Spatial deconvolution of HER2-positive breast cancer delineates tumor-associated cell type interactions von Andersson, Alma, Larsson, Ludvig, Stenbeck, Linnea, Salmén, Fredrik, Ehinger, Anna, Wu, Sunny Z., Al-Eryani, Ghamdan, Roden, Daniel, Swarbrick, Alex, Borg, Åke, Frisén, Jonas, Engblom, Camilla, Lundeberg, Joakim

Volltext

Stromal cell diversity associated with immune evasion in human triple‐negative breast cancer von Wu, Sunny Z, Roden, Daniel L, Wang, Chenfei, Holliday, Holly, Harvey, Kate, Cazet, Aurélie S, Murphy, Kendelle J, Pereira, Brooke, Al‐Eryani, Ghamdan, Bartonicek, Nenad, Hou, Rui, Torpy, James R, Junankar, Simon, Chan, Chia‐Ling, Lam, Chuan En, Hui, Mun N, Gluch, Laurence, Beith, Jane, Parker, Andrew, Robbins, Elizabeth, Segara, Davendra, Mak, Cindy, Cooper, Caroline, Warrier, Sanjay, Forrest, Alistair, Powell, Joseph, O'Toole, Sandra, Cox, Thomas R, Timpson, Paul, Lim, Elgene, Liu, X Shirley, Swarbrick, Alexander

Volltext

Cross-tissue single-cell landscape of human monocytes and macrophages in health and disease von Mulder, Kevin, Patel, Amit Ashok, Kong, Wan Ting, Piot, Cécile, Halitzki, Evelyn, Dunsmore, Garett, Khalilnezhad, Shabnam, Irac, Sergio Erdal, Dubuisson, Agathe, Chevrier, Marion, Zhang, Xiao Meng, Tam, John Kit Chung, Lim, Tony Kiat Hon, Wong, Regina Men Men, Pai, Rhea, Khalil, Ahmed Ibrahim Samir, Chow, Pierce Kah Hoe, Wu, Suny Z., Al-Eryani, Ghamdan, Roden, Daniel, Swarbrick, Alexander, Chan, Jerry Kok Yen, Albani, Salvatore, Derosa, Lisa, Zitvogel, Laurence, Sharma, Ankur, Chen, Jinmiao, Silvin, Aymeric, Bertoletti, Antonio, Blériot, Camille, Dutertre, Charles-Antoine, Ginhoux, Florent

Volltext

High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes von Singh, Mandeep, Al-Eryani, Ghamdan, Carswell, Shaun, Ferguson, James M., Blackburn, James, Barton, Kirston, Roden, Daniel, Luciani, Fabio, Giang Phan, Tri, Junankar, Simon, Jackson, Katherine, Goodnow, Christopher C., Smith, Martin A., Swarbrick, Alexander

Volltext

Performance of tumour microenvironment deconvolution methods in breast cancer using single-cell simulated bulk mixtures von Tran, Khoa A., Addala, Venkateswar, Johnston, Rebecca L., Lovell, David, Bradley, Andrew, Koufariotis, Lambros T., Wood, Scott, Wu, Sunny Z., Roden, Daniel, Al-Eryani, Ghamdan, Swarbrick, Alexander, Williams, Elizabeth D., Pearson, John V., Kondrashova, Olga, Waddell, Nicola

Volltext

DNA barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and immunotherapy response von Baldwin, Louise A., Bartonicek, Nenad, Yang, Jessica, Wu, Sunny Z., Deng, Niantao, Roden, Daniel L., Chan, Chia-Ling, Al-Eryani, Ghamdan, Zanker, Damien J., Parker, Belinda S., Swarbrick, Alexander, Junankar, Simon

Volltext

Cryopreservation of human cancers conserves tumour heterogeneity for single-cell multi-omics analysis von Wu, Sunny Z, Roden, Daniel L, Al-Eryani, Ghamdan, Bartonicek, Nenad, Harvey, Kate, Cazet, Aurélie S, Chan, Chia-Ling, Junankar, Simon, Hui, Mun N, Millar, Ewan A, Beretov, Julia, Horvath, Lisa, Joshua, Anthony M, Stricker, Phillip, Wilmott, James S, Quek, Camelia, Long, Georgina V, Scolyer, Richard A, Yeung, Bertrand Z, Segara, Davendra, Mak, Cindy, Warrier, Sanjay, Powell, Joseph E, O'Toole, Sandra, Lim, Elgene, Swarbrick, Alexander

Volltext

Spatial maps of genetically diverse breast cancer cells von Al-Eryani, Ghamdan, Swarbrick, Alexander

Volltext

snPATHO-seq, a versatile FFPE single-nucleus RNA sequencing method to unlock pathology archives von Wang, Taopeng, Roach, Michael J., Harvey, Kate, Morlanes, Javier Escudero, Kiedik, Beata, Al-Eryani, Ghamdan, Greenwald, Alissa, Kalavros, Nikolaos, Dezem, Felipe Segato, Ma, Yuling, Pita-Juarez, Yered H., Wise, Kellie, Degletagne, Cyril, Elz, Anna, Hadadianpour, Azi, Johanneson, Jack, Pakiam, Fiona, Ryu, Heeju, Newell, Evan W., Tonon, Laurie, Kohlway, Andrew, Drennon, Tingsheng, Abousoud, Jawad, Stott, Ryan, Lund, Paul, Durruthy, Jens, Vallejo, Andres F., Li, Wenyan, Salomon, Robert, Kaczorowski, Dominik, Warren, Joanna, Butler, Lisa M., O’Toole, Sandra, Plummer, Jasmine, Vlachos, Ioannis S., Lundeberg, Joakim, Swarbrick, Alexander, Martelotto, Luciano G.

Volltext

A single-cell and spatially resolved atlas of human breast cancers von Wu, Sunny Z., Al-Eryani, Ghamdan, Roden, Daniel Lee, Junankar, Simon, Harvey, Kate, Andersson, Alma, Thennavan, Aatish, Wang, Chenfei, Torpy, James R., Bartonicek, Nenad, Wang, Taopeng, Larsson, Ludvig, Kaczorowski, Dominik, Weisenfeld, Neil I., Uytingco, Cedric R., Chew, Jennifer G., Bent, Zachary W., Chan, Chia-Ling, Gnanasambandapillai, Vikkitharan, Dutertre, Charles-Antoine, Gluch, Laurence, Hui, Mun N., Beith, Jane, Parker, Andrew, Robbins, Elizabeth, Segara, Davendra, Cooper, Caroline, Mak, Cindy, Chan, Belinda, Warrier, Sanjay, Ginhoux, Florent, Millar, Ewan, Powell, Joseph E., Williams, Stephen R., Liu, X. Shirley, O’Toole, Sandra, Lim, Elgene, Lundeberg, Joakim, Perou, Charles M., Swarbrick, Alexander

Volltext

Reversal of Lactate and PD-1-mediated Macrophage Immunosuppression Controls Growth of PTEN/p53-deficient Prostate Cancer von Chaudagar, Kiranj, Hieromnimon, Hanna M, Khurana, Rimpi, Labadie, Brian, Hirz, Taghreed, Mei, Shenglin, Hasan, Raisa, Shafran, Jordan, Kelley, Anne, Apostolov, Eva, Al-Eryani, Ghamdan, Harvey, Kate, Rameshbabu, Srikrishnan, Loyd, Mayme, Bynoe, Kaela, Drovetsky, Catherine, Solanki, Ani, Markiewicz, Erica, Zamora, Marta, Fan, Xiaobing, Schürer, Stephan, Swarbrick, Alex, Sykes, David B, Patnaik, Akash

Volltext

Standardized practices for RNA diagnostics using clinically accessible specimens reclassifies 75% of putative splicing variants von Bommireddipalli, Shobhana, Ades, Lesley, Archibald, Alison D., Berman, Yemima, Bojadzieva, Jasmina, Brown, Natasha J., Bryen, Samantha J., Engel, Amanda, Ewans, Lisa J., Fennell, Andrew, Freckmann, Mary-Louise, Gear, Russell, Goel, Himanshu, Goh, Shuxiang, Harraway, James, Higgins, Megan, Ho, Gladys, Hunter, Matthew F., Joshi, Himanshu, Krzesinski, Emma, Leventer, Richard J., Macaskill, Steven, McCarthy, Hugh J., McLean, Alison, Patel, Chirag, Regan, Matthew, Schindler, Tim, Tantsis, Esther, Tchan, Michel C., van Spaendonck-Zwarts, Karin, White, Susan M., Williams, Mark G., Wright, Dale C., Yap, Patrick, Yeung, Alison, Jones, Kristi J., Cooper, Sandra T., Arts, Peer, Barnett, Christopher, Beshay, Victoria, Blombery, Piers, Boggs, Kirsten, Branford, Susan, Bryen, Samantha J., Canson, Daffodil, Chew, Edward, Chong, Belinda, Chung, Seo-Kyung, Clark, Mike, Compton, Alison, Corbett, Mark, Davis, Mark R., Dudding, Tracy, Ewans, Lisa J., Eyras, Eduardo, Fellowes, Andrew, Field, Michael, Freckmann, Mary-Louise, Gaff, Clara, Galea, Melanie, Hanna, Bernadette, Harraway, James, Hayashi, Rippei, Henderson, Alex, Jackson, Matilda, Jones, Kristi J., Wong, Justin Jong-Leong, Joshi, Himanshu, Krzesinski, Emma, Kumble, Smitha, Laing, Nigel, Lau, Chiyan, Lee, Eric, Lundie, Ben, Mallawaarachchi, Amali, McLean, Alison, Meldrum, Cliff, Mina, Kym, Mowat, David, Oshlack, Alicia, Parsons, Michael, Patel, Chirag, Pinner, Jason R., Quinn, Michael, Ravenscroft, Gina, Regan, Matthew, Ronan, Anne, Sadedin, Simon, Schreiber, Andreas, Scott, Rodney, Simons, Cas, Smyth, Renee, Thompson, Bryony A., Thorburn, David, Trent, Ronald, Tudini, Emma, Wallis, Mathew, Wilson, Meredith J., Winship, Ingrid, Yeung, Alison

Volltext

Spatial deconvolution of HER2-positive breast cancer delineates tumor-associated cell type interactions von Andersson, Alma, Larsson, Ludvig, Stenbeck, Linnea, Salmén, Fredrik, Ehinger, Anna, Wu, Sunny Z, Al-Eryani, Ghamdan, Roden, Daniel, Swarbrick, Alex, Borg, Åke, Frisén, Jonas, Engblom, Camilla, Lundeberg, Joakim

Volltext

STAT3 gain-of-function mutations connect leukemia with autoimmune disease by pathological NKG2Dhi CD8+ T cell dysregulation and accumulation von Masle-Farquhar, Etienne, Jackson, Katherine J.L., Peters, Timothy J., Al-Eryani, Ghamdan, Singh, Mandeep, Payne, Kathryn J., Rao, Geetha, Avery, Danielle T., Apps, Gabrielle, Kingham, Jennifer, Jara, Christopher J., Skvortsova, Ksenia, Swarbrick, Alexander, Ma, Cindy S., Suan, Daniel, Uzel, Gulbu, Chua, Ignatius, Leiding, Jennifer W., Heiskanen, Kaarina, Preece, Kahn, Kainulainen, Leena, O’Sullivan, Michael, Cooper, Megan A., Seppänen, Mikko R.J., Mustjoki, Satu, Brothers, Shannon, Vogel, Tiphanie P., Brink, Robert, Tangye, Stuart G., Reed, Joanne H., Goodnow, Christopher C.

Volltext

Abstract P1-04-04: Dna barcoding reveals ongoing immunoediting of clonal cancer populations during metastatic progression and in response to immunotherapy von Baldwin, Louise A, Bartonicek, Nenad, Yang, Jessica, Wu, Sunny Z, Deng, Niantao, Roden, Daniel, Chan, Chia-Ling, Al-Eryani, Ghamdan, Zanker, Damien J, Parker, Belinda S, Swarbrick, Alexander, Junankar, Simon

Volltext

A triad of somatic mutagenesis converges in self-reactive B cells to cause a virus-induced autoimmune disease von Young, Clara, Singh, Mandeep, Jackson, Katherine J L, Field, Matt A, Peters, Timothy J, Angioletti-Uberti, Stefano, Frenkel, Daan, Ravishankar, Shyamsundar, Gupta, Money, Wang, Jing J, Agapiou, David, Faulks, Megan L, Al-Eryani, Ghamdan, Luciani, Fabio, Gordon, Tom P, Reed, Joanne H, Danta, Mark, Carr, Andrew, Kelleher, Anthony D, Dore, Gregory J, Matthews, Gail, Brink, Robert, Bull, Rowena A, Suan, Dan, Goodnow, Christopher C

Volltext

The effects of germline STAT3-activating mutations from autoimmunity and lymphoid malignancy on mouse and human T cells von Masle-Farquhar, Etienne, Payne, Kathryn, Singh, Mandeep, Rao, Geetha, Al-Eryani, Ghamdan, Jara, Christopher, Jackson, Katherine, Brink, Robert Adrian, Tangye, Stuart, Reed, Joanne, Goodnow, Christopher C

Volltext

Abstract 129: An integrated multi-omic cellular atlas of human breast cancers von Wu, Sunny Z., Roden, Daniel, Eryani, Ghamdan Al, Junankar, Simon, Lim, Elgene, Thennavan, Aatish, Andersson, Alma, Williams, Stephen, Gong, Jingjing, Fropf, Robin, Fuhrman, Kit, Lundeberg, Joakim, Perou, Chuck, Swarbrick, Alexander

Volltext

An integrated multi-omic cellular atlas of human breast cancers von Wu, Sunny Z., Roden, Daniel, Al Eryani, Ghamdan, Junankar, Simon, Lim, Elgene, Thennavan, Aatish, Andersson, Alma, Williams, Stephen, Gong, Jingjing, Fropf, Robin, Fuhrman, Kit, Lundeberg, Joakim, Perou, Chuck, Swarbrick, Alexander

Volltext

Using single cell genomics to change the treatment of lung cancer von Chin, Venessa T., Al Eryani, Ghamdan, McCloy, Rachael, Stone, Emily, Havryk, Adrian, Plit, Marshall, Field, Andrew, Watkins, Neil, Swarbrick, Alex, Powell, Joseph

Volltext