SARS-CoV-2 infection induces the dedifferentiation of multiciliated cells and impairs mucociliary clearance von Robinot, Rémy, Hubert, Mathieu, de Melo, Guilherme Dias, Lazarini, Françoise, Bruel, Timothée, Smith, Nikaïa, Levallois, Sylvain, Larrous, Florence, Fernandes, Julien, Gellenoncourt, Stacy, Rigaud, Stéphane, Gorgette, Olivier, Thouvenot, Catherine, Trébeau, Céline, Mallet, Adeline, Duménil, Guillaume, Gobaa, Samy, Etournay, Raphaël, Lledo, Pierre-Marie, Lecuit, Marc, Bourhy, Hervé, Duffy, Darragh, Michel, Vincent, Schwartz, Olivier, Chakrabarti, Lisa A.

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TissueMiner: A multiscale analysis toolkit to quantify how cellular processes create tissue dynamics von Etournay, Raphaël, Merkel, Matthias, Popović, Marko, Brandl, Holger, Dye, Natalie A, Aigouy, Benoît, Salbreux, Guillaume, Eaton, Suzanne, Jülicher, Frank

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Interplay of cell dynamics and epithelial tension during morphogenesis of the Drosophila pupal wing von Etournay, Raphaël, Popović, Marko, Merkel, Matthias, Nandi, Amitabha, Blasse, Corinna, Aigouy, Benoît, Brandl, Holger, Myers, Gene, Salbreux, Guillaume, Jülicher, Frank, Eaton, Suzanne

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Cell dynamics underlying oriented growth of the Drosophila wing imaginal disc von Dye, Natalie A, Popović, Marko, Spannl, Stephanie, Etournay, Raphaël, Kainmüller, Dagmar, Ghosh, Suhrid, Myers, Eugene W, Jülicher, Frank, Eaton, Suzanne

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Active dynamics of tissue shear flow von Popovi, Marko, Nandi, Amitabha, Merkel, Matthias, Etournay, Raphaël, Eaton, Suzanne, Jülicher, Frank, Salbreux, Guillaume

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In utero adeno-associated virus (AAV)-mediated gene delivery targeting sensory and supporting cells in the embryonic mouse inner ear von Barbosa Spinola, Carla Maria, Boutet de Monvel, Jacques, Safieddine, Saaid, Lahlou, Ghizlène, Etournay, Raphaël

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Extracting multiple surfaces from 3D microscopy images in complex biological tissues with the Zellige software tool von Trébeau, Céline, de Monvel, Jacques Boutet, Altay, Gizem, Tinevez, Jean-Yves, Etournay, Raphaël

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PreMosa: extracting 2D surfaces from 3D microscopy mosaics von Blasse, Corinna, Saalfeld, Stephan, Etournay, Raphaël, Sagner, Andreas, Eaton, Suzanne, Myers, Eugene W

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DNABarcodeCompatibility: an R-package for optimizing DNA-barcode combinations in multiplex sequencing experiments von Trébeau, Céline, Boutet de Monvel, Jacques, Wong Jun Tai, Fabienne, Petit, Christine, Etournay, Raphaël

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Triangles bridge the scales: Quantifying cellular contributions to tissue deformation von Merkel, Matthias, Etournay, Raphaël, Popović, Marko, Salbreux, Guillaume, Eaton, Suzanne, Jülicher, Frank

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Shroom2, a myosin-VIIa- and actin-binding protein, directly interacts with ZO-1 at tight junctions von Etournay, Raphaël, Zwaenepoel, Ingrid, Perfettini, Isabelle, Legrain, Pierre, Petit, Christine, El-Amraoui, Aziz

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Cochlear outer hair cells undergo an apical circumference remodeling constrained by the hair bundle shape von Etournay, Raphaël, Lepelletier, Léa, Boutet de Monvel, Jacques, Michel, Vincent, Cayet, Nadège, Leibovici, Michel, Weil, Dominique, Foucher, Isabelle, Hardelin, Jean-Pierre, Petit, Christine

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PHR1, an integral membrane protein of the inner ear sensory cells, directly interacts with myosin 1c and myosin VIIa von Etournay, Raphae̊l, El-Amraoui, Aziz, Bahloul, Amel, Blanchard, Stéphane, Roux, Isabelle, Pézeron, Guillaume, Michalski, Nicolas, Daviet, Laurent, Hardelin, Jean-Pierre, Legrain, Pierre, Petit, Christine

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In utero adeno-associated virus von Barbosa Spinola, Carla Maria, Boutet de Monvel, Jacques, Safieddine, Saaid, Lahlou, Ghizlène, Etournay, Raphaël

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In utero adeno-associated virus (AAV)-mediated gene delivery targeting sensory and supporting cells in the embryonic mouse inner ear von Barbosa Spinola, Carla Maria, Boutet de Monvel, Jacques, Safieddine, Saaid, Lahlou, Ghizlène, Etournay, Raphaël

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SCRIB controls apical contractility during epithelial differentiation von Boëda, Batiste, Michel, Vincent, Etournay, Raphael, England, Patrick, Rigaud, Stéphane, Mary, Héloïse, Gobaa, Samy, Etienne-Manneville, Sandrine

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The Balance of Prickle/Spiny-Legs Isoforms Controls the Amount of Coupling between Core and Fat PCP Systems von Merkel, Matthias, Sagner, Andreas, Gruber, Franz Sebastian, Etournay, Raphael, Blasse, Corinna, Myers, Eugene, Eaton, Suzanne, Jülicher, Frank

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Caresser la polarité planaire dans le sens du flot von Aigouy, Benoît, Etournay, Raphaël, Sagner, Andreas, Staple, Douglas B., Farhadifar, Reza, Röper, Jens-Christian, Eaton, Suzanne, Jülicher, Frank

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Cell flow reorients planar polarity in the wing of Drosophila von Aigouy, Benoît, Etournay, Raphaël, Sagner, Andreas, Staple, Douglas B, Farhadifar, Reza, Röper, Jens-Christian, Eaton, Suzanne, Jülicher, Frank

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Additional file 1 of Extracting multiple surfaces from 3D microscopy images in complex biological tissues with the Zellige software tool von Trébeau, Céline, de Monvel, Jacques Boutet, Altay, Gizem, Tinevez, Jean-Yves, Etournay, Raphaël

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