Distinguishable Epidemics of Multidrug-Resistant Salmonella Typhimurium DT104 in Different Hosts von Mather, A. E., Reid, S. W. J., Maskell, D. J., Parkhill, J., Fookes, M. C., Harris, S. R., Brown, D. J., Coia, J. E., Mulvey, M. R., Gilmour, M. W., Petrovska, L., de Pinna, E., Kuroda, M., Akiba, M., Izumiya, H., Connor, T. R., Suchard, M. A., Lemey, P., Mellor, D. J., Haydon, D. T., Thomson, N. R.

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A simple method for directional transcriptome sequencing using Illumina technology von Croucher, Nicholas J., Fookes, Maria C., Perkins, Timothy T., Turner, Daniel J., Marguerat, Samuel B., Keane, Thomas, Quail, Michael A., He, Miao, Assefa, Sammey, Bähler, Jürg, Kingsley, Robert A., Parkhill, Julian, Bentley, Stephen D., Dougan, Gordon, Thomson, Nicholas R.

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Dominant role of nucleotide substitution in the diversification of serotype 3 pneumococci over decades and during a single infection von Croucher, Nicholas J, Mitchell, Andrea M, Gould, Katherine A, Inverarity, Donald, Barquist, Lars, Feltwell, Theresa, Fookes, Maria C, Harris, Simon R, Dordel, Janina, Salter, Susannah J, Browall, Sarah, Zemlickova, Helena, Parkhill, Julian, Normark, Staffan, Henriques-Normark, Birgitta, Hinds, Jason, Mitchell, Tim J, Bentley, Stephen D

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A simple method for directional transcriptome sequencing using Illumina technology von Croucher, NJ, Fookes, MC, Perkins, TT, Turner, DJ, Marguerat, SB, Keane, T, Quail, MA, He, M, Assefa, S, Bähler, J, Kingsley, RA, Parkhill, J, Bentley, SD, Dougan, G, Thomson, NR

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A simple method for directional transcriptome sequencing using Illumina technology von Croucher, NJ, Fookes, MC, Perkins, TT, Turner, DJ, Marguerat, SB, Keane, T, Quail, MA, He, M, Assefa, S, Bahler, J, Kingsley, RA, Parkhill, J, Bentley, SD, Dougan, G, Thomson, NR

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RNA-seq analysis of the influence of anaerobiosis and FNR on Shigella flexneri von Vergara-Irigaray, Marta, Fookes, Maria C, Thomson, Nicholas R, Tang, Christoph M

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Structure, Diversity, and Mobility of the Salmonella Pathogenicity Island 7 Family of Integrative and Conjugative Elements within Enterobacteriaceae von Seth-Smith, Helena M. B, Fookes, Maria C, Okoro, Chinyere K, Baker, Stephen, Harris, Simon R, Scott, Paul, Pickard, Derek, Quail, Michael A, Churcher, Carol, Sanders, Mandy, Harmse, Johan, Dougan, Gordon, Parkhill, Julian, Thomson, Nicholas R

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The characterisation of secondary organic aerosol formed during the photodecomposition of 1,3-butadiene in air containing nitric oxide von Angove, D.E., Fookes, C.J.R., Hynes, R.G., Walters, C.K., Azzi, M.

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Patterns of genome evolution that have accompanied host adaptation in Salmonella von Langridge, Gemma C, Fookes, Maria, Connor, Thomas R, Feltwell, Theresa, Feasey, Nicholas, Parsons, Bryony N, Seth-Smith, Helena M B, Barquist, Lars, Stedman, Anna, Humphrey, Tom, Wigley, Paul, Peters, Sarah E, Maskell, Duncan J, Corander, Jukka, Chabalgoity, Jose A, Barrow, Paul, Parkhill, Julian, Dougan, Gordon, Thomson, Nicholas R

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Evaluation of Combined Artificial Intelligence and Radiologist Assessment to Interpret Screening Mammograms von Schaffter, Thomas, Buist, Diana S. M., Lee, Christoph, Nikulin, Yaroslav, Ribli, Dezso, Guan, Yuanfang, Lotter, William, Jie, Zequn, Du, Hao, Wang, Sijia, Feng, Jiashi, Feng, Mengling, Kim, Hyo-Eun, Albiol, Francisco, Albiol, Alberto, Morrell, Stephen, Wojna, Zbigniew, Ahsen, Mehmet Eren, Asif, Umar, Yepes, Antonio Jimeno, Yohanandan, Shivanthan, Rabinovici-Cohen, Simona, Yi, Darvin, Hoff, Bruce, Yu, Thomas, Neto, Elias Chaibub, Rubin, Daniel L., Lindholm, Peter, Margolies, Laurie R., McBride, Russell Bailey, Rothstein, Joseph H., Sieh, Weiva, Ben-Ari, Rami, Harrer, Stefan, Trister, Andrew, Friend, Stephen, Norman, Thea, Sahiner, Berkman, Strand, Fredrik, Guinney, Justin, Stolovitzky, Gustavo

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Parallel independent evolution of pathogenicity within the genus Yersinia von Reuter, Sandra, Connor, Thomas R., Barquist, Lars, Walker, Danielle, Feltwell, Theresa, Harris, Simon R., Fookes, Maria, Hall, Miquette E., Petty, Nicola K., Fuchs, Thilo M., Corander, Jukka, Dufour, Muriel, Ringwood, Tamara, Savin, Cyril, Bouchier, Christiane, Martin, Liliane, Miettinen, Minna, Shubin, Mikhail, Riehm, Julia M., Laukkanen-Ninios, Riikka, Sihvonen, Leila M., Siitonen, Anja, Skurnik, Mikael, Falcão, Juliana Pfrimer, Fukushima, Hiroshi, Scholz, Holger C., Prentice, Michael B., Wren, Brendan W., Parkhill, Julian, Carniel, Elisabeth, Achtman, Mark, McNally, Alan, Thomson, Nicholas R.

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Radiosynthesis, In Vivo Biological Evaluation, and Imaging of Brain Lesions with [123I]-CLINME, a New SPECT Tracer for the Translocator Protein von Gregoire, Marie-Claude, Dolle, F., Katsifis, A., Fookes, C. J. R., Berghofer, P., Jackson, T., Liu, X., Pham, T., Greguric, Ivan, Quinlivan, M., Mattner, F., Dikic, B.

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Composition, Acquisition, and Distribution of the Vi Exopolysaccharide-Encoding Salmonella enterica Pathogenicity Island SPI-7 von Pickard, Derek, Wain, John, Baker, Stephen, Line, Alexandra, Chohan, Sonia, Fookes, Maria, Barron, Andrew, Gaora, Peadar O, Chabalgoity, José A, Thanky, Niren, Scholes, Christoph, Thomson, Nicholas, Quail, Michael, Parkhill, Julian, Dougan, Gordon

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Identification of Core and Variable Components of the Salmonella enterica Subspecies I Genome by Microarray von Anjum, Muna F, Marooney, Chris, Fookes, Maria, Baker, Stephen, Dougan, Gordon, Ivens, Al, Woodward, Martin J

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RNA-seq analysis of the influence of anaerobiosis and FNR on Shigella flexneri von Vergara-Irigaray, Marta, Fookes, Maria C, Thomson, Nicholas R, Tang, Christoph M

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The type III secretion system effector SeoC of Salmonella enterica subspecies salamae and arizonae ADP-ribosylates Src and inhibits opsono-phagocytosis von Pollard, DJ, Young, JC, Covarelli, V, Herrera-León, S, Connor, TR, Fookes, M, Walker, D, Echeita, A, Thomson, NR, Berger, CN, Frankel, G

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Salmonella Typhi sense host neuroendocrine stress hormones and release the toxin haemolysin E von Karavolos, Michail H, Bulmer, David M, Spencer, Hannah, Rampioni, Giordano, Schmalen, Ira, Baker, Stephen, Pickard, Derek, Gray, Joe, Fookes, Maria, Winzer, Klaus, Ivens, Alasdair, Dougan, Gordon, Williams, Paul, Khan, C M Anjam

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Erratum: Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings von Feasey, Nicholas A, Hadfield, James, Keddy, Karen H, Dallman, Timothy J, Jacobs, Jan, Deng, Xiangyu, Wigley, Paul, Barquist, Lars, Langridge, Gemma C, Feltwell, Theresa, Harris, Simon R, Mather, Alison E, Fookes, Maria, Aslett, Martin, Msefula, Chisomo, Kariuki, Samuel, Maclennan, Calman A, Onsare, Robert S, Weill, François-Xavier, Le Hello, Simon, Smith, Anthony M, McClelland, Michael, Desai, Prerak, Parry, Christopher M, Cheesbrough, John, French, Neil, Campos, Josefina, Chabalgoity, Jose A, Betancor, Laura, Hopkins, Katie L, Nair, Satheesh, Humphrey, Tom J, Lunguya, Octavie, Cogan, Tristan A, Tapia, Milagritos D, Sow, Samba O, Tennant, Sharon M, Bornstein, Kristin, Levine, Myron M, Lacharme-Lora, Lizeth, Everett, Dean B, Kingsley, Robert A, Parkhill, Julian, Heyderman, Robert S, Dougan, Gordon, Gordon, Melita A, Thomson, Nicholas R

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Key outcomes from stakeholder workshops at a symposium to inform the development of an Australian national plan for rare diseases von Molster, Caron, Youngs, Leanne, Hammond, Emma, Dawkins, Hugh

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3D Brain MRI GAN-Based Synthesis Conditioned on Partial Volume Maps von Rusak, Filip, Santa Cruz, Rodrigo, Bourgeat, Pierrick, Fookes, Clinton, Fripp, Jurgen, Bradley, Andrew, Salvado, Olivier

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