On a model of online analog computation in the cell with absolute functional robustness: Algebraic characterization, function compiler and error control von Hemery, Mathieu, Fages, François

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Long-term model predictive control of gene expression at the population and single-cell levels von Uhlendorf, Jannis, Miermont, Agnès, Delaveau, Thierry, Charvin, Gilles, Fages, François, Bottani, Samuel, Batt, Gregory, Hersen, Pascal

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Inferring reaction systems from ordinary differential equations von Fages, François, Gay, Steven, Soliman, Sylvain

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Graphical requirements for multistationarity in reaction networks and their verification in BioModels von Baudier, Adrien, Fages, François, Soliman, Sylvain

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A Constraint-Based Mathematical Modeling Library in Prolog with Answer Constraint Semantics von Fages, François

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BIOCHAM: an environment for modeling biological systems and formalizing experimental knowledge von Calzone, Laurence, Fages, François, Soliman, Sylvain

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Logical model specification aided by model-checking techniques: application to the mammalian cell cycle regulation von Traynard, Pauline, Fauré, Adrien, Fages, François, Thieffry, Denis

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Computer‐aided biochemical programming of synthetic microreactors as diagnostic devices von Courbet, Alexis, Amar, Patrick, Fages, François, Renard, Eric, Molina, Franck

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A skin microbiome model with AMP interactions and analysis of quasi-stability vs stability in population dynamics von Thibault Greugny, Eléa, Fages, François, Radulescu, Ovidiu, Szmolyan, Peter, Stamatas, Georgios N.

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Mathematical modeling of the microtubule detyrosination/tyrosination cycle for cell-based drug screening design von Grignard, Jeremy, Lamamy, Véronique, Vermersch, Eva, Delagrange, Philippe, Stephan, Jean-Philippe, Dorval, Thierry, Fages, François

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Abstract interpretation and types for systems biology von Fages, François, Soliman, Sylvain

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Computational modelling predicts impaired barrier function and higher sensitivity to skin inflammation following pH elevation von Thibault Greugny, Eléa, Bensaci, Jalil, Fages, François, Stamatas, Georgios N.

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A graphical method for reducing and relating models in systems biology von Gay, Steven, Soliman, Sylvain, Fages, François

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Model learning to identify systemic regulators of the peripheral circadian clock von Martinelli, Julien, Dulong, Sandrine, Li, Xiao-Mei, Teboul, Michèle, Soliman, Sylvain, Lévi, Francis, Fages, François, Ballesta, Annabelle

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Graphical Conditions Ensuring Equality Between Differential and Mean Stochastic Dynamics von Buscemi, Hugo, Fages, François

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A general computational method for robustness analysis with applications to synthetic gene networks von Rizk, Aurélien, Batt, Gregory, Fages, François, Soliman, Sylvain

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Computer‐aided biochemical programming of synthetic microreactors as diagnostic devices von Courbet, Alexis, Amar, Patrick, Fages, François, Renard, Eric, Molina, Franck

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On Estimating Derivatives of Input Signals in Biochemistry von Hemery, Mathieu, Fages, François

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On Robustness Computation and Optimization in BIOCHAM-4 von Fages, François, Soliman, Sylvain

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Influence Networks Compared with Reaction Networks: Semantics, Expressivity and Attractors von Fages, Francois, Martinez, Thierry, Rosenblueth, David A., Soliman, Sylvain

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