Direct metagenomic detection of viral pathogens in nasal and fecal specimens using an unbiased high-throughput sequencing approach von Nakamura, Shota, Yang, Cheng-Song, Sakon, Naomi, Ueda, Mayo, Tougan, Takahiro, Yamashita, Akifumi, Goto, Naohisa, Takahashi, Kazuo, Yasunaga, Teruo, Ikuta, Kazuyoshi, Mizutani, Tetsuya, Okamoto, Yoshiko, Tagami, Michihira, Morita, Ryoji, Maeda, Norihiro, Kawai, Jun, Hayashizaki, Yoshihide, Nagai, Yoshiyuki, Horii, Toshihiro, Iida, Tetsuya, Nakaya, Takaaki

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Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics von BONNAL, Raoul J. P, AERTS, Jan, STROZZI, Francesco, SYME, Rob, VOS, Rutger, WENNBLOM, Trevor J, WOODCROFT, Ben J, KATAYAMA, Toshiaki, PRINS, Pjotr, GITHINJI, George, GOTO, Naohisa, MACLEAN, Dan, MILLER, Chase A, MISHIMA, Hiroyuki, PAGANI, Massimiliano, RAMIREZ-GONZALEZ, Ricardo, SMANT, Geert

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Genetic analysis of genes causing hypertension and stroke in spontaneously hypertensive rats von YAMAMOTO, HIDEYUKI, OKUZAKI, DAISUKE, YAMANISHI, KYOSUKE, XU, YUNFENG, WATANABE, YUKO, YOSHIDA, MOMOKO, YAMASHITA, AKIFUMI, GOTO, NAOHISA, NISHIGUCHI, SEIJI, SHIMADA, KAZUNORI, NOJIMA, HIROSHI, YASUNAGA, TERUO, OKAMURA, HARUKI, MATSUNAGA, HISATO, YAMANISHI, HIROMICHI

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A comprehensive analysis of reassortment in influenza A virus von de Silva, U Chandimal, Tanaka, Hokuto, Nakamura, Shota, Goto, Naohisa, Yasunaga, Teruo

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Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants von Cock, Peter J.A, Fields, Christopher J, Goto, Naohisa, Heuer, Michael L, Rice, Peter M

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How do banks resolve firms’ financial distress? Evidence from Japan von Goto, Naohisa, Uchida, Konari

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Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade von Tachibana, Shin-Ichiro, Sullivan, Steven A, Kawai, Satoru, Nakamura, Shota, Kim, Hyunjae R, Goto, Naohisa, Arisue, Nobuko, Palacpac, Nirianne M Q, Honma, Hajime, Yagi, Masanori, Tougan, Takahiro, Katakai, Yuko, Kaneko, Osamu, Mita, Toshihiro, Kita, Kiyoshi, Yasutomi, Yasuhiro, Sutton, Patrick L, Shakhbatyan, Rimma, Horii, Toshihiro, Yasunaga, Teruo, Barnwell, John W, Escalante, Ananias A, Carlton, Jane M, Tanabe, Kazuyuki

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Production of Large-Diameter Uniform Plasma in mTorr Range Using Microwave Discharge von Yasuyoshi Yasaka, Yasuyoshi Yasaka, Daiki Nozaki, Daiki Nozaki, Kazuya Koga, Kazuya Koga, Makoto Ando, Makoto Ando, Tetsuya Yamamoto, Tetsuya Yamamoto, Naohisa Goto, Naohisa Goto, Nobuo Ishii, Nobuo Ishii, Tamotsu Morimoto, Tamotsu Morimoto

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The 2006 NESCent Phyloinformatics Hackathon: A Field Report von Lapp, Hilmar, Bala, Sendu, Balhoff, James P., Bouck, Amy, Goto, Naohisa, Holder, Mark, Holland, Richard, Holloway, Alisha, Katayama, Toshiaki, Lewis, Paul O., Mackey, Aaron J., Osborne, Brian I., Piel, William H., Pond, Sergei L. Kosakovsky, Poon, Art F.Y., Qiu, Wei-Gang, Stajich, Jason E., Stoltzfus, Arlin, Thierer, Tobias, Vilella, Albert J., Vos, Rutger A., Zmasek, Christian M., Zwickl, Derrick J., Vision, Todd J.

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Is corporate governance important for regulated firms’ shareholders? von Nogata, Daisuke, Uchida, Konari, Goto, Naohisa

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Plate-loaded folded monopole antenna on a ground-plane edge von Kuga, Nobuhiro, Matsushima, Hidenao, Goto, Naohisa

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BioHackathon 2015: Semantics of data for life sciences and reproducible research [version 1; peer review: 2 approved] von Vos, Rutger A, Katayama, Toshiaki, Mishima, Hiroyuki, Kawano, Shin, Kawashima, Shuichi, Kim, Jin-Dong, Moriya, Yuki, Tokimatsu, Toshiaki, Yamaguchi, Atsuko, Yamamoto, Yasunori, Wu, Hongyan, Amstutz, Peter, Antezana, Erick, Aoki, Nobuyuki P, Arakawa, Kazuharu, Bolleman, Jerven T, Bolton, Evan, Bonnal, Raoul J. P, Bono, Hidemasa, Burger, Kees, Chiba, Hirokazu, Cohen, Kevin B, Deutsch, Eric W, Fernández-Breis, Jesualdo T, Fu, Gang, Fujisawa, Takatomo, Fukushima, Atsushi, García, Alexander, Goto, Naohisa, Groza, Tudor, Hercus, Colin, Hoehndorf, Robert, Itaya, Kotone, Juty, Nick, Kawashima, Takeshi, Kim, Jee-Hyub, Kinjo, Akira R, Kotera, Masaaki, Kozaki, Kouji, Kumagai, Sadahiro, Kushida, Tatsuya, Lütteke, Thomas, Matsubara, Masaaki, Miyamoto, Joe, Mohsen, Attayeb, Mori, Hiroshi, Naito, Yuki, Nakazato, Takeru, Nguyen-Xuan, Jeremy, Nishida, Kozo, Nishida, Naoki, Nishide, Hiroyo, Ogishima, Soichi, Ohta, Tazro, Okuda, Shujiro, Paten, Benedict, Perret, Jean-Luc, Prathipati, Philip, Prins, Pjotr, Queralt-Rosinach, Núria, Shinmachi, Daisuke, Suzuki, Shinya, Tabata, Tsuyosi, Takatsuki, Terue, Taylor, Kieron, Thompson, Mark, Uchiyama, Ikuo, Vieira, Bruno, Wei, Chih-Hsuan, Wilkinson, Mark, Yamada, Issaku, Yamanaka, Ryota, Yoshitake, Kazutoshi, Yoshizawa, Akiyasu C, Dumontier, Michel, Kosaki, Kenjiro, Takagi, Toshihisa

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A new form of electromagnetics (3) : Two kinds of charges making electric and magnetic fields von GOTO, Naohisa

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BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains von Katayama, Toshiaki, Wilkinson, Mark D, Aoki-Kinoshita, Kiyoko F, Kawashima, Shuichi, Yamamoto, Yasunori, Yamaguchi, Atsuko, Okamoto, Shinobu, Kawano, Shin, Kim, Jin-Dong, Wang, Yue, Wu, Hongyan, Kano, Yoshinobu, Ono, Hiromasa, Bono, Hidemasa, Kocbek, Simon, Aerts, Jan, Akune, Yukie, Antezana, Erick, Arakawa, Kazuharu, Aranda, Bruno, Baran, Joachim, Bolleman, Jerven, Bonnal, Raoul Jp, Buttigieg, Pier Luigi, Campbell, Matthew P, Chen, Yi-An, Chiba, Hirokazu, Cock, Peter Ja, Cohen, K Bretonnel, Constantin, Alexandru, Duck, Geraint, Dumontier, Michel, Fujisawa, Takatomo, Fujiwara, Toyofumi, Goto, Naohisa, Hoehndorf, Robert, Igarashi, Yoshinobu, Itaya, Hidetoshi, Ito, Maori, Iwasaki, Wataru, Kalaš, Matúš, Katoda, Takeo, Kim, Taehong, Kokubu, Anna, Komiyama, Yusuke, Kotera, Masaaki, Laibe, Camille, Lapp, Hilmar, Lütteke, Thomas, Marshall, M Scott, Mori, Takaaki, Mori, Hiroshi, Morita, Mizuki, Murakami, Katsuhiko, Nakao, Mitsuteru, Narimatsu, Hisashi, Nishide, Hiroyo, Nishimura, Yosuke, Nystrom-Persson, Johan, Ogishima, Soichi, Okamura, Yasunobu, Okuda, Shujiro, Oshita, Kazuki, Packer, Nicki H, Prins, Pjotr, Ranzinger, Rene, Rocca-Serra, Philippe, Sansone, Susanna, Sawaki, Hiromichi, Shin, Sung-Ho, Splendiani, Andrea, Strozzi, Francesco, Tadaka, Shu, Toukach, Philip, Uchiyama, Ikuo, Umezaki, Masahito, Vos, Rutger, Whetzel, Patricia L, Yamada, Issaku, Yamasaki, Chisato, Yamashita, Riu, York, William S, Zmasek, Christian M, Kawamoto, Shoko, Takagi, Toshihisa

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Finding Conserved Amino Acid Sequences among Prokaryotic Proteomes von Goto, Naohisa, Kurokawa, Ken, Yasunaga, Teruo

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Computational search for over-represented 8-mers within the 5′-regulatory regions of 634 mouse testis-specific genes von Yamashita, Akifumi, Goto, Naohisa, Nishiguchi, Seiji, Shimada, Kazunori, Yamanishi, Hiromichi, Yasunaga, Teruo

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Searching the Most Conserved Sequence in Bacterial Whole Genomes von Kurokawa, Ken, Goto, Naohisa, Yasunaga, Teruo

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BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains von Katayama, Toshiaki, Wilkinson, Mark D, Aoki-Kinoshita, Kiyoko F, Kawashima, Shuichi, Yamamoto, Yasunori, Yamaguchi, Atsuko, Okamoto, Shinobu, Kawano, Shin, Kim, Jin-Dong, Wang, Yue, Wu, Hongyan, Kano, Yoshinobu, Ono, Hiromasa, Bono, Hidemasa, Kocbek, Simon, Aerts, Jan, Akune, Yukie, Antezana, Erick, Arakawa, Kazuharu, Aranda, Bruno, Baran, Joachim, Bolleman, Jerven, Bonnal, Raoul J. P, Buttigieg, Pier Luigi, Campbell, Matthew P, Chen, Yi-an, Chiba, Hirokazu, Cock, Peter J. A, Cohen, K. Bretonnel, Constantin, Alexandru, Duck, Geraint, Dumontier, Michel, Fujisawa, Takatomo, Fujiwara, Toyofumi, Goto, Naohisa, Hoehndorf, Robert, Igarashi, Yoshinobu, Itaya, Hidetoshi, Ito, Maori, Iwasaki, Wataru, Kalaš, Matúš, Katoda, Takeo, Kim, Taehong, Kokubu, Anna, Komiyama, Yusuke, Kotera, Masaaki, Laibe, Camille, Lapp, Hilmar, Lütteke, Thomas, Marshall, M. Scott, Mori, Takaaki, Mori, Hiroshi, Morita, Mizuki, Murakami, Katsuhiko, Nakao, Mitsuteru, Narimatsu, Hisashi, Nishide, Hiroyo, Nishimura, Yosuke, Nyström-Persson, Johan, Ogishima, Soichi, Okamura, Yasunobu, Okuda, Shujiro, Oshita, Kazuki, Packer, Nicki H, Prins, Pjotr, Ranzinger, Rene, Rocca-Serra, Philippe, Sansone, Susanna, Sawaki, Hiromichi, Shin, Sung-Ho, Splendiani, Andrea, Strozzi, Francesco, Tadaka, Shu, Toukach, Philip, Uchiyama, Ikuo, Umezaki, Masahito, Vos, Rutger, Whetzel, Patricia L, Yamada, Issaku, Yamasaki, Chisato, Yamashita, Riu, York, William S, Zmasek, Christian M, Kawamoto, Shoko, Takagi, Toshihisa

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The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows von Katayama, Toshiaki, Arakawa, Kazuharu, Nakao, Mitsuteru, Ono, Keiichiro, Aoki-Kinoshita, Kiyoko F, Yamamoto, Yasunori, Yamaguchi, Atsuko, Kawashima, Shuichi, Chun, Hong-Woo, Aerts, Jan, Aranda, Bruno, Barboza, Load Hendrix, Bonnal, Raoul JP, Bruskiewich, Richard, Bryne, Jan C, Fernendez, Jose M, Funahashi, Akira, Gordon, Paul MK, Goto, Naohisa, Groscurth, Andreas, Gutteridge, Alex, Holland, Richard, Kano, Yoshinobu, Kawas, Edward A, Kerhornou, Arnaud, Kibukawa, Eri, Kinjo, Akira R, Kuhn, Michael, Lapp, Hilmar, Lehvaslaiho, Heikki, Nakamura, Hiroyuki, Nakamura, Yasukazu, Nishizawa, Tatsuya, Nobata, Chikashi, Noguchi, Tamotsu, Oinn, Thomas M, Okamoto, Shinobu, Owen, Stuart, Pafilis, Evangelos, Pocock, Matthew, Prins, Pjotr, Ranzinger, Rene, Reisinger, Florian, Salwinski, Lukasz, Schreiber, Mark, Senger, Martin, Shigemoto, Yasumasa, Standley, Daron M, Sugawara, Hideaki, Tashiro, Toshiyuki, Trelles, Oswaldo, Vos, Rutger A, Wilkinson, Mark D, York, William, Zmasek, Christian M, Asai, Kiyoshi, Takagi, Toshihisa

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Computational Studies of gp41 6-Helix Bundle: Do Stabilized Energy of HIV Membrane Fusion Inhibitor C34 and Interaction Energy of gp41 6-Helix Bundle have Good Correlation with the... von Kawashita, Norihito, Tian, Yu-Shi, Yasuda, Masashi, de Silva, U. Chandimal, Kashiwada, Rie, Nakamura, Shota, Goto, Naohisa, Nishikiori, Rika, Okamoto, Kousuke, Kameoka, Masanori, Yasunaga, Teruo, Kawase, Masaya, Ikuta, Kazuyoshi, Takagi, Tatsuya

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