Integrative clustering of multi-level 'omic data based on non-negative matrix factorization algorithm von Chalise, Prabhakar, Fridley, Brooke L

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Complement Component 3 (C3) Haplotypes and Risk of Advanced Age-Related Macular Degeneration von Park, Kyu Hyung, Fridley, Brooke L, Ryu, Euijung, Tosakulwong, Nirubol, Edwards, Albert O

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Comparison of normalization approaches for gene expression studies completed with high-throughput sequencing von Abbas-Aghababazadeh, Farnoosh, Li, Qian, Fridley, Brooke L

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The harsh microenvironment in early breast cancer selects for a Warburg phenotype von Damaghi, Mehdi, West, Jeffrey, Robertson-Tessi, Mark, Xu, Liping, Ferrall-Fairbanks, Meghan C., Stewart, Paul A., Persi, Erez, Fridley, Brooke L., Altrock, Philipp M., Gatenby, Robert A., Sims, Peter A., Anderson, Alexander R. A., Gillies, Robert J.

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FKBP51 Affects Cancer Cell Response to Chemotherapy by Negatively Regulating Akt von Pei, Huadong, Li, Liang, Fridley, Brooke L., Jenkins, Gregory D., Kalari, Krishna R., Lingle, Wilma, Petersen, Gloria, Lou, Zhenkun, Wang, Liewei

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PurBayes: estimating tumor cellularity and subclonality in next-generation sequencing data von Larson, Nicholas B, Fridley, Brooke L

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Gene set analysis of SNP data: benefits, challenges, and future directions von FRIDLEY, Brooke L, BIERNACKA, Joanna M

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Association between endometriosis and risk of histological subtypes of ovarian cancer: a pooled analysis of case–control studies von Pearce, Celeste Leigh, Dr, Templeman, Claire, MD, Rossing, Mary Anne, Prof, Lee, Alice, MPH, Near, Aimee M, MPH, Webb, Penelope M, PhD, Nagle, Christina M, PhD, Doherty, Jennifer A, PhD, Cushing-Haugen, Kara L, MS, Wicklund, Kristine G, PhD, Chang-Claude, Jenny, Prof, Hein, Rebecca, PhD, Lurie, Galina, PhD, Wilkens, Lynne R, DrPH, Carney, Michael E, MD, Goodman, Marc T, Prof, Moysich, Kirsten, Prof, Kjaer, Susanne K, Prof, Hogdall, Estrid, PhD, Jensen, Allan, PhD, Goode, Ellen L, PhD, Fridley, Brooke L, PhD, Larson, Melissa C, MS, Schildkraut, Joellen M, Prof, Palmieri, Rachel T, MSPH, Cramer, Daniel W, Prof, Terry, Kathryn L, ScD, Vitonis, Allison F, SM, Titus, Linda J, Prof, Ziogas, Argyrios, PhD, Brewster, Wendy, PhD, Anton-Culver, Hoda, Prof, Gentry-Maharaj, Alexandra, PhD, Ramus, Susan J, PhD, Anderson, A Rebecca, BS, Brueggmann, Doerthe, MD, Fasching, Peter A, MD, Gayther, Simon A, Prof, Huntsman, David G, Prof, Menon, Usha, Prof, Ness, Roberta B, Prof, Pike, Malcolm C, Prof, Risch, Harvey, Prof, Wu, Anna H, Prof, Berchuck, Andrew, Prof

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Differential roles of ERRFI1 in EGFR and AKT pathway regulation affect cancer proliferation von Cairns, Junmei, Fridley, Brooke L, Jenkins, Gregory D, Zhuang, Yongxian, Yu, Jia, Wang, Liewei

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Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models von Ospina, Oscar E., Soupir, Alex C., Manjarres-Betancur, Roberto, Gonzalez-Calderon, Guillermo, Yu, Xiaoqing, Fridley, Brooke L.

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PARP1 and POLD2 as prognostic biomarkers for multiple myeloma in autologous stem cell transplant von Thomas, Melissa, Li, Junan, King, Kevan, Persaud, Avinash K, Duah, Ernest, Vangundy, Zachary, Hofmeister, Craig C, Lamba, Jatinder K, Tan, Aik Choon, Fridley, Brooke L, Poi, Ming J, Seligson, Nathan D

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Tumor immune cell clustering and its association with survival in African American women with ovarian cancer von Wilson, Christopher, Soupir, Alex C, Thapa, Ram, Creed, Jordan, Nguyen, Jonathan, Segura, Carlos Moran, Gerke, Travis, Schildkraut, Joellen M, Peres, Lauren C, Fridley, Brooke L

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Gender Bias in Human Systemic Lupus Erythematosus: A Problem of Steroid Receptor Action? von Rider, Virginia, Abdou, Nabih I, Kimler, Bruce F, Lu, Nanyan, Brown, Susan, Fridley, Brooke L

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Prognostic features of endometrial cancer metastasis to the central nervous system von Kuznicki, Michelle L, Mallen, Adrianne, Ha, Kristal, McClung, Emily Clair, Castaneda, Antonio V, Cao, Biwei, Fridley, Brooke L, Chon, Hye Sook, Chern, Jing Yi, Hoffman, Mitchel, Wenham, Robert M, Matsuo, Koji, Shahzad, Mian M. K

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A Question-and-Answer System to Extract Data From Free-Text Oncological Pathology Reports (CancerBERT Network): Development Study von Mitchell, Joseph Ross, Szepietowski, Phillip, Howard, Rachel, Reisman, Phillip, Jones, Jennie D, Lewis, Patricia, Fridley, Brooke L, Rollison, Dana E

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Radiation pharmacogenomics: a genome-wide association approach to identify radiation response biomarkers using human lymphoblastoid cell lines von Niu, Nifang, Qin, Yuxin, Fridley, Brooke L, Hou, Junmei, Kalari, Krishna R, Zhu, Minjia, Wu, Tse-Yu, Jenkins, Gregory D, Batzler, Anthony, Wang, Liewei

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Modeling phenotypic heterogeneity towards evolutionarily inspired osteosarcoma therapy von Welch, Darcy L., Fridley, Brooke L., Cen, Ling, Teer, Jamie K., Yoder, Sean J., Pettersson, Fredrik, Xu, Liping, Cheng, Chia-Ho, Zhang, Yonghong, Alexandrow, Mark G., Xiang, Shengyan, Robertson-Tessi, Mark, Brown, Joel S., Metts, Jonathan, Brohl, Andrew S., Reed, Damon R.

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Molecular classification of high grade endometrioid and clear cell ovarian cancer using TCGA gene expression signatures von Winterhoff, Boris, Hamidi, Habib, Wang, Chen, Kalli, Kimberly R, Fridley, Brooke L, Dering, Judy, Chen, Hsiao-Wang, Cliby, William A, Wang, He-Jing, Dowdy, Sean, Gostout, Bobbie S, Keeney, Gary L, Goode, Ellen L, Konecny, Gottfried E

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Gemcitabine and arabinosylcytosin pharmacogenomics: genome-wide association and drug response biomarkers von Li, Liang, Fridley, Brooke L, Kalari, Krishna, Jenkins, Gregory, Batzler, Anthony, Weinshilboum, Richard M, Wang, Liewei

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Genome-wide Analysis of Common Copy Number Variation and Epithelial Ovarian Cancer Risk von Reid, Brett M, Permuth, Jennifer B, Chen, Y Ann, Fridley, Brooke L, Iversen, Edwin S, Chen, Zhihua, Jim, Heather, Vierkant, Robert A, Cunningham, Julie M, Barnholtz-Sloan, Jill S, Narod, Steven, Risch, Harvey, Schildkraut, Joellen M, Goode, Ellen L, Monteiro, Alvaro N, Sellers, Thomas A

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