Long-read assembly of the Brassica napus reference genome Darmor-bzh von Rousseau-Gueutin, Mathieu, Belser, Caroline, Da Silva, Corinne, Richard, Gautier, Istace, Benjamin, Cruaud, Corinne, Falentin, Cyril, Boideau, Franz, Boutte, Julien, Delourme, Regine, Deniot, Gwenaëlle, Engelen, Stefan, de Carvalho, Julie Ferreira, Lemainque, Arnaud, Maillet, Loeiz, Morice, Jérôme, Wincker, Patrick, Denoeud, France, Chèvre, Anne-Marie, Aury, Jean-Marc

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Untangling structural factors driving genome stabilization in nascent Brassica napus allopolyploids von de Carvalho, Julie Ferreira, Stoeckel, Solenn, Eber, Frédérique, Lodé-Taburel, Maryse, Gilet, Marie-Madeleine, Trotoux, Gwenn, Morice, Jérôme, Falentin, Cyril, Chèvre, Anne-Marie, Rousseau-Gueutin, Mathieu

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Phylogenomic analysis provides insights into MADS-box and TCP gene diversification and floral development of the Asteraceae, supported by de novo genome and transcriptome sequences... von Xiong, Wei, Risse, Judith, Berke, Lidija, Zhao, Tao, van de Geest, Henri, Oplaat, Carla, Busscher, Marco, Ferreira de Carvalho, Julie, van der Meer, Ingrid M, Verhoeven, Koen J F, Schranz, M Eric, Vijverberg, Kitty

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Intergenerational environmental effects: functional signals in offspring transcriptomes and metabolomes after parental jasmonic acid treatment in apomictic dandelion von Verhoeven, Koen J. F., Verbon, Eline H., Gurp, Thomas P., Oplaat, Carla, Ferreira de Carvalho, Julie, Morse, Alison M., Stahl, Mark, Macel, Mirka, McIntyre, Lauren M.

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Phenotyping data coupled with RNA sequencing of apple genotypes exhibiting contrasted quantitative trait loci architecture for apple scab (Venturia inaequalis) resistance von Bénéjam, Juliette, Ferreira de Carvalho, Julie, Ravon, Elisa, Heintz, Christelle, Gaucher, Matthieu, Durel, Charles-Eric, Brisset, Marie-Noëlle, Perchepied, Laure

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Impact of whole genome triplication on the evolutionary history and the functional dynamics of regulatory genes involved in Brassica self-incompatibility signalling pathway von Azibi, Thanina, Hadj-Arab, Houria, Lodé, Maryse, Ferreira de Carvalho, Julie, Trotoux, Gwenn, Nègre, Sylvie, Gilet, Marie-Madeleine, Boutte, Julien, Lucas, Jérémy, Vekemans, Xavier, Chèvre, Anne-Marie, Rousseau-Gueutin, Mathieu

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Combined cytogenetic and molecular methods for taxonomic verification and description of Brassica populations deriving from different origins von Falentin, Cyril, Hadj-Arab, Houria, Aissiou, Fella, Bartoli, Claudia, Bazan, Giuseppe, Boudet, Matéo, Bousset-Vaslin, Lydia, Chwikhi, Marwa, Coriton, Olivier, Deniot, Gwénaelle, Ferreira de Carvalho, Julie, Gay, Laurène, Geraci, Anna, Glory, Pascal, Huteau, Virginie, Ilahy, Riadh, Ilardi, Vincenzo, Jarillo, José A., Meglic, Vladimir, Oddo, Elisabetta, Pernas, Monica, Pineiro, Manuel, Pipan, Barbara, Rhim, Thouraya, Richer, Vincent, Rizza, Fulvia, Ronfort, Joelle, Rousseau-Gueutin, Mathieu, Schicchi, Rosario, Sinkovic, Lovro, Taburel, Maryse, Terzi, Valeria, Théréné, Sylvain, Tiret, Mathieu, Tlili, Imen, Wagner, Marie-Hélène, Werner Badeck, Franz, Chèvre, Anne-Marie

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Haplotype Detection from Next-Generation Sequencing in High-Ploidy-Level Species: 45S rDNA Gene Copies in the Hexaploid Spartina maritima von Boutte, Julien, Aliaga, Benoît, Lima, Oscar, Ferreira de Carvalho, Julie, Ainouche, Abdelkader, Macas, Jiri, Rousseau-Gueutin, Mathieu, Coriton, Olivier, Ainouche, Malika, Salmon, Armel

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The relative roles of local climate adaptation and phylogeny in determining leaf-out timing of temperate tree species von Desnoues, Elsa, Ferreira de Carvalho, Julie, Zohner, Constantin M., Crowther, Thomas W.

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first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in... von Martin, Guillaume E, Rousseau-Gueutin, Mathieu, Cordonnier, Solenn, Lima, Oscar, Michon-Coudouel, Sophie, Naquin, Delphine, de Carvalho, Julie Ferreira, Aïnouche, Malika, Salmon, Armel, Aïnouche, Abdelkader

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Identification and Quantification of Glucosinolates and Phenolics in a Large Panel of Brassica napus Highlight Valuable Genetic Resources for Chemical Ecology and Breeding von Missinou, Anani Amegan, Ferreira de Carvalho, Julie, Marnet, Nathalie, Delhaye, Thomas, Hamzaoui, Oumayma, Abdel Sayed, David, Guitton, Yann, Lebreton, Lionel, Langrume, Christophe, Laperche, Anne, Delourme, Régine, Manzanares-Dauleux, Maria J, Bouchereau, Alain, Gravot, Antoine

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Epigenomic and structural events preclude recombination in Brassica napus von Boideau, Franz, Richard, Gautier, Coriton, Olivier, Huteau, Virginie, Belser, Caroline, Deniot, Gwenaelle, Eber, Frédérique, Falentin, Cyril, Ferreira de Carvalho, Julie, Gilet, Marie, Lodé‐Taburel, Maryse, Maillet, Loeiz, Morice, Jérôme, Trotoux, Gwenn, Aury, Jean‐Marc, Chèvre, Anne‐Marie, Rousseau‐Gueutin, Mathieu

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Small RNAs Reflect Grandparental Environments in Apomictic Dandelion von Morgado, Lionel, Preite, Veronica, Oplaat, Carla, Anava, Sarit, Ferreira de Carvalho, Julie, Rechavi, Oded, Johannes, Frank, Verhoeven, Koen J.F.

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Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole‐genome duplications in Brassica von Ferreira de Carvalho, Julie, Lucas, Jérémy, Deniot, Gwenaëlle, Falentin, Cyril, Filangi, Olivier, Gilet, Marie, Legeai, Fabrice, Lode, Maryse, Morice, Jérôme, Trotoux, Gwenn, Aury, Jean‐Marc, Barbe, Valérie, Keller, Jean, Snowdon, Rod, He, Zhesi, Denoeud, France, Wincker, Patrick, Bancroft, Ian, Chèvre, Anne‐Marie, Rousseau‐Gueutin, Mathieu

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Transcriptome response of the foundation plant Spartina alterniflora to the Deepwater Horizon oil spill von Alvarez, Mariano, Ferreira de Carvalho, Julie, Salmon, Armel, Ainouche, Malika L., Cavé‐Radet, Armand, El Amrani, Abdelhak, Foster, Tammy E., Moyer, Sydney, Richards, Christina L.

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Gene expression variation in natural populations of hexaploid and allododecaploid Spartina species (Poaceae) von de Carvalho, Julie Ferreira, Boutte, Julien, Bourdaud, Pierre, Chelaifa, Houda, Ainouche, Kader, Salmon, Armel, Ainouche, Malika

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Persistence, dispersal and genetic evolution of recently formed Spartina homoploid hybrids and allopolyploids in Southern England von Huska, Dalibor, Leitch, Ilia J., de Carvalho, Julie Ferreira, Leitch, Andrew R., Salmon, Armel, Ainouche, Malika, Kovarik, Ales

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Genome Size Variation and Comparative Genomics Reveal Intraspecific Diversity in Brassica rapa von Boutte, Julien, Maillet, Loeiz, Chaussepied, Thomas, Letort, Sébastien, Aury, Jean-Marc, Belser, Caroline, Boideau, Franz, Brunet, Anael, Coriton, Olivier, Deniot, Gwenaëlle, Falentin, Cyril, Huteau, Virginie, Lodé-Taburel, Maryse, Morice, Jérôme, Trotoux, Gwenn, Chèvre, Anne-Marie, Rousseau-Gueutin, Mathieu, Ferreira de Carvalho, Julie

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Recent and dynamic transposable elements contribute to genomic divergence under asexuality von Ferreira de Carvalho, Julie, de Jager, Victor, van Gurp, Thomas P, Wagemaker, Niels C A M, Verhoeven, Koen J F

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Heritable gene expression differences between apomictic clone members in Taraxacum officinale: Insights into early stages of evolutionary divergence in asexual plants von Ferreira de Carvalho, Julie, Oplaat, Carla, Pappas, Nikolaos, Derks, Martijn, de Ridder, Dick, Verhoeven, Koen J F

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