Bart J., Ouwerkerk, Wouter, Tromp, Jasper, de la Rambelje, Mark A., Grønborg, Mads, Refsgaard, Jan C., Lang, Chim C., Barascuk-Michaelsen, Natasha, Damman, Kevin

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A Proteomic Approach for Quantitation of Phosphorylation Using Stable Isotope Labeling in Cell Culture von Ibarrola, Nieves, Kalume, Dario E, Gronborg, Mads, Iwahori, Akiko, Pandey, Akhilesh

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Xenotropic retrovirus Bxv1 in human pancreatic β cell lines von Kirkegaard, Jeannette S, Ravassard, Philippe, Ingvarsen, Signe, Diedisheim, Marc, Bricout-Neveu, Emilie, Grønborg, Mads, Frogne, Thomas, Scharfmann, Raphael, Madsen, Ole D, Rescan, Claude, Albagli, Olivier

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Research Resource: A Dual Proteomic Approach Identifies Regulated Islet Proteins During β-Cell Mass Expansion In Vivo von Horn, Signe, Kirkegaard, Jeannette S, Hoelper, Soraya, Seymour, Philip A, Rescan, Claude, Nielsen, Jens H, Madsen, Ole D, Jensen, Jan N, Krüger, Marcus, Grønborg, Mads, Ahnfelt-Rønne, Jonas

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Regulation of exosome secretion by Rab35 and its GTPase-activating proteins TBC1D10A-C von Hsu, Chieh, Morohashi, Yuichi, Yoshimura, Shin-ichiro, Manrique-Hoyos, Natalia, Jung, SangYong, Lauterbach, Marcel A, Bakhti, Mostafa, Grønborg, Mads, Möbius, Wiebke, Rhee, JeongSeop, Barr, Francis A, Simons, Mikael

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A Proteomic Analysis of Human Bile von Kristiansen, Troels Zakarias, Bunkenborg, Jakob, Gronborg, Mads, Molina, Henrik, Thuluvath, Paul J, Argani, Pedram, Goggins, Michael G, Maitra, Anirban, Pandey, Akhilesh

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Molecular Profiling of Synaptic Vesicle Docking Sites Reveals Novel Proteins but Few Differences between Glutamatergic and GABAergic Synapses von Boyken, Janina, Grønborg, Mads, Riedel, Dietmar, Urlaub, Henning, Jahn, Reinhard, Chua, John Jia En

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Casein kinase 2 binds to the C terminus of Na+/H+ exchanger 3 (NHE3) and stimulates NHE3 basal activity by phosphorylating a separate site in NHE3 von Sarker, Rafiquel, Grønborg, Mads, Cha, Boyoung, Mohan, Sachin, Chen, Yueping, Pandey, Akhilesh, Litchfield, David, Donowitz, Mark, Li, Xuhang

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A sandwich enzyme-linked immunosorbent assay for the quantification of insoluble membrane and scaffold proteins von Geumann, Constanze, Grønborg, Mads, Hellwig, Michaela, Martens, Henrik, Jahn, Reinhard

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Analysis artefacts of the INS-IGF2 fusion transcript von Wernersson, Rasmus, Frogne, Thomas, Rescan, Claude, Hansson, Lena, Bruun, Christine, Grønborg, Mads, Jensen, Jan Nygaard, Madsen, Ole Dragsbæk

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Proteomic screening of glutamatergic mouse brain synaptosomes isolated by fluorescence activated sorting von Biesemann, Christoph, Grønborg, Mads, Luquet, Elisa, Wichert, Sven P, Bernard, Véronique, Bungers, Simon R, Cooper, Ben, Varoqueaux, Frédérique, Li, Liyi, Byrne, Jennifer A, Urlaub, Henning, Jahn, Olaf, Brose, Nils, Herzog, Etienne

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Combining mass spectrometry and machine learning to discover bioactive peptides von Madsen, Christian T., Refsgaard, Jan C., Teufel, Felix G., Kjærulff, Sonny K., Wang, Zhe, Meng, Guangjun, Jessen, Carsten, Heljo, Petteri, Jiang, Qunfeng, Zhao, Xin, Wu, Bo, Zhou, Xueping, Tang, Yang, Jeppesen, Jacob F., Kelstrup, Christian D., Buckley, Stephen T., Tullin, Søren, Nygaard-Jensen, Jan, Chen, Xiaoli, Zhang, Fang, Olsen, Jesper V., Han, Dan, Grønborg, Mads, de Lichtenberg, Ulrik

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Molecular Anatomy of a Trafficking Organelle von Takamori, Shigeo, Holt, Matthew, Stenius, Katinka, Lemke, Edward A., Grønborg, Mads, Riedel, Dietmar, Urlaub, Henning, Schenck, Stephan, Brügger, Britta, Ringler, Philippe, Müller, Shirley A., Rammner, Burkhard, Gräter, Frauke, Hub, Jochen S., De Groot, Bert L., Mieskes, Gottfried, Moriyama, Yoshinori, Klingauf, Jürgen, Grubmüller, Helmut, Heuser, John, Wieland, Felix, Jahn, Reinhard

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Multi-layered proteomics identifies insulin-induced upregulation of the EphA2 receptor via the ERK pathway which is dependent on low IGF1R level von Jørgensen, Sarah Hyllekvist, Emdal, Kristina Bennet, Pedersen, Anna-Kathrine, Axelsen, Lene Nygaard, Kildegaard, Helene Faustrup, Demozay, Damien, Pedersen, Thomas Åskov, Grønborg, Mads, Slaaby, Rita, Nielsen, Peter Kresten, Olsen, Jesper Velgaard

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Mass spectrometry-based relative quantification of proteins in precatalytic and catalytically active spliceosomes by metabolic labeling (SILAC), chemical labeling (iTRAQ), and labe... von Schmidt, Carla, Grønborg, Mads, Deckert, Jochen, Bessonov, Sergey, Conrad, Thomas, Lührmann, Reinhard, Urlaub, Henning

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SLP-65 Phosphorylation Dynamics Reveals a Functional Basis for Signal Integration by Receptor-proximal Adaptor Proteins von Oellerich, Thomas, Grønborg, Mads, Neumann, Konstantin, Hsiao, He-Hsuan, Urlaub, Henning, Wienands, Jürgen

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