Algorithms in Bioinformatics: 16th International Workshop, WABI 2016, Aarhus, Denmark, August 22-24, 2016. Proceedings von Frith, Martin, Storm Pedersen, Christian Nørgaard

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An atlas of active enhancers across human cell types and tissues von Andersson, Robin, Gebhard, Claudia, Miguel-Escalada, Irene, Hoof, Ilka, Bornholdt, Jette, Boyd, Mette, Chen, Yun, Zhao, Xiaobei, Schmidl, Christian, Suzuki, Takahiro, Ntini, Evgenia, Arner, Erik, Valen, Eivind, Li, Kang, Schwarzfischer, Lucia, Glatz, Dagmar, Raithel, Johanna, Lilje, Berit, Rapin, Nicolas, Bagger, Frederik Otzen, Jørgensen, Mette, Andersen, Peter Refsing, Bertin, Nicolas, Rackham, Owen, Burroughs, A. Maxwell, Baillie, J. Kenneth, Ishizu, Yuri, Shimizu, Yuri, Furuhata, Erina, Maeda, Shiori, Negishi, Yutaka, Mungall, Christopher J., Meehan, Terrence F., Lassmann, Timo, Itoh, Masayoshi, Kawaji, Hideya, Kondo, Naoto, Kawai, Jun, Lennartsson, Andreas, Daub, Carsten O., Heutink, Peter, Hume, David A., Jensen, Torben Heick, Suzuki, Harukazu, Hayashizaki, Yoshihide, Müller, Ferenc, Forrest, Alistair R. R., Carninci, Piero, Rehli, Michael, Sandelin, Albin

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Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation von Morikawa, Hiromasa, Ohkura, Naganari, Vandenbon, Alexis, Itoh, Masayoshi, Nagao-Sato, Sayaka, Kawaji, Hideya, Lassmann, Timo, Carninci, Piero, Hayashizaki, Yoshihide, Forrest, Alistair R. R., Standley, Daron M., Date, Hiroshi, Sakaguchi, Shimon

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A Natural Encoding of Genetic Variation in a Burrows-Wheeler Transform to Enable Mapping and Genome Inference von Maciuca, Sorina, del Ojo Elias, Carlos, McVean, Gil, Iqbal, Zamin

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Better Identification of Repeats in Metagenomic Scaffolding von Ghurye, Jay, Pop, Mihai

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Ceruloplasmin is a novel adipokine which is overexpressed in adipose tissue of obese subjects and in obesity-associated cancer cells von Arner, Erik, Forrest, Alistair R R, Ehrlund, Anna, Mejhert, Niklas, Itoh, Masayoshi, Kawaji, Hideya, Lassmann, Timo, Laurencikiene, Jurga, Rydén, Mikael, Arner, Peter

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SpecTrees: An Efficient Without a Priori Data Structure for MS/MS Spectra Identification von David, Matthieu, Fertin, Guillaume, Tessier, Dominique

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Compact Universal k-mer Hitting Sets von Orenstein, Yaron, Pellow, David, Marçais, Guillaume, Shamir, Ron, Kingsford, Carl

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The statistical geometry of transcriptome divergence in cell-type evolution and cancer von Liang, Cong, Forrest, Alistair R.R., Wagner, Günter P.

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Discovery of molecular markers to discriminate corneal endothelial cells in the human body von Yoshihara, Masahito, Ohmiya, Hiroko, Hara, Susumu, Kawasaki, Satoshi, Hayashizaki, Yoshihide, Itoh, Masayoshi, Kawaji, Hideya, Tsujikawa, Motokazu, Nishida, Kohji

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The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome von Hurst, Laurence D, Ghanbarian, Avazeh T, Forrest, Alistair R R, Huminiecki, Lukasz

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Correction of Weighted Orthology and Paralogy Relations - Complexity and Algorithmic Results von Dondi, Riccardo, El-Mabrouk, Nadia, Lafond, Manuel

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Copy-Number Evolution Problems: Complexity and Algorithms von El-Kebir, Mohammed, Raphael, Benjamin J., Shamir, Ron, Sharan, Roded, Zaccaria, Simone, Zehavi, Meirav, Zeira, Ron

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Solving Generalized Maximum-Weight Connected Subgraph Problem for Network Enrichment Analysis von Loboda, Alexander A., Artyomov, Maxim N., Sergushichev, Alexey A.

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A Graph Extension of the Positional Burrows-Wheeler Transform and Its Applications von Novak, Adam M., Garrison, Erik, Paten, Benedict

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Further Improvement in Approximating the Maximum Duo-Preservation String Mapping Problem von Brubach, Brian

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CCL2 enhances pluripotency of human induced pluripotent stem cells by activating hypoxia related genes von Hasegawa, Yuki, Tang, Dave, Takahashi, Naoko, Hayashizaki, Yoshihide, Forrest, Alistair R. R., the FANTOM consortium, Suzuki, Harukazu

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An Efficient Branch and Cut Algorithm to Find Frequently Mutated Subnetworks in Cancer von Bomersbach, Anna, Chiarandini, Marco, Vandin, Fabio

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Application of Gene Expression Trajectories Initiated from ErbB Receptor Activation Highlights the Dynamics of Divergent Promoter Usage von Carbajo, Daniel, Magi, Shigeyuki, Itoh, Masayoshi, Kawaji, Hideya, Lassmann, Timo, Arner, Erik, Forrest, Alistair R R, Carninci, Piero, Hayashizaki, Yoshihide, Daub, Carsten O, Okada-Hatakeyama, Mariko, Mar, Jessica C

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Independent Component Analysis to Remove Batch Effects from Merged Microarray Datasets von Renard, Emilie, Branders, Samuel, Absil, P.-A.

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