Strong signatures of selection in the domestic pig genome von Rubin, Carl-Johan, Megens, Hendrik-Jan, Barrio, Alvaro Martinez, Maqbool, Khurram, Sayyab, Shumaila, Schwochow, Doreen, Wang, Chao, Carlborg, Örjan, Jern, Patric, Jørgensen, Claus B, Archibald, Alan L, Fredholm, Merete, Groenen, Martien A. M, Andersson, Leif

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A decade of pig genome sequencing: a window on pig domestication and evolution von Groenen, Martien A M

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Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape von Bosse, Mirte, Megens, Hendrik-Jan, Madsen, Ole, Paudel, Yogesh, Frantz, Laurent A F, Schook, Lawrence B, Crooijmans, Richard P M A, Groenen, Martien A M

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Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA von Amaral, Andreia J, Ferretti, Luca, Megens, Hendrik-Jan, Crooijmans, Richard P M A, Nie, Haisheng, Ramos-Onsins, Sebastian E, Perez-Enciso, Miguel, Schook, Lawrence B, Groenen, Martien A M

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Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication von Paudel, Yogesh, Madsen, Ole, Megens, Hendrik-Jan, Frantz, Laurent A F, Bosse, Mirte, Bastiaansen, John W M, Crooijmans, Richard P M A, Groenen, Martien A M

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A 12 kb multi-allelic copy number variation encompassing a GC gene enhancer is associated with mastitis resistance in dairy cattle von Lee, Young-Lim, Takeda, Haruko, Costa Monteiro Moreira, Gabriel, Karim, Latifa, Mullaart, Erik, Coppieters, Wouter, Appeltant, Ruth, Veerkamp, Roel F, Groenen, Martien A. M, Georges, Michel, Bosse, Mirte, Druet, Tom, Bouwman, Aniek C, Charlier, Carole

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development and characterization of a 60K SNP chip for chicken von Groenen, Martien A.M, Megens, Hendrik-Jan, Zare, Yalda, Warren, Wesley C, Hillier, LaDeana W, Crooijmans, Richard P.M.A, Vereijken, Addie, Okimoto, Ron, Muir, William M, Cheng, Hans H

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Genetic origin, admixture and population history of aurochs (Bos primigenius) and primitive European cattle von Upadhyay, M R, Chen, W, Lenstra, J A, Goderie, C R J, MacHugh, D E, Park, S D E, Magee, D A, Matassino, D, Ciani, F, Megens, H-J, van Arendonk, J A M, Groenen, M A M

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A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content von Tortereau, Flavie, Servin, Bertrand, Frantz, Laurent, Megens, Hendrik-Jan, Milan, Denis, Rohrer, Gary, Wiedmann, Ralph, Beever, Jonathan, Archibald, Alan L, Schook, Lawrence B, Groenen, Martien A M

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Loss of function mutations in essential genes cause embryonic lethality in pigs von Derks, Martijn F L, Gjuvsland, Arne B, Bosse, Mirte, Lopes, Marcos S, van Son, Maren, Harlizius, Barbara, Tan, Beatrice F, Hamland, Hanne, Grindflek, Eli, Groenen, Martien A M, Megens, Hendrik-Jan

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Recent natural selection causes adaptive evolution of an avian polygenic trait von Bosse, Mirte, Spurgin, Lewis G., Laine, Veronika N., Cole, Ella F., Firth, Josh A., Gienapp, Phillip, Gosler, Andrew G., McMahon, Keith, Poissant, Jocelyn, Verhagen, Irene, Groenen, Martien A. M., van Oers, Kees, Sheldon, Ben C., Visser, Marcel E., Slate, Jon

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Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression von Bosse, Mirte, Megens, Hendrik-Jan, Frantz, Laurent A. F., Madsen, Ole, Larson, Greger, Paudel, Yogesh, Duijvesteijn, Naomi, Harlizius, Barbara, Hagemeijer, Yanick, Crooijmans, Richard P. M. A., Groenen, Martien A. M.

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Signatures of diversifying selection in European pig breeds von Wilkinson, Samantha, Lu, Zen H, Megens, Hendrik-Jan, Archibald, Alan L, Haley, Chris, Jackson, Ian J, Groenen, Martien A M, Crooijmans, Richard P M A, Ogden, Rob, Wiener, Pamela

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Identification and characterisation of de novo germline structural variants in two commercial pig lines using trio-based whole genome sequencing von Steensma, Marije J, Lee, Y L, Bouwman, A C, Pita Barros, C, Derks, M F L, Bink, M C A M, Harlizius, B, Huisman, A E, Crooijmans, R P M A, Groenen, M A M, Mulder, H A, Rochus, C M

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Organoids: a promising new in vitro platform in livestock and veterinary research von Kar, Soumya K, Wells, Jerry M, Ellen, Esther D, Te Pas, Marinus F W, Madsen, Ole, Groenen, Martien A M, Woelders, Henri

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Contrast Enhanced Abdominal Ultrasound in the Assessment of Ileal Inflammation in Crohn's Disease: A Comparison with MR Enterography von Horjus Talabur Horje, C S, Bruijnen, R, Roovers, L, Groenen, M J M, Joosten, F B M, Wahab, P J

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Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus von Frantz, Laurent A F, Schraiber, Joshua G, Madsen, Ole, Megens, Hendrik-Jan, Bosse, Mirte, Paudel, Yogesh, Semiadi, Gono, Meijaard, Erik, Li, Ning, Crooijmans, Richard P M A, Archibald, Alan L, Slatkin, Montgomery, Schook, Lawrence B, Larson, Greger, Groenen, Martien A M

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High-resolution structural variants catalogue in a large-scale whole genome sequenced bovine family cohort data von Lee, Young-Lim, Bosse, Mirte, Takeda, Haruko, Moreira, Gabriel Costa Monteiro, Karim, Latifa, Druet, Tom, Oget-Ebrad, Claire, Coppieters, Wouter, Veerkamp, Roel F, Groenen, Martien A M, Georges, Michel, Bouwman, Aniek C, Charlier, Carole

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Integrative QTL mapping and selection signatures in Groningen White Headed cattle inferred from whole-genome sequences von Gonzalez-Prendes, Rayner, Ginja, Catarina, Kantanen, Juha, Ghanem, Nasser, Kugonza, Donald R, Makgahlela, Mahlako L, Groenen, Martien A. M, Crooijmans, Richard P. M. A

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Conservation genomic analysis of domestic and wild pig populations from the Iberian Peninsula von Herrero-Medrano, Juan Manuel, Megens, Hendrik-Jan, Groenen, Martien A M, Ramis, Guillermo, Bosse, Mirte, Pérez-Enciso, Miguel, Crooijmans, Richard P M A

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