Ligand-Induced Protein Responses and Mechanical Signal Propagation Described by Linear Response Theories von Yang, Lee-Wei, Kitao, Akio, Huang, Bang-Chieh, Gō, Nobuhiro

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Snake cube puzzle and protein folding von Go, Nobuhiro

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Detection of pockets on protein surfaces using small and large probe spheres to find putative ligand binding sites von Kawabata, Takeshi, Go, Nobuhiro

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The effects of solvent on the conformation and the collective motions of protein: Normal mode analysis and molecular dynamics simulations of melittin in water and in vacuum von Kitao, Akio, Hirata, Fumio, Gō, Nobuhiro

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Amino acid residue doublet propensity in the protein-RNA interface and its application to RNA interface prediction von Kim, Oanh T.P, Yura, Kei, Go, Nobuhiro

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Harmonicity and anharmonicity in protein dynamics: A normal mode analysis and principal component analysis von Hayward, Steven, Kitao, Akio, Gō, Nobuhiro

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Normal mode refinement: Crystallographic refinement of protein dynamic structure: I. Theory and test by simulated diffraction data von Kidera, Akinori, Gō, Nobuhiro

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Effect of Solvent on Collective Motions in Globular Protein von Hayward, S., Kitao, Akio, Hirata, Fumio, Gō, Nobuhiro

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Harmonic and anharmonic aspects in the dynamics of BPTI: A normal mode analysis and principal component analysis von Hayward, Steven, Kitao, Akio, Gō, Nobuhiro

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Energy landscape of a native protein: Jumping-among-minima model von Kitao, Akio, Hayward, Steven, Go, Nobuhiro

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Common spatial arrangements of backbone fragments in homologous and non-homologous proteins von Alexandrov, Nickolai N., Takahashi, Katsutoshi, Gō, Nobuhiro

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Switch Interactions Control Energy Frustration and Multiple Flagellar Filament Structures von Kitao, Akio, Yonekura, Koji, Maki-Yonekura, Saori, Samatey, Fadel A., Imada, Katsumi, Namba, Keiichi, Go, Nobuhiro

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BAAQ: An Infrastructure for Application Integration and Knowledge Discovery in Bioinformatics von Xiujun Gong, Nakamura, K., Hua Yu, Kei Yura, Nobuhiro Go

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Novel types of two-domain multi-copper oxidases: possible missing links in the evolution von Nakamura, Kensuke, Kawabata, Takeshi, Yura, Kei, Go, Nobuhiro

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Collective variable description of native protein dynamics von Hayward, S, Go, N

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Projection of monte carlo and molecular dynamics trajectories onto the normal mode axes: Human lysozyme von Horiuchi, Tokio, Gō, Nobuhiro

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High-speed classification of coherent X-ray diffraction patterns on the K computer for high-resolution single biomolecule imaging von Tokuhisa, Atsushi, Arai, Junya, Joti, Yasumasa, Ohno, Yoshiyuki, Kameyama, Toyohisa, Yamamoto, Keiji, Hatanaka, Masayuki, Gerofi, Balazs, Shimada, Akio, Kurokawa, Motoyoshi, Shoji, Fumiyoshi, Okada, Kensuke, Sugimoto, Takashi, Yamaga, Mitsuhiro, Tanaka, Ryotaro, Yokokawa, Mitsuo, Hori, Atsushi, Ishikawa, Yutaka, Hatsui, Takaki, Go, Nobuhiro

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Enhanced resolution of molecular recognition to distinguish structurally similar molecules by different conformational responses of a protein upon ligand binding von Higuchi, Mariko, Fujii, Jumpei, Yonetani, Yoshiteru, Kitao, Akio, Go, Nobuhiro

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Biological meaning, statistical significance, and classification of local spatial similarities in nonhomologous proteins von Alexandrov, Nickolai N., Gō, Nobuhiro

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Protein Boson Peak Originated from Hydration-Related Multiple Minima Energy Landscape von Joti, Yasumasa, Kitao, Akio, Go, Nobuhiro

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