Comprehensive single-cell transcriptional profiling of a multicellular organism von Cao, Junyue, Packer, Jonathan S., Ramani, Vijay, Cusanovich, Darren A., Huynh, Chau, Daza, Riza, Qiu, Xiaojie, Lee, Choli, Furlan, Scott N., Steemers, Frank J., Adey, Andrew, Waterston, Robert H., Trapnell, Cole, Shendure, Jay

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Single-cell CUT&Tag analysis of chromatin modifications in differentiation and tumor progression von Wu, Steven J., Furlan, Scott N., Mihalas, Anca B., Kaya-Okur, Hatice S., Feroze, Abdullah H., Emerson, Samuel N., Zheng, Ye, Carson, Kalee, Cimino, Patrick J., Keene, C. Dirk, Sarthy, Jay F., Gottardo, Raphael, Ahmad, Kami, Henikoff, Steven, Patel, Anoop P.

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Immunogenic Chemotherapy Enhances Recruitment of CAR-T Cells to Lung Tumors and Improves Antitumor Efficacy when Combined with Checkpoint Blockade von Srivastava, Shivani, Furlan, Scott N., Jaeger-Ruckstuhl, Carla A., Sarvothama, Megha, Berger, Carolina, Smythe, Kimberly S., Garrison, Sarah M., Specht, Jennifer M., Lee, Sylvia M., Amezquita, Robert A., Voillet, Valentin, Muhunthan, Vishaka, Yechan-Gunja, Sushma, Pillai, Smitha P.S., Rader, Christoph, Houghton, A. McGarry, Pierce, Robert H., Gottardo, Raphael, Maloney, David G., Riddell, Stanley R.

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Chimeric Antigen Receptor T Cell-Mediated Neurotoxicity in Nonhuman Primates von Taraseviciute, Agne, Tkachev, Victor, Ponce, Rafael, Turtle, Cameron J, Snyder, Jessica M, Liggitt, H Denny, Myerson, David, Gonzalez-Cuyar, Luis, Baldessari, Audrey, English, Chris, Yu, Alison, Zheng, Hengqi, Furlan, Scott N, Hunt, Daniel J, Hoglund, Virginia, Finney, Olivia, Brakke, Hannah, Blazar, Bruce R, Berger, Carolina, Riddell, Stanley R, Gardner, Rebecca, Kean, Leslie S, Jensen, Michael C

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Characterization of the immune microenvironment of diffuse intrinsic pontine glioma: implications for development of immunotherapy von Lieberman, Nicole A P, DeGolier, Kole, Kovar, Heather M, Davis, Amira, Hoglund, Virginia, Stevens, Jeffrey, Winter, Conrad, Deutsch, Gail, Furlan, Scott N, Vitanza, Nicholas A, Leary, Sarah E S, Crane, Courtney A

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TIGIT inhibition and lenalidomide synergistically promote antimyeloma immune responses after stem cell transplantation in mice von Minnie, Simone A, Waltner, Olivia G, Ensbey, Kathleen S, Olver, Stuart D, Collinge, Alika D, Sester, David P, Schmidt, Christine R, Legg, Samuel Rw, Takahashi, Shuichiro, Nemychenkov, Nicole S, Sekiguchi, Tomoko, Driessens, Gregory, Zhang, Ping, Koyama, Motoko, Spencer, Andrew, Holmberg, Leona A, Furlan, Scott N, Varelias, Antiopi, Hill, Geoffrey R

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Integrated stem cell signature and cytomolecular risk determination in pediatric acute myeloid leukemia von Huang, Benjamin J., Smith, Jenny L., Farrar, Jason E., Wang, Yi-Cheng, Umeda, Masayuki, Ries, Rhonda E., Leonti, Amanda R., Crowgey, Erin, Furlan, Scott N., Tarlock, Katherine, Armendariz, Marcos, Liu, Yanling, Shaw, Timothy I., Wei, Lisa, Gerbing, Robert B., Cooper, Todd M., Gamis, Alan S., Aplenc, Richard, Kolb, E. Anders, Rubnitz, Jeffrey, Ma, Jing, Klco, Jeffery M., Ma, Xiaotu, Alonzo, Todd A., Triche, Timothy, Meshinchi, Soheil

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High-capacity sample multiplexing for single cell chromatin accessibility profiling von Booth, Gregory T, Daza, Riza M, Srivatsan, Sanjay R, McFaline-Figueroa, José L, Gladden, Rula Green, Mullen, Andrew C, Furlan, Scott N, Shendure, Jay, Trapnell, Cole

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NOTCH1 signaling during CD4+ T-cell activation alters transcription factor networks and enhances antigen responsiveness von Wilkens, Alec B., Fulton, Elena C., Pont, Margot J., Cole, Gabriel O., Leung, Isabel, Stull, Sylvia M., Hart, Matthew R., Bernstein, Irwin D., Furlan, Scott N., Riddell, Stanley R.

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Scalable single-cell profiling of chromatin modifications with sciCUT&Tag von Janssens, Derek H., Greene, Jacob E., Wu, Steven J., Codomo, Christine A., Minot, Samuel S., Furlan, Scott N., Ahmad, Kami, Henikoff, Steven

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CD28 blockade controls T cell activation to prevent graft-versus-host disease in primates von Watkins, Benjamin K, Tkachev, Victor, Furlan, Scott N, Hunt, Daniel J, Betz, Kayla, Yu, Alison, Brown, Melanie, Poirier, Nicolas, Zheng, Hengqi Betty, Taraseviciute, Agne, Colonna, Lucrezia, Mary, Caroline, Blancho, Gilles, Soulillou, Jean-Paul, Panoskaltsis-Mortari, Angela, Sharma, Prachi, Garcia, Anapatricia, Strobert, Elizabeth, Hamby, Kelly, Garrett, Aneesah, Deane, Taylor, Blazar, Bruce R, Vanhove, Bernard, Kean, Leslie S

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Cancer-Associated Fibroblast-Like Tumor Cells Remodel the Ewing Sarcoma Tumor Microenvironment von Wrenn, Emma D, Apfelbaum, April A, Rudzinski, Erin R, Deng, Xuemei, Jiang, Wei, Sud, Sudha, Van Noord, Raelene A, Newman, Erika A, Garcia, Nicolas M, Miyaki, Aya, Hoglund, Virginia J, Bhise, Shruti S, Kanaan, Sami B, Waltner, Olivia G, Furlan, Scott N, Lawlor, Elizabeth R

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EWS::FLI1 and HOXD13 Control Tumor Cell Plasticity in Ewing Sarcoma von Apfelbaum, April A, Wu, Feinan, Hawkins, Allegra G, Magnuson, Brian, Jiménez, Jennifer A, Taylor, Sean D, Wrenn, Emma D, Waltner, Olivia, Pfaltzgraff, Elise R, Song, Jane Y, Hall, Cody, Wellik, Deneen M, Ljungman, Mats, Furlan, Scott N, Ryan, Russell J H, Sarthy, Jay F, Lawlor, Elizabeth R

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Functional consequence and therapeutic targeting of cryptic ALK fusions in monosomy 7 acute myeloid leukemia von Manselle, Makia K., Ries, Rhonda E., Hylkema, Tiffany, Leonti, Amanda, Kirkey, Danielle C., Furlan, Scott N., Meshinchi, Soheil

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CBFA2T3-GLIS2 model of pediatric acute megakaryoblastic leukemia identifies FOLR1 as a CAR T cell target von Le, Quy, Hadland, Brandon, Smith, Jenny L, Leonti, Amanda, Huang, Benjamin J, Ries, Rhonda, Hylkema, Tiffany A, Castro, Sommer, Tang, Thao T, McKay, Cyd N, Perkins, LaKeisha, Pardo, Laura, Sarthy, Jay, Beckman, Amy K, Williams, Robin, Idemmili, Rhonda, Furlan, Scott, Ishida, Takashi, Call, Lindsey, Srivastava, Shivani, Loeb, Anisha M, Milano, Filippo, Imren, Suzan, Morris, Shelli M, Pakiam, Fiona, Olson, Jim M, Loken, Michael R, Brodersen, Lisa, Riddell, Stanley R, Tarlock, Katherine, Bernstein, Irwin D, Loeb, Keith R, Meshinchi, Soheil

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Microbiota dictate T cell clonal selection to augment graft-versus-host disease after stem cell transplantation von Yeh, Albert C., Koyama, Motoko, Waltner, Olivia G., Minnie, Simone A., Boiko, Julie R., Shabaneh, Tamer B., Takahashi, Shuichiro, Zhang, Ping, Ensbey, Kathleen S., Schmidt, Christine R., Legg, Samuel R.W., Sekiguchi, Tomoko, Nelson, Ethan, Bhise, Shruti S., Stevens, Andrew R., Goodpaster, Tracy, Chakka, Saranya, Furlan, Scott N., Markey, Kate A., Bleakley, Marie E., Elson, Charles O., Bradley, Philip H., Hill, Geoffrey R.

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Calcineurin inhibition rescues alloantigen-specific central memory T cell subsets that promote chronic GVHD von Wang, Yewei, Ullah, Md Ashik, Waltner, Olivia G, Bhise, Shruti S, Ensbey, Kathleen S, Schmidt, Christine R, Legg, Samuel Rw, Sekiguchi, Tomoko, Nelson, Ethan L, Kuns, Rachel D, Nemychenkov, Nicole S, Atilla, Erden, Yeh, Albert C, Takahashi, Shuichiro, Boiko, Julie R, Varelias, Antiopi, Blazar, Bruce R, Koyama, Motoko, Minnie, Simone A, Clouston, Andrew D, Furlan, Scott N, Zhang, Ping, Hill, Geoffrey R

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Programmed death ligand-1 expression on donor T cells drives graft-versus-host disease lethality von Saha, Asim, O'Connor, Roddy S, Thangavelu, Govindarajan, Lovitch, Scott B, Dandamudi, Durga Bhavani, Wilson, Caleph B, Vincent, Benjamin G, Tkachev, Victor, Pawlicki, Jan M, Furlan, Scott N, Kean, Leslie S, Aoyama, Kazutoshi, Taylor, Patricia A, Panoskaltsis-Mortari, Angela, Foncea, Rocio, Ranganathan, Parvathi, Devine, Steven M, Burrill, Joel S, Guo, Lili, Sacristan, Catarina, Snyder, Nathaniel W, Blair, Ian A, Milone, Michael C, Dustin, Michael L, Riley, James L, Bernlohr, David A, Murphy, William J, Fife, Brian T, Munn, David H, Miller, Jeffrey S, Serody, Jonathan S, Freeman, Gordon J, Sharpe, Arlene H, Turka, Laurence A, Blazar, Bruce R

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Signaling via a CD27-TRAF2-SHP-1 axis during naive T cell activation promotes memory-associated gene regulatory networks von Jaeger-Ruckstuhl, Carla A., Lo, Yun, Fulton, Elena, Waltner, Olivia G., Shabaneh, Tamer B., Simon, Sylvain, Muthuraman, Pranav V., Correnti, Colin E., Newsom, Oliver J., Engstrom, Ian A., Kanaan, Sami B., Bhise, Shruti S., Peralta, Jobelle M.C., Ruff, Raymond, Price, Jason P., Stull, Sylvia M., Stevens, Andrew R., Bugos, Grace, Kluesner, Mitchell G., Voillet, Valentin, Muhunthan, Vishaka, Morrish, Fionnuala, Olson, James M., Gottardo, Raphaël, Sarthy, Jay F., Henikoff, Steven, Sullivan, Lucas B., Furlan, Scott N., Riddell, Stanley R.

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Human CD19-Targeted Mouse T Cells Induce B Cell Aplasia and Toxicity in Human CD19 Transgenic Mice von Pennell, Christopher A., Barnum, Jessie L., McDonald-Hyman, Cameron S., Panoskaltsis-Mortari, Angela, Riddle, Megan J., Xiong, Zhengming, Loschi, Michael, Thangavelu, Govindarajan, Campbell, Heather M., Storlie, Meghan D., Refaeli, Yosef, Furlan, Scott N., Jensen, Michael C., Kean, Leslie S., Miller, Jeffrey S., Tolar, Jakub, Osborn, Mark J., Blazar, Bruce R.

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