TumorMap: Exploring the Molecular Similarities of Cancer Samples in an Interactive Portal von Newton, Yulia, Novak, Adam M, Swatloski, Teresa, McColl, Duncan C, Chopra, Sahil, Graim, Kiley, Weinstein, Alana S, Baertsch, Robert, Salama, Sofie R, Ellrott, Kyle, Chopra, Manu, Goldstein, Theodore C, Haussler, David, Morozova, Olena, Stuart, Joshua M

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Genomic Hallmarks and Structural Variation in Metastatic Prostate Cancer von Quigley, David A., Dang, Ha X., Zhao, Shuang G., Lloyd, Paul, Aggarwal, Rahul, Alumkal, Joshi J., Foye, Adam, Kothari, Vishal, Perry, Marc D., Bailey, Adina M., Playdle, Denise, Barnard, Travis J., Zhang, Li, Zhang, Jin, Youngren, Jack F., Cieslik, Marcin P., Parolia, Abhijit, Beer, Tomasz M., Thomas, George, Chi, Kim N., Gleave, Martin, Lack, Nathan A., Zoubeidi, Amina, Reiter, Robert E., Rettig, Matthew B., Witte, Owen, Ryan, Charles J., Fong, Lawrence, Kim, Won, Friedlander, Terence, Chou, Jonathan, Li, Haolong, Das, Rajdeep, Li, Hui, Moussavi-Baygi, Ruhollah, Goodarzi, Hani, Gilbert, Luke A., Lara, Primo N., Evans, Christopher P., Goldstein, Theodore C., Stuart, Joshua M., Tomlins, Scott A., Spratt, Daniel E., Cheetham, R. Keira, Cheng, Donavan T., Farh, Kyle, Gehring, Julian S., Hakenberg, Jörg, Liao, Arnold, Febbo, Philip G., Shon, John, Sickler, Brad, Batzoglou, Serafim, Knudsen, Karen E., He, Housheng H., Huang, Jiaoti, Wyatt, Alexander W., Dehm, Scott M., Ashworth, Alan, Chinnaiyan, Arul M., Maher, Christopher A., Small, Eric J., Feng, Felix Y.

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Whole-genome analysis informs breast cancer response to aromatase inhibition von Ellis, Matthew J., Ding, Li, Shen, Dong, Luo, Jingqin, Suman, Vera J., Wallis, John W., Van Tine, Brian A., Hoog, Jeremy, Goiffon, Reece J., Goldstein, Theodore C., Ng, Sam, Lin, Li, Crowder, Robert, Snider, Jacqueline, Ballman, Karla, Weber, Jason, Chen, Ken, Koboldt, Daniel C., Kandoth, Cyriac, Schierding, William S., McMichael, Joshua F., Miller, Christopher A., Lu, Charles, Harris, Christopher C., McLellan, Michael D., Wendl, Michael C., DeSchryver, Katherine, Allred, D. Craig, Esserman, Laura, Unzeitig, Gary, Margenthaler, Julie, Babiera, G. V., Marcom, P. Kelly, Guenther, J. M., Leitch, Marilyn, Hunt, Kelly, Olson, John, Tao, Yu, Maher, Christopher A., Fulton, Lucinda L., Fulton, Robert S., Harrison, Michelle, Oberkfell, Ben, Du, Feiyu, Demeter, Ryan, Vickery, Tammi L., Elhammali, Adnan, Piwnica-Worms, Helen, McDonald, Sandra, Watson, Mark, Dooling, David J., Ota, David, Chang, Li-Wei, Bose, Ron, Ley, Timothy J., Piwnica-Worms, David, Stuart, Joshua M., Wilson, Richard K., Mardis, Elaine R.

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Subtype and pathway specific responses to anticancer compounds in breast cancer von Heiser, Laura M, Sadanandam, Anguraj, Kuo, Wen-Lin, Benz, Stephen C, Goldstein, Theodore C, Ng, Sam, Gibb, William J, Wang, Nicholas J, Ziyad, Safiyyah, Tong, Frances, Bayani, Nora, Hu, Zhi, Billig, Jessica I, Dueregger, Andrea, Lewis, Sophia, Jakkula, Lakshmi, Korkola, James E, Durinck, Steffen, Pepin, François, Guan, Yinghui, Purdom, Elizabeth, Neuvial, Pierre, Bengtsson, Henrik, Wood, Kenneth W, Smith, Peter G, Vassilev, Lyubomir T, Hennessy, Bryan T, Greshock, Joel, Bachman, Kurtis E, Hardwicke, Mary Ann, Park, John W, Marton, Laurence J, Wolf, Denise M, Collisson, Eric A, Neve, Richard M, Mills, Gordon B, Speed, Terence P, Feiler, Heidi S, Wooster, Richard F, Haussler, David, Stuart, Joshua M, Gray, Joe W, Spellman, Paul T

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Genomic Hallmarks and Structural Variation in Metastatic Prostate Cancer von Quigley, David A., Dang, Ha X., Zhao, Shuang G., Lloyd, Paul, Aggarwal, Rahul, Alumkal, Joshi J., Foye, Adam, Kothari, Vishal, Perry, Marc D., Bailey, Adina M., Playdle, Denise, Barnard, Travis J., Zhang, Li, Zhang, Jin, Youngren, Jack F., Cieslik, Marcin P., Parolia, Abhijit, Beer, Tomasz M., Thomas, George, Chi, Kim N., Gleave, Martin, Lack, Nathan A., Zoubeidi, Amina, Reiter, Robert E., Rettig, Matthew B., Witte, Owen, Ryan, Charles J., Fong, Lawrence, Kim, Won, Friedlander, Terence, Chou, Jonathan, Li, Haolong, Das, Rajdeep, Li, Hui, Moussavi-Baygi, Ruhollah, Goodarzi, Hani, Gilbert, Luke A., Lara, Primo N., Evans, Christopher P., Goldstein, Theodore C., Stuart, Joshua M., Tomlins, Scott A., Spratt, Daniel E., Cheetham, R. Keira, Cheng, Donavan T., Farh, Kyle, Gehring, Julian S., Hakenberg, Jörg, Liao, Arnold, Febbo, Philip G., Shon, John, Sickler, Brad, Batzoglou, Serafim, Knudsen, Karen E., He, Housheng H., Huang, Jiaoti, Wyatt, Alexander W., Dehm, Scott M., Ashworth, Alan, Chinnaiyan, Arul M., Maher, Christopher A., Small, Eric J., Feng, Felix Y.

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PatientExploreR: an extensible application for dynamic visualization of patient clinical history from electronic health records in the OMOP common data model von Glicksberg, Benjamin S, Oskotsky, Boris, Thangaraj, Phyllis M, Giangreco, Nicholas, Badgeley, Marcus A, Johnson, Kipp W, Datta, Debajyoti, Rudrapatna, Vivek A, Rappoport, Nadav, Shervey, Mark M, Miotto, Riccardo, Goldstein, Theodore C, Rutenberg, Eugenia, Frazier, Remi, Lee, Nelson, Israni, Sharat, Larsen, Rick, Percha, Bethany, Li, Li, Dudley, Joel T, Tatonetti, Nicholas P, Butte, Atul J

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Molecular pathways: extracting medical knowledge from high-throughput genomic data von Goldstein, Theodore C, Paull, Evan O, Ellis, Matthew J, Stuart, Joshua M

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Comparative genomic analysis for pediatric cancer patients evaluated in a California Initiative to Advance Precision Medicine Demonstration Project von Morozova, Olena, Salama, Sofie R., Bjork, Isabel, Goldstein, Theodore C., Mueller, Sabine, Sender, Leonard S., Sweet-Cordero, Alejandro, Haussler, David

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Comparative Tumor RNA Sequencing Analysis for Difficult-to-Treat Pediatric and Young Adult Patients With Cancer von Vaske, Olena M., Bjork, Isabel, Salama, Sofie R., Beale, Holly, Tayi Shah, Avanthi, Sanders, Lauren, Pfeil, Jacob, Lam, Du L., Learned, Katrina, Durbin, Ann, Kephart, Ellen T., Currie, Rob, Newton, Yulia, Swatloski, Teresa, McColl, Duncan, Vivian, John, Zhu, Jingchun, Lee, Alex G., Leung, Stanley G., Spillinger, Aviv, Liu, Heng-Yi, Liang, Winnie S., Byron, Sara A., Berens, Michael E., Resnick, Adam C., Lacayo, Norman, Spunt, Sheri L., Rangaswami, Arun, Huynh, Van, Torno, Lilibeth, Plant, Ashley, Kirov, Ivan, Zabokrtsky, Keri B., Rassekh, S. Rod, Deyell, Rebecca J., Laskin, Janessa, Marra, Marco A., Sender, Leonard S., Mueller, Sabine, Sweet-Cordero, E. Alejandro, Goldstein, Theodore C., Haussler, David

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PDX-MI: Minimal Information for Patient-Derived Tumor Xenograft Models von Meehan, Terrence F, Conte, Nathalie, Goldstein, Theodore, Inghirami, Giorgio, Murakami, Mark A, Brabetz, Sebastian, Gu, Zhiping, Wiser, Jeffrey A, Dunn, Patrick, Begley, Dale A, Krupke, Debra M, Bertotti, Andrea, Bruna, Alejandra, Brush, Matthew H, Byrne, Annette T, Caldas, Carlos, Christie, Amanda L, Clark, Dominic A, Dowst, Heidi, Dry, Jonathan R, Doroshow, James H, Duchamp, Olivier, Evrard, Yvonne A, Ferretti, Stephane, Frese, Kristopher K, Goodwin, Neal C, Greenawalt, Danielle, Haendel, Melissa A, Hermans, Els, Houghton, Peter J, Jonkers, Jos, Kemper, Kristel, Khor, Tin O, Lewis, Michael T, Lloyd, K C Kent, Mason, Jeremy, Medico, Enzo, Neuhauser, Steven B, Olson, James M, Peeper, Daniel S, Rueda, Oscar M, Seong, Je Kyung, Trusolino, Livio, Vinolo, Emilie, Wechsler-Reya, Robert J, Weinstock, David M, Welm, Alana, Weroha, S John, Amant, Frédéric, Pfister, Stefan M, Kool, Marcel, Parkinson, Helen, Butte, Atul J, Bult, Carol J

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Luminal and basal subtyping of metastatic castration-resistant prostate cancer (mCRPC) and its clinical implications von Kim, Won, Small, Eric Jay, Aggarwal, Rahul Raj, Den, Robert Benjamin, Lehrer, Jonathan, Zhang, Li, Youngren, Jack, Goldstein, Theodore C, Alumkal, Joshi J., Gleave, Martin, Rettig, Matthew, Evans, Christopher P., Beer, Tomasz M., Reiter, Robert Evan, Huang, Jiaoti, Thomas, George V., Davicioni, Elai, Ryan, Charles J., Spratt, Daniel Eidelberg, Feng, Felix Y

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Abstract 60: The MedBook network for cancer precision medical care von Goldstein, Theodore C., Baertsch, Robert, Febbo, Phillip G., Stuart, Josh, Haussler, David

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Identification of polo-like kinase 1 (PLK1) in aggressive prostate cancer by paradigm analysis von Febbo, Phillip G., Goldstein, Theodore C., Baertsch, Robert, Youngren, Jack, Newton, Yulia, Bivol, Adrian, Small, Eric Jay, Stuart, Joshua M.

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Clinical and genomic characterization of metastatic small cell/neuroendocrine prostate cancer (SCNC) and intermediate atypical prostate cancer (IAC): Results from the SU2C/PCF/AACR... von Small, Eric Jay, Aggarwal, Rahul Raj, Huang, Jiaoti, Sokolov, Artem, Zhang, Li, Alumkal, Joshi J., Youngren, Jack, Ryan, Charles J., Foye, Adam, Reiter, Robert Evan, Evans, Christopher P., Gleave, Martin, Witte, Owen, Stuart, Josh, Goldstein, Theodore C., Thomas, George V., True, Lawrence D., Beltran, Himisha, Rubin, Mark A., Beer, Tomasz M.

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Persistence of AR signaling in small cell neuroendocrine prostate cancer (SCNC) and intermediate atypical carcinoma (IAC): Results from the SU2C/PCF/AACR West Coast Prostate Cancer... von Aggarwal, Rahul Raj, Youngren, Jack, Sokolov, Artem, Huang, Jiaoti, Thomas, George V., True, Lawrence D., Foye, Adam, Alumkal, Joshi J., Ryan, Charles J., Beer, Tomasz M., Evans, Christopher P., Gleave, Martin, Rettig, Matthew, Stuart, Joshua M., Lara, Primo, Goldstein, Theodore C., Zhang, Li, Reiter, Robert Evan, Chi, Kim N., Small, Eric Jay

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Pathway-based signature analysis of RNA-seq data to reveal new targetable avenues for metastatic castration-resistant prostate cancer (mCRPC) patients (pts): Preliminary results fr... von Bivol, Adrian, Baertsch, Robert, Sokolov, Artem, Paull, Evan, Newton, Yulia, Goldstein, Theodore C., Foye, Adam, Pourmand, Nader, Youngren, Jack, Parulkar, Rahul, Lopez, Asis, de Vere White, Ralph, Alumkal, Joshi J., Toschi, Alexandria, Beer, Tomasz M., Evans, Christopher P., Gleave, Martin Edwin, Witte, Owen, Small, Eric Jay, Stuart, Joshua M.

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Molecular profiling of metastatic castration-resistant prostate cancer (mCRPC): Preliminary results from the SU2C/PCF/AACR West Coast Prostate Cancer Dream Team (WCDT) von Thomas, George, Youngren, Jack, Ryan, Charles J., Beer, Tomasz M., Gleave, Martin Edwin, Evans, Christopher P., Stuart, Josh, Rettig, Matthew, Toschi, Alexandria, Foye, Adam, Alumkal, Joshi J., Corless, Christopher L., Neff, Tanaya, Baertsch, Robert, Huang, Jiaoti, Chi, Kim N., Lam, Kit S., Goldstein, Theodore C., Witte, Owen, Small, Eric Jay

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Whole genome sequencing to characterize luminal-type breast cancer von Ellis, Matthew James, Ding, Li, Shen, Dong, Luo, Jingqin, Suman, Vera J., Goiffon, Reece J., Wallis, John W., Goldstein, Theodore C., Chen, Ken, Allred, Donald Craig, Leitch, A. Marilyn, Olson, John A., Ota, David M., Watson, Mark, Piwnica-Worms, David, Bose, Ron, Stuart, Joshua M., Wilson, Richard K., Hunt, Kelly, Mardis, Elaine

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EXECUTION DIFFERENCE IDENTIFICATION TOOL von DRUKMAN MAXWELL O, LEWALLEN STEPHEN R, GOLDSTEIN THEODORE C

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Simultaneous viewing of multiple tool execution results von Lewallen, Stephen R, Goldstein, Theodore C, Drukman, Maxwell O

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