Epigenetic inactivation of the autophagy–lysosomal system in appendix in Parkinson’s disease von Gordevicius, Juozas, Li, Peipei, Marshall, Lee L., Killinger, Bryan A., Lang, Sean, Ensink, Elizabeth, Kuhn, Nathan C., Cui, Wei, Maroof, Nazia, Lauria, Roberta, Rueb, Christina, Siebourg-Polster, Juliane, Maliver, Pierre, Lamp, Jared, Vega, Irving, Manfredsson, Fredric P., Britschgi, Markus, Labrie, Viviane

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aPEAR: an R package for autonomous visualization of pathway enrichment networks von Kerseviciute, Ieva, Gordevicius, Juozas

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Precision Oncology: Artificial Intelligence and DNA Methylation Analysis of Circulating Cell-Free DNA for Lung Cancer Detection von Bahado-Singh, Ray, Vlachos, Kyriacos T, Aydas, Buket, Gordevicius, Juozas, Radhakrishna, Uppala, Vishweswaraiah, Sangeetha

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Maternal Herpesviridae infection during pregnancy alters midbrain dopaminergic signatures in adult offspring von Burmeister, Amanda R., Gordevicius, Juozas, Paul, Emmanuel N., Houck, Christina, George, Sonia, Escobar Galvis, Martha L., Sha, Qiong, Brundin, Patrik, Pospisilik, J. Andrew, Racicot, Karen, Brundin, Lena

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Reversal of biological age in multiple rat organs by young porcine plasma fraction von Horvath, Steve, Singh, Kavita, Raj, Ken, Khairnar, Shraddha I., Sanghavi, Akshay, Shrivastava, Agnivesh, Zoller, Joseph A., Li, Caesar Z., Herenu, Claudia B., Canatelli-Mallat, Martina, Lehmann, Marianne, Habazin, Siniša, Novokmet, Mislav, Vučković, Frano, Solberg Woods, Leah C., Martinez, Angel Garcia, Wang, Tengfei, Chiavellini, Priscila, Levine, Andrew J., Chen, Hao, Brooke, Robert T., Gordevicius, Juozas, Lauc, Gordan, Goya, Rodolfo G., Katcher, Harold L.

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Bacterial Butyrate in Parkinson's Disease Is Linked to Epigenetic Changes and Depressive Symptoms von Xie, Aoji, Ensink, Elizabeth, Li, Peipei, Gordevičius, Juozas, Marshall, Lee L., George, Sonia, Pospisilik, John Andrew, Aho, Velma T.E., Houser, Madelyn C., Pereira, Pedro A.B., Rudi, Knut, Paulin, Lars, Tansey, Malú G., Auvinen, Petri, Brundin, Patrik, Brundin, Lena, Labrie, Viviane, Scheperjans, Filip

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Precise genomic mapping of 5-hydroxymethylcytosine via covalent tether-directed sequencing von Gibas, Povilas, Narmontė, Milda, Staševskij, Zdislav, Gordevičius, Juozas, Klimašauskas, Saulius, Kriukienė, Edita

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Cell-Free DNA Modification Dynamics in Abiraterone Acetate-Treated Prostate Cancer Patients von Gordevičius, Juozas, Kriščiūnas, Algimantas, Groot, Daniel E, Yip, Steven M, Susic, Miki, Kwan, Andrew, Kustra, Rafal, Joshua, Anthony M, Chi, Kim N, Petronis, Art, Oh, Gabriel

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The longitudinal biochemical profiling of TBI in a drop weight model of TBI von Yilmaz, Ali, Liraz-Zaltsman, Sigal, Shohami, Esther, Gordevičius, Juozas, Kerševičiūtė, Ieva, Sherman, Eric, Bahado-Singh, Ray O., Graham, Stewart F.

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Tethered Oligonucleotide-Primed Sequencing, TOP-Seq: A High-Resolution Economical Approach for DNA Epigenome Profiling von Staševskij, Zdislav, Gibas, Povilas, Gordevičius, Juozas, Kriukienė, Edita, Klimašauskas, Saulius

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Cytosine modifications exhibit circadian oscillations that are involved in epigenetic diversity and aging von Oh, Gabriel, Ebrahimi, Sasha, Carlucci, Matthew, Zhang, Aiping, Nair, Akhil, Groot, Daniel E., Labrie, Viviane, Jia, Peixin, Oh, Edward S., Jeremian, Richie H., Susic, Miki, Shrestha, Tenjin C., Ralph, Martin R., Gordevičius, Juozas, Koncevičius, Karolis, Petronis, Art

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Circadian oscillations of cytosine modification in humans contribute to epigenetic variability, aging, and complex disease von Oh, Gabriel, Koncevičius, Karolis, Ebrahimi, Sasha, Carlucci, Matthew, Groot, Daniel Erik, Nair, Akhil, Zhang, Aiping, Kriščiūnas, Algimantas, Oh, Edward S, Labrie, Viviane, Wong, Albert H C, Gordevičius, Juozas, Jia, Peixin, Susic, Miki, Petronis, Art

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Bloom syndrome patients and mice display accelerated epigenetic aging von Lee, Jamie, Zhang, Joshua, Flanagan, Maeve, Martinez, Julian A, Cunniff, Christopher, Kucine, Nicole, Lu, Ake T, Haghani, Amin, Gordevičius, Juozas, Horvath, Steve, Chang, Vivian Y

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Maternal oxytocin treatment at birth increases epigenetic age in male offspring von Danoff, Joshua S., Carter, C. Sue, Gordevičius, Juozas, Milčiūtė, Milda, Brooke, Robert T., Connelly, Jessica J., Perkeybile, Allison M.

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Methylated Cytochrome P450 and the Solute Carrier Family of Genes Correlate With Perturbations in Bile Acid Metabolism in Parkinson's Disease von Vishweswaraiah, Sangeetha, Akyol, Sumeyya, Yilmaz, Ali, Ugur, Zafer, Gordevičius, Juozas, Oh, Kyung Joon, Brundin, Patrik, Radhakrishna, Uppala, Labrie, Viviane, Graham, Stewart F

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Father's care uniquely influences male neurodevelopment von Danoff, Joshua S, Ramos, Erin N, Hinton, Taylor D, Perkeybile, Allison M, Graves, Andrew J, Quinn, Graham C, Lightbody-Cimer, Aaron R, Gordevičius, Juozas, Milčiūtė, Milda, Brooke, Robert T, Carter, C Sue, Bales, Karen L, Erisir, Alev, Connelly, Jessica J

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Multiomics Analysis of Neuroblastoma Cells Reveals a Diversity of Malignant Transformations von Narmontė, Milda, Gibas, Povilas, Daniūnaitė, Kristina, Gordevičius, Juozas, Kriukienė, Edita

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Selective Breeding for High Intrinsic Exercise Capacity Slows Pan-Tissue Epigenetic Aging in Rats von Rossiter, Harry, Abbasi, Asghar, Gordevicius, Juozas, Brooke, Robert, Zoller, Joseph, Koch, Lauren, Britton, Steven, Horvath, Steve

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Epigenomic analysis of Parkinson’s disease neurons identifies Tet2 loss as neuroprotective von Marshall, Lee L., Killinger, Bryan A., Ensink, Elizabeth, Li, Peipei, Li, Katie X., Cui, Wei, Lubben, Noah, Weiland, Matthew, Wang, Xinhe, Gordevicius, Juozas, Coetzee, Gerhard A., Ma, Jiyan, Jovinge, Stefan, Labrie, Viviane

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Artificial Intelligence and Circulating Cell-Free DNA Methylation Profiling: Mechanism and Detection of Alzheimer's Disease von Bahado-Singh, Ray O, Radhakrishna, Uppala, Gordevičius, Juozas, Aydas, Buket, Yilmaz, Ali, Jafar, Faryal, Imam, Khaled, Maddens, Michael, Challapalli, Kshetra, Metpally, Raghu P, Berrettini, Wade H, Crist, Richard C, Graham, Stewart F, Vishweswaraiah, Sangeetha

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