SKEMPI 2.0: an updated benchmark of changes in protein–protein binding energy, kinetics and thermodynamics upon mutation von Jankauskaitė, Justina, Jiménez-García, Brian, Dapkūnas, Justas, Fernández-Recio, Juan, Moal, Iain H

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LightDock: a new multi-scale approach to protein-protein docking von Jiménez-García, Brian, Roel-Touris, Jorge, Romero-Durana, Miguel, Vidal, Miquel, Jiménez-González, Daniel, Fernández-Recio, Juan

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Updates to the Integrated Protein–Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2 von Vreven, Thom, Moal, Iain H., Vangone, Anna, Pierce, Brian G., Kastritis, Panagiotis L., Torchala, Mieczyslaw, Chaleil, Raphael, Jiménez-García, Brian, Bates, Paul A., Fernandez-Recio, Juan, Bonvin, Alexandre M.J.J., Weng, Zhiping

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pyDockSAXS: protein-protein complex structure by SAXS and computational docking von Jiménez-García, Brian, Pons, Carles, Svergun, Dmitri I, Bernadó, Pau, Fernández-Recio, Juan

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The scoring of poses in protein-protein docking: current capabilities and future directions von Moal, Iain H, Torchala, Mieczyslaw, Bates, Paul A, Fernández-Recio, Juan

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Integrative modeling of protein‐protein interactions with pyDock for the new docking challenges von Rosell, Mireia, Rodríguez‐Lumbreras, Luis A., Romero‐Durana, Miguel, Jiménez‐García, Brian, Díaz, Lucía, Fernández‐Recio, Juan

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pyDock: Electrostatics and desolvation for effective scoring of rigid-body protein-protein docking von Cheng, Tammy Man-Kuang, Blundell, Tom L., Fernandez-Recio, Juan

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Structural vulnerability in EPCR suggests functional modulation von Erausquin, Elena, Rodríguez-Fernández, Adela, Rodríguez-Lumbreras, Luis Ángel, Fernández-Recio, Juan, Dichiara-Rodríguez, María Gilda, López-Sagaseta, Jacinto

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Present and future challenges and limitations in protein-protein docking von Pons, Carles, Grosdidier, Solène, Solernou, Albert, Pérez-Cano, Laura, Fernández-Recio, Juan

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Prediction of protein-binding areas by small-world residue networks and application to docking von Pons, Carles, Glaser, Fabian, Fernandez-Recio, Juan

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Optimal docking area: A new method for predicting protein-protein interaction sites von Fernandez-Recio, Juan, Totrov, Max, Skorodumov, Constantin, Abagyan, Ruben

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LRR conservation mapping to predict functional sites within protein leucine-rich repeat domains von Helft, Laura, Reddy, Vignyan, Chen, Xiyang, Koller, Teresa, Federici, Luca, Fernández-Recio, Juan, Gupta, Rishabh, Bent, Andrew

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Characterizing changes in the rate of protein-protein dissociation upon interface mutation using hotspot energy and organization von Agius, Rudi, Torchala, Mieczyslaw, Moal, Iain H, Fernández-Recio, Juan, Bates, Paul A

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SwarmDock: a server for flexible protein-protein docking von Torchala, Mieczyslaw, Moal, Iain H, Chaleil, Raphael A G, Fernandez-Recio, Juan, Bates, Paul A

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Structural characterization of unphosphorylated STAT5a oligomerization equilibrium in solution by small‐angle X‐ray scattering von Bernadó, Pau, Pérez, Yolanda, Blobel, Jascha, Fernández‐Recio, Juan, Svergun, Dmitri I., Pons, Miquel

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Structural basis for the dominant or recessive character of GLIALCAM mutations found in leukodystrophies von Elorza-Vidal, Xabier, Xicoy-Espaulella, Efren, Pla-Casillanis, Adria, Alonso-Gardon, Marta, Gaitan-Penas, Hector, Engel-Pizcueta, Carolyn, Fernandez-Recio, Juan, Estevez, Raul

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Diverging co-translational protein complex assembly pathways are governed by interface energy distribution von Venezian, Johannes, Bar-Yosef, Hagit, Ben-Arie Zilberman, Hila, Cohen, Noam, Kleifeld, Oded, Fernandez-Recio, Juan, Glaser, Fabian, Shiber, Ayala

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IRaPPA: information retrieval based integration of biophysical models for protein assembly selection von Moal, Iain H, Barradas-Bautista, Didier, Jiménez-García, Brian, Torchala, Mieczyslaw, van der Velde, Arjan, Vreven, Thom, Weng, Zhiping, Bates, Paul A, Fernández-Recio, Juan

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pyDockWEB: a web server for rigid-body protein-protein docking using electrostatics and desolvation scoring von Jiménez-García, Brian, Pons, Carles, Fernández-Recio, Juan

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Novel treatment strategy for NRAS-mutated melanoma through a selective inhibitor of CD147/VEGFR-2 interaction von Landras, Alexandra, Reger de Moura, Coralie, Villoutreix, Bruno O., Battistella, Maxime, Sadoux, Aurélie, Dumaz, Nicolas, Menashi, Suzanne, Fernández-Recio, Juan, Lebbé, Céleste, Mourah, Samia

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