Instability of 8E5 calibration standard revealed by digital PCR risks inaccurate quantification of HIV DNA in clinical samples by qPCR von Busby, Eloise, Whale, Alexandra S., Ferns, R. Bridget, Grant, Paul R., Morley, Gary, Campbell, Jonathan, Foy, Carole A., Nastouli, Eleni, Huggett, Jim F., Garson, Jeremy A.

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Detection of Rare Drug Resistance Mutations by Digital PCR in a Human Influenza A Virus Model System and Clinical Samples von Whale, Alexandra S, Bushell, Claire A, Grant, Paul R, Cowen, Simon, Gutierrez-Aguirre, Ion, O'Sullivan, Denise M, Žel, Jana, Milavec, Mojca, Foy, Carole A, Nastouli, Eleni, Garson, Jeremy A, Huggett, Jim F

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Tracing hepatitis B virus to the 16th century in a Korean mummy von Kahila Bar-Gal, Gila, Kim, Myeung Ju, Klein, Athalia, Shin, Dong Hoon, Oh, Chang Seok, Kim, Jong Wan, Kim, Tae-Hyun, Kim, Seok Bae, Grant, Paul R., Pappo, Orit, Spigelman, Mark, Shouval, Daniel

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H1N1 pneumonitis treated with intravenous zanamivir von Kidd, I Michael, Dr, Down, Jim, FRCA, Nastouli, Eleni, FRCPath, Shulman, Rob, DHCPharm, Grant, Paul R, PhD, Howell, David CJ, MRCP, Singer, Mervyn, FRCP

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Sensitive HIV-1 DNA Pol Next-Generation Sequencing for the Characterisation of Archived Antiretroviral Drug Resistance von Botha, Johannes C, Byott, Matthew, Spyer, Moira J, Grant, Paul R, Gärtner, Kathleen, Chen, Wilson X, Burton, James, Bamford, Alasdair, Waters, Laura J, Giaquinto, Carlo, Turkova, Anna, Vavro, Cindy L, Nastouli, Eleni

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SARS-CoV-2 detection by a clinical diagnostic RT-LAMP assay von Buck, Michael D., Poirier, Enzo Z., Cardoso, Ana, Frederico, Bruno, Canton, Johnathan, Barrell, Sam, Beale, Rupert, Byrne, Richard, Caidan, Simon, Crawford, Margaret, Cubitt, Laura, Gandhi, Sonia, Goldstone, Robert, Grant, Paul R., Gulati, Kiran, Hindmarsh, Steve, Howell, Michael, Hubank, Michael, Instrell, Rachael, Jiang, Ming, Kassiotis, George, Lu, Wei-Ting, MacRae, James I., Martini, Iana, Miller, Davin, Moore, David, Nastouli, Eleni, Nicod, Jerome, Nightingale, Luke, Olsen, Jessica, Oomatia, Amin, O'Reilly, Nicola, Rideg, Anett, Song, Ok-Ryul, Strange, Amy, Swanton, Charles, Turajlic, Samra, Wu, Mary, Reis e Sousa, Caetano

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Minor groove binder modification of widely used TaqMan probe for hepatitis E virus reduces risk of false negative real-time PCR results von Garson, Jeremy A., Ferns, Ruth B., Grant, Paul R., Ijaz, Samreen, Nastouli, Eleni, Szypulska, Renata, Tedder, Richard S.

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Digital PCR dynamic range is approaching that of real-time quantitative PCR von Jones, Gerwyn M., Busby, Eloise, Garson, Jeremy A., Grant, Paul R., Nastouli, Eleni, Devonshire, Alison S., Whale, Alexandra S.

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Whole Blood as an Alternative to Plasma for Detection of Hepatitis C Virus RNA von Daniel, Hubert Darius J, David, Joel, Grant, Paul R, Garson, Jeremy A, Chandy, George M, Abraham, Priya

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Proof-of-Principle for Immune Control of Global HIV-1 Reactivation In Vivo von Smith, Nicola M. G., MIcochova, Petra, Watters, Sarah A., Aasa-Chapman, Marlene M. I., Rabin, Neil, Moore, Sally, Edwards, Simon G., Garson, Jeremy A., Grant, Paul R., Ferns, R. Bridget, Kashuba, Angela, Mayor, Neema P., Schellekens, Jennifer, Marsh, Steven G. E., McMichael, Andrew J., Perelson, Alan S., Pillay, Deenan, Goonetilleke, Nilu, Gupta, Ravindra K.

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Detection of SARS Coronavirus in Plasma by Real-Time RT-PCR von Chan, Paul K.S, Grant, Paul R, Garson, Jeremy A, Tam, John S, Sung, Joseph J.Y, Tedder, Richard S

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Drug Resistance in Human Immunodeficiency Virus Type-1 Infected Zambian Children Using Adult Fixed Dose Combination Stavudine, Lamivudine, and Nevirapine von Gupta, Ravindra K, Ford, Deborah, Mulenga, Veronica, Walker, A Sarah, Kabamba, Desire, Kalumbi, Moxmalama, Grant, Paul R, Ferrier, Alexander, Pillay, Deenan, Gibb, Diana M, Chintu, Chifumbe

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SARS-CoV-2 detection by a clinical diagnostic RT-LAMP assay von Buck, Michael D, Poirier, Enzo Z, Cardoso, Ana, Frederico, Bruno, Canton, Johnathan, Barrell, Sam, Beale, Rupert, Byrne, Richard, Caidan, Simon, Crawford, Margaret, Cubitt, Laura, Gandhi, Sonia, Goldstone, Robert, Grant, Paul R, Gulati, Kiran, Hindmarsh, Steve, Howell, Michael, Hubank, Michael, Instrell, Rachael, Jiang, Ming, Kassiotis, George, Lu, Wei-Ting, MacRae, James I, Martini, Iana, Miller, Davin, Moore, David, Nastouli, Eleni, Nicod, Jerome, Nightingale, Luke, Olsen, Jessica, Oomatia, Amin, O'Reilly, Nicola, Rideg, Anett, Song, Ok-Ryul, Strange, Amy, Swanton, Charles, Turajlic, Samra, Wu, Mary, Reis e Sousa, Caetano

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Hepatitis C virus window-phase infections: closing the window on hepatitis C virus von Tuke, Philip W., Grant, Paul R., Waite, James, Kitchen, Alan D., Eglin, Roger P., Tedder, Richard S.

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SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway von Willett, Brian J., Grove, Joe, MacLean, Oscar A., Wilkie, Craig, De Lorenzo, Giuditta, Furnon, Wilhelm, Cantoni, Diego, Scott, Sam, Logan, Nicola, Ashraf, Shirin, Manali, Maria, Szemiel, Agnieszka, Cowton, Vanessa, Vink, Elen, Harvey, William T., Davis, Chris, Asamaphan, Patawee, Smollett, Katherine, Tong, Lily, Orton, Richard, Hughes, Joseph, Holland, Poppy, Silva, Vanessa, Pascall, David J., Puxty, Kathryn, da Silva Filipe, Ana, Yebra, Gonzalo, Shaaban, Sharif, Holden, Matthew T. G., Pinto, Rute Maria, Gunson, Rory, Templeton, Kate, Murcia, Pablo R., Patel, Arvind H., Klenerman, Paul, Dunachie, Susanna, Haughney, John, Robertson, David L., Palmarini, Massimo, Ray, Surajit, Thomson, Emma C.

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Pandemic peak SARS-CoV-2 infection and seroconversion rates in London frontline health-care workers von Houlihan, Catherine F, Kelly, Gavin, Spyer, Moira J, Nastouli, Eleni, Allen, Zoe, Ambrose, Karen, Barns-Jenkins, Caitlin, Basu, Souradeep, Buck, Michael D, Cardoso, Ana, Carter, Nick, Carvalho, Luiz, Chen, Qu, Churchward, Laura, Cottrell, Sally, Davison, Dara, Debaisieux, Solene, Diaz-Romero, Monica, Diring, Jessica, Driscoll, Paul C, Edwards, Amelia, Evangelopoulos, Dimitrios, Ferron, Aaron, Fitz, Dan, Fleming, James, Gaiba, Alessandra, Goldstone, Robert, Halldorsson, Steinar, Hoskins, Beth, Houlihan, Catherine F, Hoyle, Jacqueline, Htun, Mint R, Hubank, Michael, Hughes, Deborah, Instrell, Rachael, Jamal-Hanjani, Mariam, Johnson, Mark, Kotzampaltiris, Paul, Kousis, Konstantinos, Kucharska, Ania, Lee, Stacey-Ann, Lu, Wei-Ting, MacRae, James I, McCoy, Laura E, Minutti, Carlos M, Molina-Arcas, Miriam, Moore, David, Moraiti, Anastasia, Nutan, Savita, Oedekoven, Caroline, O'Neill, Olga, Osborne, Neil, Papayannopoulos, Venizelos, Patel, Yogen, Paun, Oana, Perez Caballero, Ana, Perez-Lloret, Jimena, Pollitt, Marc, Shah Punatar, Rajvee, Ramaprasad, Abhinay, Richardson, Kayleigh, Ridewood, Sophie, Rossi, Alice, Rowan, Andrew, Sahai, Erik, Sawyer, Chelsea, Spyer, Moira J, Steel, Louisa, Strange, Amy, Swanton, Charles, Tautz-Davis, Zoe H, Taylor, Gunes, Toolan-Kerr, Patrick, Torelli, Francesca, Toteva, Tea, Ule, Jernej, Wenman, Catharina, Williams, Matthew J, Wright, Joshua, Xiang, Zheng, Matthews, Rebecca, Severn, Abigail, Michie, Susan, Shahmanesh, Maryam, Lukha, Hinal, Davies, Claudia, Williams, Bethany, Riddell, Andrew, Bartolovic, Kerol, Russell, Emma, Carr, Lotte, Crayton, Elise, Meyer, Carly, Vora, Nina, Stoltenberg, Andrea, Byrne, Tom, Gilson, Richard, Kelly, Gavin, Roberts, Fiona, Hatipoglu, Emine

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COVID-19 due to the B.1.617.2 (Delta) variant compared to B.1.1.7 (Alpha) variant of SARS-CoV-2: a prospective observational cohort study von Kläser, Kerstin, Molteni, Erika, Graham, Mark, Canas, Liane S., Österdahl, Marc F., Antonelli, Michela, Chen, Liyuan, Deng, Jie, Murray, Benjamin, Kerfoot, Eric, Wolf, Jonathan, May, Anna, Fox, Ben, Capdevila, Joan, Modat, Marc, Hammers, Alexander, Spector, Tim D., Steves, Claire J., Sudre, Carole H., Ourselin, Sebastien, Duncan, Emma L.

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Scalable and robust SARS-CoV-2 testing in an academic center von Aitken, Jim, Ambrose, Karen, Barrell, Sam, Beale, Rupert, Bineva-Todd, Ganka, Biswas, Dhruva, Byrne, Richard, Caidan, Simon, Cherepanov, Peter, Churchward, Laura, Clark, Graham, Crawford, Margaret, Cubitt, Laura, Dearing, Vicky, Earl, Christopher, Edwards, Amelia, Ekin, Chris, Fidanis, Efthymios, Gaiba, Alessandra, Gamblin, Steve, Gandhi, Sonia, Goldman, Jacki, Goldstone, Robert, Grant, Paul R., Greco, Maria, Heaney, Judith, Hindmarsh, Steve, Houlihan, Catherine F., Howell, Michael, Hubank, Michael, Hughes, Deborah, Instrell, Rachael, Jackson, Deborah, Jamal-Hanjani, Mariam, Jiang, Ming, Johnson, Mark, Jones, Leigh, Kanu, Nnennaya, Kassiotis, George, Kirk, Stuart, Kjaer, Svend, Levett, Andrew, Levett, Lisa, Levi, Marcel, Lu, Wei-Ting, MacRae, James I., Matthews, John, McCoy, Laura E., Moore, Catherine, Moore, David, Nastouli, Eleni, Nicod, Jerome, Nightingale, Luke, Olsen, Jessica, O’Reilly, Nicola, Pabari, Amar, Papayannopoulos, Venizelos, Patel, Namita, Peat, Nigel, Pollitt, Marc, Ratcliffe, Peter, Reis e Sousa, Caetano, Rosa, Annachiara, Rosenthal, Rachel, Roustan, Chloe, Rowan, Andrew, Shin, Gee Yen, Snell, Daniel M., Song, Ok-Ryul, Spyer, Moira J., Strange, Amy, Swanton, Charles, Turner, James M. A., Turner, Melanie, Wack, Andreas, Walker, Philip A., Ward, Sophia, Wong, Wai Keong, Wright, Joshua, Wu, Mary

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SARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2 von Eales, Oliver, Page, Andrew J, de Oliveira Martins, Leonardo, Wang, Haowei, Bodinier, Barbara, Haw, David, Jonnerby, Jakob, Atchison, Christina, Ashby, Deborah, Barclay, Wendy, Taylor, Graham, Cooke, Graham, Ward, Helen, Darzi, Ara, Riley, Steven, Chadeau-Hyam, Marc, Donnelly, Christl A, Elliott, Paul

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Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning von Nickbakhsh, Sema, Hughes, Joseph, Christofidis, Nicolaos, Griffiths, Emily, Shaaban, Sharif, Enright, Jessica, Smollett, Katherine, Nomikou, Kyriaki, Palmalux, Natasha, Tong, Lily, Carmichael, Stephen, Sreenu, Vattipally B., Orton, Richard, Goldstein, Emily J., Tomb, Rachael M., Templeton, Kate, Gunson, Rory N., da Silva Filipe, Ana, Milosevic, Catriona, Thomson, Emma, Robertson, David L., Holden, Matthew T. G., Illingworth, Christopher J. R., Smith-Palmer, Alison

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