MMSplice: modular modeling improves the predictions of genetic variant effects on splicing von Cheng, Jun, Nguyen, Thi Yen Duong, Cygan, Kamil J, Çelik, Muhammed Hasan, Fairbrother, William G, Avsec, Žiga, Gagneur, Julien

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Large-scale analysis of branchpoint usage across species and cell lines von Taggart, Allison J, Lin, Chien-Ling, Shrestha, Barsha, Heintzelman, Claire, Kim, Seongwon, Fairbrother, William G

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Using positional distribution to identify splicing elements and predict pre-mRNA processing defects in human genes von Lim, Kian Huat, Ferraris, Luciana, Filloux, Madeleine E., Raphae, Benjamin J., Fairbrother, William G.

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Massively parallel reporter assays discover de novo exonic splicing mutants in paralogs of Autism genes von Rhine, Christy L, Neil, Christopher, Wang, Jing, Maguire, Samantha, Buerer, Luke, Salomon, Mitchell, Meremikwu, Ijeoma C, Kim, Juliana, Strande, Natasha T, Fairbrother, William G

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Predictive Identification of Exonic Splicing Enhancers in Human Genes von Fairbrother, William G., Yeh, Ru-Fang, Sharp, Phillip A., Burge, Christopher B.

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Mutational bias and the protein code shape the evolution of splicing enhancers von Rong, Stephen, Buerer, Luke, Rhine, Christy L., Wang, Jing, Cygan, Kamil J., Fairbrother, William G.

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The importance of p53 pathway genetics in inherited and somatic cancer genomes von Stracquadanio, Giovanni, Wang, Xuting, Wallace, Marsha D., Grawenda, Anna M., Zhang, Ping, Hewitt, Juliet, Zeron-Medina, Jorge, Castro-Giner, Francesc, Tomlinson, Ian P., Goding, Colin R., Cygan, Kamil J., Fairbrother, William G., Thomas, Laurent F., Sætrom, Pål, Gemignani, Federica, Landi, Stefano, Schuster-Böckler, Benjamin, Bell, Douglas A., Bond, Gareth L.

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Hotspot exons are common targets of splicing perturbations von Glidden, David T., Buerer, Jeramiah L., Saueressig, Camillo F., Fairbrother, William G.

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The unusual gene architecture of polyubiquitin is created by dual-specific splice sites von Duan, Chaorui, Mooney, Truman, Buerer, Luke, Bowers, Cory, Rong, Stephen, Kim, Seong Won, Fredericks, Alger M, Monaghan, Sean F, Fairbrother, William G

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Hereditary cancer genes are highly susceptible to splicing mutations von Rhine, Christy L, Cygan, Kamil J, Soemedi, Rachel, Maguire, Samantha, Murray, Michael F, Monaghan, Sean F, Fairbrother, William G

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Recessive truncating titin gene, TTN, mutations presenting as centronuclear myopathy von Ceyhan-Birsoy, Ozge, Agrawal, Pankaj B., Hidalgo, Carlos, Schmitz-Abe, Klaus, DeChene, Elizabeth T., Swanson, Lindsay C., Soemedi, Rachel, Vasli, Nasim, Iannaccone, Susan T., Shieh, Perry B., Shur, Natasha, Dennison, Jane M., Lawlor, Michael W., Laporte, Jocelyn, Markianos, Kyriacos, Fairbrother, William G., Granzier, Henk, Beggs, Alan H.

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The debranching enzyme Dbr1 regulates lariat turnover and intron splicing von Buerer, Luke, Clark, Nathaniel E., Welch, Anastasia, Duan, Chaorui, Taggart, Allison J., Townley, Brittany A., Wang, Jing, Soemedi, Rachel, Rong, Stephen, Lin, Chien-Ling, Zeng, Yi, Katolik, Adam, Staley, Jonathan P., Damha, Masad J., Mosammaparast, Nima, Fairbrother, William G.

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Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo von Taggart, Allison J, DeSimone, Alec M, Shih, Janice S, Filloux, Madeleine E, Fairbrother, William G

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Deep RNA sequencing of intensive care unit patients with COVID-19 von Fredericks, Alger M., Jentzsch, Maximilian S., Cioffi, William G., Cohen, Maya, Fairbrother, William G., Gandhi, Shivam J., Harrington, Elizabeth O., Nau, Gerard J., Reichner, Jonathan S., Ventetuolo, Corey E., Levy, Mitchell M., Ayala, Alfred, Monaghan, Sean F.

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A general mechanism for transcription regulation by Oct1 and Oct4 in response to genotoxic and oxidative stress von Kang, Jinsuk, Gemberling, Matthew, Nakamura, Mitsuhiro, Whitby, Frank G, Handa, Hiroshi, Fairbrother, William G, Tantin, Dean

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Single nucleotide polymorphism-based validation of exonic splicing enhancers von Fairbrother, William G, Holste, Dirk, Burge, Christopher B, Sharp, Phillip A

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RNA-Binding Proteins: Splicing Factors and Disease von Fredericks, Alger M, Cygan, Kamil J, Brown, Brian A, Fairbrother, William G

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Soluble programmed cell death receptor-1 (sPD-1): a potential biomarker with anti-inflammatory properties in human and experimental acute respiratory distress syndrome (ARDS) von Monaghan, Sean F, Chung, Chun-Shiang, Chen, Yaping, Lomas-Neira, Joanne, Fairbrother, William G, Heffernan, Daithi S, Cioffi, William G, Ayala, Alfred

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Changes in the process of alternative RNA splicing results in soluble B and T lymphocyte attenuator with biological and clinical implications in critical illness von Monaghan, Sean F, Banerjee, Debasree, Chung, Chun-Shiang, Lomas-Neira, Joanne, Cygan, Kamil J, Rhine, Christy L, Fairbrother, William G, Heffernan, Daithi S, Levy, Mitchell M, Cioffi, William G, Ayala, Alfred

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Non-cancer-related pathogenic germline variants and expression consequences in ten-thousand cancer genomes von Wang, Zishan, Fan, Xiao, Shen, Yufeng, Pagadala, Meghana S, Signer, Rebecca, Cygan, Kamil J, Fairbrother, William G, Carter, Hannah, Chung, Wendy K, Huang, Kuan-Lin

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