The parallelism motifs of genomic data analysis von Yelick, Katherine, Buluc, Aydin, Awan, Muaaz, Azad, Ariful, Brock, Benjamin, Egan, Rob, Ekanayake, Saliya, Ellis, Marquita, Georganas, Evangelos, Guidi, Giulia, Hofmeyr, Steven, Selvitopi, Oguz, Teodoropol, Cristina, Oliker, Leonid

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The parallelism motifs of genomic data analysis von Yelick, Katherine, Buluç, Aydın, Awan, Muaaz, Azad, Ariful, Brock, Benjamin, Egan, Rob, Ekanayake, Saliya, Ellis, Marquita, Georganas, Evangelos, Guidi, Giulia, Hofmeyr, Steven, Selvitopi, Oguz, Teodoropol, Cristina, Oliker, Leonid

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Automated Data Management and Learning-Based Scheduling for Ray-Based Hybrid HPC-Cloud Systems von Liu, Tingkai, Tao, Huili, Lu, Yicheng, Zhu, Zhongbo, Ellis, Marquita, Kokkila-Schumacher, Sara, Kindratenko, Volodymyr

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Cloud-Bursting and Autoscaling for Python-Native Scientific Workflows Using Ray von Liu, Tingkai, Ellis, Marquita, Costa, Carlos, Misale, Claudia, Kokkila-Schumacher, Sara, Jung, Jinwook, Nam, Gi-Joon, Kindratenko, Volodymyr

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Performance Characterization of De Novo Genome Assembly on Leading Parallel Systems von Ellis, Marquita, Georganas, Evangelos, Egan, Rob, Hofmeyr, Steven, Buluç, Aydın, Cook, Brandon, Oliker, Leonid, Yelick, Katherine

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diBELLA: Distributed Long Read to Long Read Alignment von Ellis, Marquita, Guidi, Giulia, Buluç, Aydın, Oliker, Leonid, Yelick, Katherine

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10 Years Later: Cloud Computing is Closing the Performance Gap von Guidi, Giulia, Ellis, Marquita, Aydin Buluc, Yelick, Katherine, Culler, David

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Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly von Guidi, Giulia, Selvitopi, Oguz, Ellis, Marquita, Oliker, Leonid, Yelick, Katherine, Buluc, Aydin

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ALLOCATING COMPUTING RESOURCES USING A MACHINE LEARNING MODEL von Ellis, Marquita May, Malvankar, Abhishek, Arroyo, Diana Jeanne, Youssef, Alaa S, Wang, Chen

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LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment von Zeni, Alberto, Guidi, Giulia, Ellis, Marquita, Ding, Nan, Santambrogio, Marco D, Hofmeyr, Steven, Buluç, Aydın, Oliker, Leonid, Yelick, Katherine

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The Parallelism Motifs of Genomic Data Analysis von Yelick, Katherine, Aydin Buluc, Awan, Muaaz, Azad, Ariful, Brock, Benjamin, Egan, Rob, Ekanayake, Saliya, Ellis, Marquita, Georganas, Evangelos, Guidi, Giulia, Hofmeyr, Steven, Selvitopi, Oguz, Teodoropol, Cristina, Oliker, Leonid

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Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly von Guidi, Giulia, Selvitopi, Oguz, Ellis, Marquita, Oliker, Leonid, Yelick, Katherine, Aydin Buluc

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LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment von Zeni, Alberto, Guidi, Giulia, Ellis, Marquita, Ding, Nan, Santambrogio, Marco D, Hofmeyr, Steven, Buluç, Aydın, Oliker, Leonid, Yelick, Katherine

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Using Large Scale Language Models for Enabling NLP Abilities Within Earth Sciences von Ramasubramanian, Muthukumaran, Gurung, Iksha, Ganti, Raghu, Bhattacharya, Bishwaranjan, Wertheimer, Davis, Ellis, Marquita, Maskey, Manil, Ramachandran, Rahul

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