Genome-wide Single-Cell Analysis of Recombination Activity and De Novo Mutation Rates in Human Sperm von Wang, Jianbin, Fan, H. Christina, Behr, Barry, Quake, Stephen R.

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Reliability of human cortical organoid generation von Yoon, Se-Jin, Elahi, Lubayna S., Pașca, Anca M., Marton, Rebecca M., Gordon, Aaron, Revah, Omer, Miura, Yuki, Walczak, Elisabeth M., Holdgate, Gwendolyn M., Fan, H. Christina, Huguenard, John R., Geschwind, Daniel H., Pașca, Sergiu P.

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Generation of Functional Human 3D Cortico-Motor Assembloids von Andersen, Jimena, Revah, Omer, Miura, Yuki, Thom, Nicholas, Amin, Neal D., Kelley, Kevin W., Singh, Mandeep, Chen, Xiaoyu, Thete, Mayuri Vijay, Walczak, Elisabeth M., Vogel, Hannes, Fan, H. Christina, Paşca, Sergiu P.

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Combinatorial labeling of single cells for gene expression cytometry von Fan, H. Christina, Fu, Glenn K., Fodor, Stephen P. A.

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Non-invasive prenatal measurement of the fetal genome von Fan, H. Christina, Gu, Wei, Wang, Jianbin, Blumenfeld, Yair J., El-Sayed, Yasser Y., Quake, Stephen R.

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Noninvasive in vivo monitoring of tissue-specific global gene expression in humans von Koh, Winston, Pan, Wenying, Gawad, Charles, Fan, H. Christina, Kerchner, Geoffrey A., Wyss-Coray, Tony, Blumenfeld, Yair J., El-Sayed, Yasser Y., Quake, Stephen R.

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Assembly of functionally integrated human forebrain spheroids von Birey, Fikri, Andersen, Jimena, Makinson, Christopher D., Islam, Saiful, Wei, Wu, Huber, Nina, Fan, H. Christina, Metzler, Kimberly R. Cordes, Panagiotakos, Georgia, Thom, Nicholas, O’Rourke, Nancy A., Steinmetz, Lars M., Bernstein, Jonathan A., Hallmayer, Joachim, Huguenard, John R., Paşca, Sergiu P.

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Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood von Fan, H. Christina, Blumenfeld, Yair J, Chitkara, Usha, Hudgins, Louanne, Quake, Stephen R

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An interpretable framework for clustering single-cell RNA-Seq datasets von Zhang, Jesse M, Fan, Jue, Fan, H Christina, Rosenfeld, David, Tse, David N

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Analysis of the size distributions of fetal and maternal cell-free DNA by paired-end sequencing von Fan, H Christina, Blumenfeld, Yair J, Chitkara, Usha, Hudgins, Louanne, Quake, Stephen R

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The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line von Xu, Xun, Nagarajan, Harish, Lewis, Nathan E, Pan, Shengkai, Cai, Zhiming, Liu, Xin, Chen, Wenbin, Xie, Min, Wang, Wenliang, Hammond, Stephanie, Andersen, Mikael R, Neff, Norma, Passarelli, Benedetto, Koh, Winston, Fan, H Christina, Wang, Jianbin, Gui, Yaoting, Lee, Kelvin H, Betenbaugh, Michael J, Quake, Stephen R, Famili, Iman, Palsson, Bernhard O, Wang, Jun

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Sensitivity of noninvasive prenatal detection of fetal aneuploidy from maternal plasma using shotgun sequencing is limited only by counting statistics von Fan, H Christina, Quake, Stephen R

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The genome sequence of the colonial chordate, Botryllus schlosseri von Voskoboynik, Ayelet, Neff, Norma F, Sahoo, Debashis, Newman, Aaron M, Pushkarev, Dmitry, Koh, Winston, Passarelli, Benedetto, Fan, H Christina, Mantalas, Gary L, Palmeri, Karla J, Ishizuka, Katherine J, Gissi, Carmela, Griggio, Francesca, Ben-Shlomo, Rachel, Corey, Daniel M, Penland, Lolita, White, 3rd, Richard A, Weissman, Irving L, Quake, Stephen R

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Digital PCR provides sensitive and absolute calibration for high throughput sequencing von White, 3rd, Richard A, Blainey, Paul C, Fan, H Christina, Quake, Stephen R

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Identification of a Colonial Chordate Histocompatibility Gene von Voskoboynik, Ayelet, Newman, Aaron M., Corey, Daniel M., Sahoo, Debashis, Pushkarev, Dmitry, Neff, Norma F., Passarelli, Benedetto, Koh, Winston, Ishizuka, Katherine J., Palmeri, Karla J., Dimov, Ivan K., Keasar, Chen, Fan, H. Christina, Mantalas, Gary L., Sinha, Rahul, Penland, Lolita, Quake, Stephen R., Weissman, Irving L.

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Microfluidic digital PCR enables rapid prenatal diagnosis of fetal aneuploidy von Fan, H. Christina, MSc, Blumenfeld, Yair J., MD, El-Sayed, Yasser Y., MD, Chueh, Jane, MD, Quake, Stephen R., DPhil

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Whole-genome molecular haplotyping of single cells von Fan, H Christina, Wang, Jianbin, Potanina, Anastasia, Quake, Stephen R

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Detection of Aneuploidy with Digital Polymerase Chain Reaction von Fan, H. Christina, Quake, Stephen R

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Next-Generation Digital Polymerase Chain Reaction: High-Dynamic-Range Single-Molecule DNA Counting via Ultrapartitioning von Shum, Eleen Y., Lai, Janice H., Li, Sixing, Lee, Haeun G., Soliman, Jesse, Raol, Vedant K., Lee, Cavina K., Fodor, Stephen P.A., Fan, H. Christina

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Digital Encoding of Cellular mRNAs Enabling Precise and Absolute Gene Expression Measurement by Single-Molecule Counting von Fu, Glenn K, Wilhelmy, Julie, Stern, David, Fan, H. Christina, Fodor, Stephen P. A

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