Simultaneous Optimization of Biomolecular Energy Functions on Features from Small Molecules and Macromolecules von Park, Hahnbeom, Bradley, Philip, Greisen, Per, Liu, Yuan, Mulligan, Vikram Khipple, Kim, David E, Baker, David, DiMaio, Frank

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Removal of lycopene substrate inhibition enables high carotenoid productivity in Yarrowia lipolytica von Ma, Yongshuo, Liu, Nian, Greisen, Per, Li, Jingbo, Qiao, Kangjian, Huang, Sanwen, Stephanopoulos, Gregory

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Computational redesign of a mononuclear zinc metalloenzyme for organophosphate hydrolysis von Khare, Sagar D, Kipnis, Yakov, Greisen, Per Jr, Takeuchi, Ryo, Ashani, Yacov, Goldsmith, Moshe, Song, Yifan, Gallaher, Jasmine L, Silman, Israel, Leader, Haim, Sussman, Joel L, Stoddard, Barry L, Tawfik, Dan S, Baker, David

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Improvement of a synthetic live bacterial therapeutic for phenylketonuria with biosensor-enabled enzyme engineering von Adolfsen, Kristin J., Callihan, Isolde, Monahan, Catherine E., Greisen, Per Jr, Spoonamore, James, Momin, Munira, Fitch, Lauren E., Castillo, Mary Joan, Weng, Lindong, Renaud, Lauren, Weile, Carl J., Konieczka, Jay H., Mirabella, Teodelinda, Abin-Fuentes, Andres, Lawrence, Adam G., Isabella, Vincent M.

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Sampling and energy evaluation challenges in ligand binding protein design von Dou, Jiayi, Doyle, Lindsey, Greisen, Per, Schena, Alberto, Park, Hahnbeom, Johnsson, Kai, Stoddard, Barry L., Baker, David

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Anchor extension: a structure-guided approach to design cyclic peptides targeting enzyme active sites von Hosseinzadeh, Parisa, Watson, Paris R., Craven, Timothy W., Li, Xinting, Rettie, Stephen, Pardo-Avila, Fátima, Bera, Asim K., Mulligan, Vikram Khipple, Lu, Peilong, Ford, Alexander S., Weitzner, Brian D., Stewart, Lance J., Moyer, Adam P., Di Piazza, Maddalena, Whalen, Joshua G., Greisen, Per Jr, Christianson, David W., Baker, David

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Multi-input chemical control of protein dimerization for programming graded cellular responses von Foight, Glenna Wink, Wang, Zhizhi, Wei, Cindy T., Jr Greisen, Per, Warner, Katrina M., Cunningham-Bryant, Daniel, Park, Keunwan, Brunette, T. J., Sheffler, William, Baker, David, Maly, Dustin J.

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Accurate de novo design of hyperstable constrained peptides von Bhardwaj, Gaurav, Mulligan, Vikram Khipple, Bahl, Christopher D., Gilmore, Jason M., Harvey, Peta J., Cheneval, Olivier, Buchko, Garry W., Pulavarti, Surya V. S. R. K., Kaas, Quentin, Eletsky, Alexander, Huang, Po-Ssu, Johnsen, William A., Greisen, Per Jr, Rocklin, Gabriel J., Song, Yifan, Linsky, Thomas W., Watkins, Andrew, Rettie, Stephen A., Xu, Xianzhong, Carter, Lauren P., Bonneau, Richard, Olson, James M., Coutsias, Evangelos, Correnti, Colin E., Szyperski, Thomas, Craik, David J., Baker, David

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Engineering V‑Type Nerve Agents Detoxifying Enzymes Using Computationally Focused Libraries von Cherny, Izhack, Greisen, Per, Ashani, Yacov, Khare, Sagar D, Oberdorfer, Gustav, Leader, Haim, Baker, David, Tawfik, Dan S

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Computational design of environmental sensors for the potent opioid fentanyl von Bick, Matthew J, Greisen, Per J, Morey, Kevin J, Antunes, Mauricio S, La, David, Sankaran, Banumathi, Reymond, Luc, Johnsson, Kai, Medford, June I, Baker, David

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Overcoming an optimization plateau in the directed evolution of highly efficient nerve agent bioscavengers von Goldsmith, Moshe, Aggarwal, Nidhi, Ashani, Yacov, Jubran, Halim, Greisen, Per Jr, Ovchinnikov, Sergey, Leader, Haim, Baker, David, Sussman, Joel L., Goldenzweig, Adi, Fleishman, Sarel J., Tawfik, Dan S.

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A systematic approach for evaluating the role of surface-exposed loops in trypsin-like serine proteases applied to the 170 loop in coagulation factor VIIa von Sorensen, Anders B., Greisen, Per Jr, Madsen, Jesper J., Lund, Jacob, Andersen, Gorm, Wulff-Larsen, Pernille G., Pedersen, Anette A., Gandhi, Prafull S., Overgaard, Michael T., Østergaard, Henrik, Olsen, Ole H.

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Structure-Based Computational Scanning of Chemical Modification Sites in Biologics von Thomas, Nidhin, Sanyal, Tanmoy, Greisen, Jr, Per, Deibler, Kristine

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A factor VIIIa–mimetic bispecific antibody, Mim8, ameliorates bleeding upon severe vascular challenge in hemophilia A mice von Østergaard, Henrik, Lund, Jacob, Greisen, Per J., Kjellev, Stine, Henriksen, Anette, Lorenzen, Nikolai, Johansson, Eva, Røder, Gustav, Rasch, Morten G., Johnsen, Laust B., Egebjerg, Thomas, Lund, Søren, Rahbek-Nielsen, Henrik, Gandhi, Prafull S., Lamberth, Kasper, Loftager, Mette, Andersen, Lisbeth M., Bonde, Amalie C., Stavenuiter, Fabian, Madsen, Daniel E., Li, Xun, Holm, Thomas L., Ley, Carsten D., Thygesen, Peter, Zhu, Haisun, Zhou, Rong, Thorn, Karina, Yang, Zhiru, Hermit, Mette B., Bjelke, Jais R., Hansen, Bjarne G., Hilden, Ida

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Improving the Developability of an Antigen Binding Fragment by Aspartate Substitutions von Sakhnini, Laila I, Greisen, Per J, Wiberg, Charlotte, Bozoky, Zoltan, Lund, Søren, Wolf Perez, Adriana-Michelle, Karkov, Hanne S, Huus, Kasper, Hansen, Jens-Jacob, Bülow, Leif, Lorenzen, Nikolai, Dainiak, Maria B, Pedersen, Anja K

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New insights into substrate folding preference of plant OSCs von Ma, Yongshuo, Zhou, Yuan, Ovchinnikov, Sergey, Greisen, Per, Huang, Sanwen, Shang, Yi

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Interaction between sodium dodecyl sulfate and membrane reconstituted aquaporins: A comparative study of spinach SoPIP2;1 and E. coli AqpZ von Hansen, Jesper S., Vararattanavech, Ardcharaporn, Plasencia, Inés, Greisen, Per Jr, Bomholt, Julie, Torres, Jaume, Emnéus, Jenny, Hélix-Nielsen, Claus

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Linear rate-equilibrium relations arising from ion channel-bilayer energetic coupling von Greisen, Per Jr, Lum, Kevin, Ashrafuzzaman, Md, Greathouse, Denise V, Andersen, Olaf S, Lundbæk, Jens A

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Optimizing selectivity of anion hydrophobic multimodal chromatography for purification of a single‐chain variable fragment von Sakhnini, Laila I., Pedersen, Anja K., León, Ileana Rodríguez, Greisen, Per J., Hansen, Jens Jacob, Vester‐Christensen, Malene B., Bülow, Leif, Dainiak, Maria B.

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Computational design of N-linked glycans for high throughput epitope profiling von Per, Jr, Greisen, Yi, Li, Zhou, Rong, Zhou, Jian, Johansson, Eva, Dong, Tiantang, Liu, Haimo, Johnsen, Laust B, Lund, Søren, Svensson, L Anders, Zhu, Haisun, Thomas, Nidhin, Yang, Zhiru, Østergaard, Henrik

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