High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates von Dugar, Gaurav, Herbig, Alexander, Förstner, Konrad U, Heidrich, Nadja, Reinhardt, Richard, Nieselt, Kay, Sharma, Cynthia M

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Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions von Westermann, Alexander J., Förstner, Konrad U., Amman, Fabian, Barquist, Lars, Chao, Yanjie, Schulte, Leon N., Müller, Lydia, Reinhardt, Richard, Stadler, Peter F., Vogel, Jörg

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Induced Pluripotent Stem Cell-Derived Brain Endothelial Cells as a Cellular Model to Study Neisseria meningitidis Infection von Martins Gomes, Sara F, Westermann, Alexander J, Sauerwein, Till, Hertlein, Tobias, Förstner, Konrad U, Ohlsen, Knut, Metzger, Marco, Shusta, Eric V, Kim, Brandon J, Appelt-Menzel, Antje, Schubert-Unkmeir, Alexandra

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APRICOT: an integrated computational pipeline for the sequence-based identification and characterization of RNA-binding proteins von Sharan, Malvika, Förstner, Konrad U, Eulalio, Ana, Vogel, Jörg

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Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene... von Čuklina, Jelena, Hahn, Julia, Imakaev, Maxim, Omasits, Ulrich, Förstner, Konrad U, Ljubimov, Nikolay, Goebel, Melanie, Pessi, Gabriella, Fischer, Hans-Martin, Ahrens, Christian H, Gelfand, Mikhail S, Evguenieva-Hackenberg, Elena

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Integrative "omics"-approach discovers dynamic and regulatory features of bacterial stress responses von Berghoff, Bork A, Konzer, Anne, Mank, Nils N, Looso, Mario, Rische, Tom, Förstner, Konrad U, Krüger, Marcus, Klug, Gabriele

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Ten simple rules for organizing an unconference von Budd, Aidan, Dinkel, Holger, Corpas, Manuel, Fuller, Jonathan C, Rubinat, Laura, Devos, Damien P, Khoueiry, Pierre H, Förstner, Konrad U, Georgatos, Fotis, Rowland, Francis, Sharan, Malvika, Binder, Janos X, Grace, Tom, Traphagen, Karyn, Gristwood, Adam, Wood, Natasha T

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Identification of BvgA-Dependent and BvgA-Independent Small RNAs (sRNAs) in Bordetella pertussis Using the Prokaryotic sRNA Prediction Toolkit ANNOgesic von Moon, Kyung, Sim, Minji, Tai, Chin-Hsien, Yoo, Kyungyoon, Merzbacher, Charlotte, Yu, Sung-Huan, Kim, David D, Lee, Jaehyun, Förstner, Konrad U, Chen, Qing, Stibitz, Scott, Knipling, Leslie G, Hinton, Deborah M

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Tetrachloroethene respiration in Sulfurospirillum species is regulated by a two‐component system as unraveled by comparative genomics, transcriptomics, and regulator binding studie... von Esken, Jens, Goris, Tobias, Gadkari, Jennifer, Bischler, Thorsten, Förstner, Konrad U., Sharma, Cynthia M., Diekert, Gabriele, Schubert, Torsten

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Evolution of Resistance to a Last-Resort Antibiotic in Staphylococcus aureus via Bacterial Competition von Koch, Gudrun, Yepes, Ana, Förstner, Konrad U., Wermser, Charlotte, Stengel, Stephanie T., Modamio, Jennifer, Ohlsen, Knut, Foster, Kevin R., Lopez, Daniel

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Grad-seq guides the discovery of ProQ as a major small RNA-binding protein von Smirnov, Alexandre, Förstner, Konrad U., Holmqvist, Erik, Otto, Andreas, Günster, Regina, Becher, Dörte, Reinhardt, Richard, Vogel, Jörg

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Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli von Thomason, Maureen K, Bischler, Thorsten, Eisenbart, Sara K, Förstner, Konrad U, Zhang, Aixia, Herbig, Alexander, Nieselt, Kay, Sharma, Cynthia M, Storz, Gisela

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In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways von Chao, Yanjie, Li, Lei, Girodat, Dylan, Förstner, Konrad U., Said, Nelly, Corcoran, Colin, Śmiga, Michał, Papenfort, Kai, Reinhardt, Richard, Wieden, Hans-Joachim, Luisi, Ben F., Vogel, Jörg

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Binding and Mobilization of Heavy Metals in Contaminated Sediments Affected by pH and Redox Potential von Calmano, W., Hong, J., Förstner, U.

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READemption-a tool for the computational analysis of deep-sequencing-based transcriptome data von Förstner, Konrad U, Vogel, Jörg, Sharma, Cynthia M

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Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation von Papenfort, Kai, Förstner, Konrad U, Cong, Jian-Ping, Sharma, Cynthia M, Bassler, Bonnie L

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Development of Similarity Measures From Graph-Structured Bibliographic Metadata: An Application to Identify Scientific Convergence von Melnychuk, Tetyana, Galke, Lukas, Seidlmayer, Eva, Broring, Stefanie, Forstner, Konrad U., Tochtermann, Klaus, Schultz, Carsten

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Ten simple rules for implementing electronic lab notebooks (ELNs) von Vandendorpe, Justine, Adam, Beatrix, Wilbrandt, Jeanne, Lindstädt, Birte, Förstner, Konrad U

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Traceability of sediment analysis von Förstner, U

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Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection von Maudet, Claire, Mano, Miguel, Sunkavalli, Ushasree, Sharan, Malvika, Giacca, Mauro, Förstner, Konrad U., Eulalio, Ana

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