The gut microbiome is associated with behavioural task in honey bees von Jones, J. C., Fruciano, C., Marchant, J., Hildebrand, F., Forslund, S., Bork, P., Engel, P., Hughes, W. O. H.

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Commentary on a combined approach to the problem of developing biomarkers for the prediction of spontaneous preterm labor that leads to preterm birth von Lamont, R.F., Richardson, L.S., Boniface, J.J., Cobo, T., Exner, M.M., Christensen, I.B., Forslund, S.K., Gaba, A., Helmer, H., Jørgensen, J.S., Khan, R.N., McElrath, T.F., Petro, K., Rasmussen, M., Singh, R., Tribe, R.M., Vink, J.S., Vinter, C.A., Zhong, N., Menon, R.

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Structure and function of the global topsoil microbiome von Bahram, Mohammad, Hildebrand, Falk, Forslund, Sofia K., Anderson, Jennifer L., Soudzilovskaia, Nadejda A., Bodegom, Peter M., Bengtsson-Palme, Johan, Anslan, Sten, Coelho, Luis Pedro, Harend, Helery, Huerta-Cepas, Jaime, Medema, Marnix H., Maltz, Mia R., Mundra, Sunil, Olsson, Pål Axel, Pent, Mari, Põlme, Sergei, Sunagawa, Shinichi, Ryberg, Martin, Tedersoo, Leho, Bork, Peer

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PhaBOX: a web server for identifying and characterizing phage contigs in metagenomic data von Shang, Jiayu, Peng, Cheng, Liao, Herui, Tang, Xubo, Sun, Yanni

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Concatenator, a user-friendly program to concatenate DNA sequences, implementing graphical user interfaces for MAFFT and FastTree von Vences, Miguel, Patmanidis, Stefanos, Kharchev, Vladimir, Renner, Susanne S

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TrajPy: empowering feature engineering for trajectory analysis across domains von Moreira-Soares, Maurício, Mossmann, Eduardo, Travasso, Rui D M, Bordin, José Rafael

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Towards monitoring of antimicrobial resistance in the environment: For what reasons, how to implement it, and what are the data needs? von Bengtsson-Palme, Johan, Abramova, Anna, Berendonk, Thomas U., Coelho, Luis Pedro, Forslund, Sofia K., Gschwind, Rémi, Heikinheimo, Annamari, Jarquín-Díaz, Víctor Hugo, Khan, Ayaz Ali, Klümper, Uli, Löber, Ulrike, Nekoro, Marmar, Osińska, Adriana D., Ugarcina Perovic, Svetlana, Pitkänen, Tarja, Rødland, Ernst Kristian, Ruppé, Etienne, Wasteson, Yngvild, Wester, Astrid Louise, Zahra, Rabaab

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Microbial Abundances Retrieved from Sequencing data-automated NCBI Taxonomy (MARS): a pipeline to create relative microbial abundance data for the Microbiome Modelling Toolbox and... von Hulshof, Tim, Nap, Bram, Martinelli, Filippo, Thiele, Ines

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PM-CNN: microbiome status recognition and disease detection model based on phylogeny and multi-path neural network von Wang, Qiangqiang, Fan, Xiaoqian, Wu, Shunyao, Su, Xiaoquan

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MerCat2: a versatile k -mer counter and diversity estimator for database-independent property analysis obtained from omics data von Figueroa, 3rd, Jose L, Redinbo, Andrew, Panyala, Ajay, Colby, Sean, Friesen, Maren L, Tiemann, Lisa, White, 3rd, Richard Allen

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DynProfiler: a Python package for comprehensive analysis and interpretation of signaling dynamics leveraged by deep learning techniques von Tsutsui, Masato, Okada, Mariko

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Predicting evolutionary targets and parameters of gene deletion from expression data von Campelo Dos Santos, Andre Luiz, DeGiorgio, Michael, Assis, Raquel

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MetaQuad: shared informative variants discovery in metagenomic samples von Xu, Sheng, Morgan, Daniel C, Qian, Gordon, Huang, Yuanhua, Ho, Joshua W K

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Chronogram: an R package for data curation and analysis of infection and vaccination cohort studies von Greenwood, David, Shawe-Taylor, Marianne, Townsley, Hermaleigh, Gahir, Joshua, Sahadeo, Nikita, Alhassan, Yakubu, Chaloner, Charlotte, Galgut, Oliver, Kelly, Gavin, Bauer, David L V, Wall, Emma C, Wu, Mary Y, Carr, Edward J

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HiTaxon: a hierarchical ensemble framework for taxonomic classification of short reads von Verma, Bhavish, Parkinson, John

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OMEinfo: global geographic metadata for -omics experiments von Crown, Matthew, Bashton, Matthew

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BioNAR: an integrated biological network analysis package in bioconductor von McLean, Colin, Sorokin, Anatoly, Simpson, Thomas Ian, Armstrong, James Douglas, Sorokina, Oksana

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ProbioMinServer: an integrated platform for assessing the safety and functional properties of potential probiotic strains von Liu, Yen-Yi, Hsu, Chu-Yi, Yang, Ya-Chu, Huang, Chien-Hsun, Chen, Chih-Chieh

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TaxaHFE: a machine learning approach to collapse microbiome datasets using taxonomic structure von Oliver, Andrew, Kay, Matthew, Lemay, Danielle G

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Benchmarking of microbiome detection tools on RNA-seq synthetic databases according to diverse conditions von Jurado-Rueda, Francisco, Alonso-Guirado, Lola, Perea-Chamblee, Tomin E, Elliott, Oliver T, Filip, Ioan, Rabadán, Raúl, Malats, Núria

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