Recognition of white matter bundles using local and global streamline-based registration and clustering von Garyfallidis, Eleftherios, Côté, Marc-Alexandre, Rheault, Francois, Sidhu, Jasmeen, Hau, Janice, Petit, Laurent, Fortin, David, Cunanne, Stephen, Descoteaux, Maxime

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What’s new and what’s next in diffusion MRI preprocessing von Tax, Chantal M.W., Bastiani, Matteo, Veraart, Jelle, Garyfallidis, Eleftherios, Okan Irfanoglu, M.

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Dipy, a library for the analysis of diffusion MRI data von Garyfallidis, Eleftherios, Brett, Matthew, Amirbekian, Bagrat, Rokem, Ariel, van der Walt, Stefan, Descoteaux, Maxime, Nimmo-Smith, Ian

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Tractometer: Towards validation of tractography pipelines von Côté, Marc-Alexandre, Girard, Gabriel, Boré, Arnaud, Garyfallidis, Eleftherios, Houde, Jean-Christophe, Descoteaux, Maxime

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Bundle analytics, a computational framework for investigating the shapes and profiles of brain pathways across populations von Chandio, Bramsh Qamar, Risacher, Shannon Leigh, Pestilli, Franco, Bullock, Daniel, Yeh, Fang-Cheng, Koudoro, Serge, Rokem, Ariel, Harezlak, Jaroslaw, Garyfallidis, Eleftherios

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The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services von Avesani, Paolo, McPherson, Brent, Hayashi, Soichi, Caiafa, Cesar F., Henschel, Robert, Garyfallidis, Eleftherios, Kitchell, Lindsey, Bullock, Daniel, Patterson, Andrew, Olivetti, Emanuele, Sporns, Olaf, Saykin, Andrew J., Wang, Lei, Dinov, Ivo, Hancock, David, Caron, Bradley, Qian, Yiming, Pestilli, Franco

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Diffusional Kurtosis Imaging in the Diffusion Imaging in Python Project von Henriques, Rafael Neto, Correia, Marta M, Marrale, Maurizio, Huber, Elizabeth, Kruper, John, Koudoro, Serge, Yeatman, Jason D, Garyfallidis, Eleftherios, Rokem, Ariel

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Multi-scale V-net architecture with deep feature CRF layers for brain extraction von Park, Jong Sung, Fadnavis, Shreyas, Garyfallidis, Eleftherios

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Quantitative Comparison of Reconstruction Methods for Intra-Voxel Fiber Recovery From Diffusion MRI von Daducci, Alessandro, Canales-Rodriguez, Erick Jorge, Descoteaux, Maxime, Garyfallidis, Eleftherios, Gur, Yaniv, Ying-Chia Lin, Mani, Merry, Merlet, Sylvain, Paquette, Michael, Ramirez-Manzanares, Alonso, Reisert, Marco, Reis Rodrigues, Paulo, Sepehrband, Farshid, Caruyer, Emmanuel, Choupan, Jeiran, Deriche, Rachid, Jacob, Mathews, Menegaz, Gloria, Prckovska, Vesna, Rivera, Mariano, Wiaux, Yves, Thiran, Jean-Philippe

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A test-retest study on Parkinson's PPMI dataset yields statistically significant white matter fascicles von Cousineau, Martin, Jodoin, Pierre-Marc, Morency, Félix C, Rozanski, Verena, Grand'Maison, Marilyn, Bedell, Barry J, Descoteaux, Maxime

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Denoising of diffusion MRI in the cervical spinal cord – effects of denoising strategy and acquisition on intra-cord contrast, signal modeling, and feature conspicuity von Schilling, Kurt G., Fadnavis, Shreyas, Batson, Joshua, Visagie, Mereze, Combes, Anna J.E., By, Samantha, McKnight, Colin D., Bagnato, Francesca, Garyfallidis, Eleftherios, Landman, Bennett A., Smith, Seth A., O'Grady, Kristin P.

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Semi-Automatic Segmentation of Optic Radiations and LGN, and Their Relationship to EEG Alpha Waves von Renauld, Emmanuelle, Descoteaux, Maxime, Bernier, Michaël, Garyfallidis, Eleftherios, Whittingstall, Kevin

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Bifurcated Topological Optimization for IVIM von Fadnavis, Shreyas, Endres, Stefan, Wen, Qiuting, Wu, Yu-Chien, Cheng, Hu, Koudoro, Serge, Rane, Swati, Rokem, Ariel, Garyfallidis, Eleftherios

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Pandora: 4-D White Matter Bundle Population-Based Atlases Derived from Diffusion MRI Fiber Tractography von Hansen, Colin B, Yang, Qi, Lyu, Ilwoo, Rheault, Francois, Kerley, Cailey, Chandio, Bramsh Qamar, Fadnavis, Shreyas, Williams, Owen, Shafer, Andrea T., Resnick, Susan M., Zald, David H., Cutting, Laurie E, Taylor, Warren D, Boyd, Brian, Garyfallidis, Eleftherios, Anderson, Adam W, Descoteaux, Maxime, Landman, Bennett A, Schilling, Kurt G

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Identifying Vulnerable Brain Networks in Mouse Models of Genetic Risk Factors for Late Onset Alzheimer's Disease von Badea, Alexandra, Wu, Wenlin, Shuff, Jordan, Wang, Michele, Anderson, Robert J, Qi, Yi, Johnson, G Allan, Wilson, Joan G, Koudoro, Serge, Garyfallidis, Eleftherios, Colton, Carol A, Dunson, David B

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Extracting biomarkers of autism from MEG resting-state functional connectivity networks von Tsiaras, Vassilis, Simos, Panagiotis G, Rezaie, Roozbeh, Sheth, Bhavin R, Garyfallidis, Eleftherios, Castillo, Eduardo M, Papanicolaou, Andrew C

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The sensitivity of diffusion MRI to microstructural properties and experimental factors von Afzali, Maryam, Pieciak, Tomasz, Newman, Sharlene, Garyfallidis, Eleftherios, Özarslan, Evren, Cheng, Hu, Jones, Derek K

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Robust and efficient linear registration of white-matter fascicles in the space of streamlines von Garyfallidis, Eleftherios, Ocegueda, Omar, Wassermann, Demian, Descoteaux, Maxime

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Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset? von Petit, Laurent, Hansen, Colin B., Yeh, Fang-Cheng, Barakovic, Muhamed, Rafael-Patino, Jonathan, Fischi-Gomez, Elda, Pizzolato, Marco, Ocampo-Pineda, Mario, Schiavi, Simona, Canales-Rodríguez, Erick J., Daducci, Alessandro, Granziera, Cristina, Innocenti, Giorgio, Thiran, Jean-Philippe, Wastling, Stephen, Cocozza, Sirio, Petracca, Maria, Vakharia, Vejay N., Melero, Helena, Manzanedo, Lidia, Sanz-Morales, Emilio, Peña-Melián, Ángel, Calamante, Fernando, Attyé, Arnaud, Korobova, Laura, Toga, Arthur W., Vijayakumari, Anupa Ambili, Parker, Drew, Verma, Ragini, Radwan, Ahmed, Emsell, Louise, De Luca, Alberto, Leemans, Alexander, Haroon, Hamied, Azadbakht, Hojjatollah, Yeh, Ping-Hong, Chen, Jian, Kelly, Claire E., Yeh, Chun-Hung, Maller, Jerome J., Almairac, Fabien, Seunarine, Kiran K, Zhang, Fan, Makris, Nikos, Golby, Alexandra, Rathi, Yogesh, O'Donnell, Lauren J., Xia, Yihao, Aydogan, Dogu Baran, Fernandes, Francisco Guerreiro, Warrington, Shaun, Michielse, Stijn, Concha, Luis, Aranda, Ramón, Meraz, Mariano Rivera, Lerma-Usabiaga, Garikoitz, Roitman, Lucas, Fekonja, Lucius S., Calarco, Navona, Joseph, Michael, Nakua, Hajer, Voineskos, Aristotle N., Legarreta, Jon Haitz, Adluru, Nagesh, Prabhakaran, Vivek, Alexander, Andrew L., Uchida, Wataru, Abe, Masahiro, Bayrak, Roza G., Wheeler-Kingshott, Claudia A.M. Gandini, D'Angelo, Egidio, Palesi, Fulvia, Savini, Giovanni, Rolandi, Nicolò, Guevara, Pamela, Houenou, Josselin, López-López, Narciso, Mangin, Jean-François, Poupon, Cyril, Maffei, Chiara, Arantes, Mavilde, Andrade, José Paulo, Silva, Susana Maria, Calhoun, Vince D., Caverzasi, Eduardo, Sacco, Simone, Lauricella, Michael, Pestilli, Franco, Zhan, Yang, Brignoni-Perez, Edith, Nestrasil, Igor, Labounek, René, Lenglet, Christophe, Aulicka, Stefania, Heilbronner, Sarah R., Chandio, Bramsh Qamar, Guaje, Javier, Garyfallidis, Eleftherios, Anderson, Adam W., Landman, Bennett A.

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The challenge of mapping the human connectome based on diffusion tractography von Maier-Hein, Klaus H., Neher, Peter F., Houde, Jean-Christophe, Côté, Marc-Alexandre, Garyfallidis, Eleftherios, Zhong, Jidan, Chamberland, Maxime, Yeh, Fang-Cheng, Lin, Ying-Chia, Ji, Qing, Reddick, Wilburn E., Glass, John O., Chen, David Qixiang, Feng, Yuanjing, Gao, Chengfeng, Wu, Ye, Ma, Jieyan, He, Renjie, Li, Qiang, Westin, Carl-Fredrik, Deslauriers-Gauthier, Samuel, González, J. Omar Ocegueda, Paquette, Michael, St-Jean, Samuel, Girard, Gabriel, Rheault, François, Sidhu, Jasmeen, Tax, Chantal M. W., Guo, Fenghua, Mesri, Hamed Y., Dávid, Szabolcs, Froeling, Martijn, Heemskerk, Anneriet M., Leemans, Alexander, Boré, Arnaud, Pinsard, Basile, Bedetti, Christophe, Desrosiers, Matthieu, Brambati, Simona, Doyon, Julien, Sarica, Alessia, Vasta, Roberta, Cerasa, Antonio, Quattrone, Aldo, Yeatman, Jason, Khan, Ali R., Hodges, Wes, Alexander, Simon, Romascano, David, Barakovic, Muhamed, Auría, Anna, Esteban, Oscar, Lemkaddem, Alia, Thiran, Jean-Philippe, Cetingul, H. Ertan, Odry, Benjamin L., Mailhe, Boris, Nadar, Mariappan S., Pizzagalli, Fabrizio, Prasad, Gautam, Villalon-Reina, Julio E., Galvis, Justin, Thompson, Paul M., Requejo, Francisco De Santiago, Laguna, Pedro Luque, Lacerda, Luis Miguel, Barrett, Rachel, Dell’Acqua, Flavio, Catani, Marco, Petit, Laurent, Caruyer, Emmanuel, Daducci, Alessandro, Dyrby, Tim B., Holland-Letz, Tim, Hilgetag, Claus C., Stieltjes, Bram, Descoteaux, Maxime

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