Recombination in viruses: mechanisms, methods of study, and evolutionary consequences von Pérez-Losada, Marcos, Arenas, Miguel, Galán, Juan Carlos, Palero, Ferran, González-Candelas, Fernando

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SARS‐CoV‐2 RNA load in nasopharyngeal specimens from outpatients with breakthrough COVID‐19 due to Omicron BA.1 and BA.2 von Michelena, Paula, Olea, Beatriz, Torres, Ignacio, González‐Candelas, Fernando, Navarro, David

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Genetic determinants of host tropism in Klebsiella phages von Beamud, Beatriz, García-González, Neris, Gómez-Ortega, Mar, González-Candelas, Fernando, Domingo-Calap, Pilar, Sanjuan, Rafael

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One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads von Valiente-Mullor, Carlos, Beamud, Beatriz, Ansari, Iván, Francés-Cuesta, Carlos, García-González, Neris, Mejía, Lorena, Ruiz-Hueso, Paula, González-Candelas, Fernando

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Assessing the potential association between SARS‐CoV‐2 RNA load in the respiratory tract and COVID‐19 mortality von Albert, Eliseo, Bracho, Maria Alma, Serrano, Alicia, Ferrer, Blanca, González‐Candelas, Fernando, Navarro, David

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Effect of Ribavirin on the Mutation Rate and Spectrum of Hepatitis C Virus In Vivo von CUEVAS, José M, GONZALEZ-CANDELAS, Fernando, MOYA, Andrés, SANJUAN, Rafael

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Molecular characterization of Treponema pallidum subsp. pallidum in Switzerland and France with a new multilocus sequence typing scheme von Grillová, Linda, Bawa, Tanika, Mikalová, Lenka, Gayet-Ageron, Angèle, Nieselt, Kay, Strouhal, Michal, Sednaoui, Patrice, Ferry, Tristan, Cavassini, Matthias, Lautenschlager, Stephan, Dutly, Fabrizio, Pla-Díaz, Marta, Krützen, Michael, González-Candelas, Fernando, Bagheri, Homayoun C, Šmajs, David, Arora, Natasha, Bosshard, Philipp P

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Whole Genome Sequencing Analysis of Intrapatient Microevolution in Mycobacterium tuberculosis: Potential Impact on the Inference of Tuberculosis Transmission von Pérez-Lago, Laura, Comas, Iñaki, Navarro, Yurena, González-Candelas, Fernando, Herranz, Malta, Bouza, Emilio, Garcia-de-Viedma, Darío

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Comprehensive Screening for Naturally Occurring Hepatitis C Virus Resistance to Direct-Acting Antivirals in the NS3, NS5A, and NS5B Genes in Worldwide Isolates of Viral Genotypes 1... von Patiño-Galindo, Juan Ángel, Salvatierra, Karina, González-Candelas, Fernando, López-Labrador, F Xavier

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Enterovirus co-infections and onychomadesis after hand, foot, and mouth disease, Spain, 2008 von Bracho, Maria A, González-Candelas, Fernando, Valero, Ana, Córdoba, Juan, Salazar, Antonio

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Listeria monocytogenes , a silent foodborne pathogen in Ecuador von Mejía, Lorena, Espinosa-Mata, Estefanía, Freire, Ana Lucía, Zapata, Sonia, González-Candelas, Fernando

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Domain Organization and Evolution of Multifunctional Autoprocessing Repeats-in-Toxin (MARTX) Toxin in Vibrio vulnificus von Roig, Francisco J, González-Candelas, Fernando, Amaro, Carmen

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Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex von Chiner-Oms, Álvaro, Berney, Michael, Boinett, Christine, González-Candelas, Fernando, Young, Douglas B., Gagneux, Sebastien, Jacobs, William R., Parkhill, Julian, Cortes, Teresa, Comas, Iñaki

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The population genetics and evolutionary epidemiology of RNA viruses von Moya, Andrés, Holmes, Edward C., González-Candelas, Fernando

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Insights into Treponema pallidum genomics from modern and ancient genomes using a novel mapping strategy von Pla-Díaz, Marta, Akgül, Gülfirde, Molak, Martyna, du Plessis, Louis, Panagiotopoulou, Hanna, Doan, Karolina, Bogdanowicz, Wiesław, Dąbrowski, Paweł, Oziembłowski, Maciej, Kwiatkowska, Barbara, Szczurowski, Jacek, Grzelak, Joanna, Arora, Natasha, Majander, Kerttu, González-Candelas, Fernando, Schuenemann, Verena J

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Inference of the Life Cycle of Environmental Phages from Genomic Signature Distances to Their Hosts von Arnau, Vicente, Díaz-Villanueva, Wladimiro, Mifsut Benet, Jorge, Villasante, Paula, Beamud, Beatriz, Mompó, Paula, Sanjuan, Rafael, González-Candelas, Fernando, Domingo-Calap, Pilar, Džunková, Mária

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Genotypic and phenotypic characterisation of a nosocomial outbreak of Candida auris in Spain during 5 years von Mulet‐Bayona, Juan Vicente, Cancino‐Muñoz, Irving, Salvador‐García, Carme, Tormo‐Palop, Nuria, Guna‐Serrano, María del Remedio, Ferrer‐Gómez, Carolina, Melero‐García, Mercedes, González‐Candelas, Fernando, Gimeno‐Cardona, Concepción

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Incidence and molecular epidemiology of hepatitis C virus reinfection in prisons in Catalonia, Spain (Re-HCV study) von Saludes, Verónica, Bordoy, Antoni E., Yela, Elena, Turú, Elisabet, Not, Anna, López-Corbeto, Evelin, Egea-Cortés, Laia, González-Candelas, Fernando, Casabona, Jordi, Marco, Andrés, Martró, Elisa

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Evolutionary trajectories of beta-lactamase CTX-M-1 cluster enzymes: predicting antibiotic resistance von Novais, Angela, Comas, Iñaki, Baquero, Fernando, Cantón, Rafael, Coque, Teresa M, Moya, Andrés, González-Candelas, Fernando, Galán, Juan-Carlos

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Molecular evolution in court: analysis of a large hepatitis C virus outbreak from an evolving source von González-Candelas, Fernando, Bracho, María Alma, Wróbel, Borys, Moya, Andrés

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