JARID1B Is a Luminal Lineage-Driving Oncogene in Breast Cancer von Yamamoto, Shoji, Wu, Zhenhua, Russnes, Hege G., Takagi, Shinji, Peluffo, Guillermo, Vaske, Charles, Zhao, Xi, Moen Vollan, Hans Kristian, Maruyama, Reo, Ekram, Muhammad B., Sun, Hanfei, Kim, Jee Hyun, Carver, Kristopher, Zucca, Mattia, Feng, Jianxing, Almendro, Vanessa, Bessarabova, Marina, Rueda, Oscar M., Nikolsky, Yuri, Caldas, Carlos, Liu, X. Shirley, Polyak, Kornelia

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Response and resistance to BET bromodomain inhibitors in triple-negative breast cancer von Shu, Shaokun, Lin, Charles Y., He, Housheng Hansen, Witwicki, Robert M., Tabassum, Doris P., Roberts, Justin M., Janiszewska, Michalina, Jin Huh, Sung, Liang, Yi, Ryan, Jeremy, Doherty, Ernest, Mohammed, Hisham, Guo, Hao, Stover, Daniel G., Ekram, Muhammad B., Peluffo, Guillermo, Brown, Jonathan, D’Santos, Clive, Krop, Ian E., Dillon, Deborah, McKeown, Michael, Ott, Christopher, Qi, Jun, Ni, Min, Rao, Prakash K., Duarte, Melissa, Wu, Shwu-Yuan, Chiang, Cheng-Ming, Anders, Lars, Young, Richard A., Winer, Eric P., Letai, Antony, Barry, William T., Carroll, Jason S., Long, Henry W., Brown, Myles, Shirley Liu, X., Meyer, Clifford A., Bradner, James E., Polyak, Kornelia

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High-throughput targeted repeat element bisulfite sequencing (HT-TREBS): genome-wide DNA methylation analysis of IAP LTR retrotransposon von Ekram, Muhammad B, Kim, Joomyeong

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Peg3 mutational effects on reproduction and placenta-specific gene families von Kim, Joomyeong, Frey, Wesley D, He, Hongzhi, Kim, Hana, Ekram, Muhammad B, Bakshi, Arundhati, Faisal, Mohammad, Perera, Bambarendage P U, Ye, An, Teruyama, Ryoichi

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Subclonal cooperation drives metastasis by modulating local and systemic immune microenvironments von Janiszewska, Michalina, Tabassum, Doris P., Castaño, Zafira, Cristea, Simona, Yamamoto, Kimiyo N., Kingston, Natalie L., Murphy, Katherine C., Shu, Shaokun, Harper, Nicholas W., Del Alcazar, Carlos Gil, Alečković, Maša, Ekram, Muhammad B., Cohen, Ofir, Kwak, Minsuk, Qin, Yuanbo, Laszewski, Tyler, Luoma, Adrienne, Marusyk, Andriy, Wucherpfennig, Kai W., Wagle, Nikhil, Fan, Rong, Michor, Franziska, McAllister, Sandra S., Polyak, Kornelia

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LSD1-Mediated Epigenetic Reprogramming Drives CENPE Expression and Prostate Cancer Progression von Liang, Yi, Ahmed, Musaddeque, Guo, Haiyang, Soares, Fraser, Hua, Junjie T, Gao, Shuai, Lu, Catherine, Poon, Christine, Han, Wanting, Langstein, Jens, Ekram, Muhammad B, Li, Brian, Davicioni, Elai, Takhar, Mandeep, Erho, Nicholas, Karnes, R Jeffrey, Chadwick, Dianne, van der Kwast, Theodorus, Boutros, Paul C, Arrowsmith, Cheryl H, Feng, Felix Y, Joshua, Anthony M, Zoubeidi, Amina, Cai, Changmeng, He, Housheng H

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High-Throughput Targeted Repeat Element Bisulfite Sequencing (HT-TREBS) von Bakshi, Arundhati, Ekram, Muhammad B., Kim, Joomyeong

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Deletion of Cdkn1b in ACI rats leads to increased proliferation and pregnancy-associated changes in the mammary gland due to perturbed systemic endocrine environment von Ding, Lina, Shunkwiler, Lauren B, Harper, Nicholas W, Zhao, Yang, Hinohara, Kunihiko, Huh, Sung Jin, Ekram, Muhammad B, Guz, Jan, Kern, Michael J, Awgulewitsch, Alexander, Shull, James D, Smits, Bart M G, Polyak, Kornelia

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Immune Escape in Breast Cancer During In Situ to Invasive Carcinoma Transition von Gil Del Alcazar, Carlos R, Huh, Sung Jin, Ekram, Muhammad B, Trinh, Anne, Liu, Lin L, Beca, Francisco, Zi, Xiaoyuan, Kwak, Minsuk, Bergholtz, Helga, Su, Ying, Ding, Lina, Russnes, Hege G, Richardson, Andrea L, Babski, Kirsten, Min Hui Kim, Elizabeth, McDonnell, 3rd, Charles H, Wagner, Jon, Rowberry, Ron, Freeman, Gordon J, Dillon, Deborah, Sorlie, Therese, Coussens, Lisa M, Garber, Judy E, Fan, Rong, Bobolis, Kristie, Allred, D Craig, Jeong, Joon, Park, So Yeon, Michor, Franziska, Polyak, Kornelia

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Aebp2 as an epigenetic regulator for neural crest cells von Kim, Hana, Kang, Keunsoo, Ekram, Muhammad B, Roh, Tae-Young, Kim, Joomyeong

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Heterogeneity and transcriptional drivers of triple-negative breast cancer von Jovanović, Bojana, Temko, Daniel, Stevens, Laura E., Seehawer, Marco, Fassl, Anne, Murphy, Katherine, Anand, Jayati, Garza, Kodie, Gulvady, Anushree, Qiu, Xintao, Harper, Nicholas W., Daniels, Veerle W., Xiao-Yun, Huang, Ge, Jennifer Y., Alečković, Maša, Pyrdol, Jason, Hinohara, Kunihiko, Egri, Shawn B., Papanastasiou, Malvina, Vadhi, Raga, Font-Tello, Alba, Witwicki, Robert, Peluffo, Guillermo, Trinh, Anne, Shu, Shaokun, Diciaccio, Benedetto, Ekram, Muhammad B., Subedee, Ashim, Herbert, Zachary T., Wucherpfennig, Kai W., Letai, Anthony G., Jaffe, Jacob D., Sicinski, Piotr, Brown, Myles, Dillon, Deborah, Long, Henry W., Michor, Franziska, Polyak, Kornelia

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Spatial Proximity to Fibroblasts Impacts Molecular Features and Therapeutic Sensitivity of Breast Cancer Cells Influencing Clinical Outcomes von Marusyk, Andriy, Tabassum, Doris P, Janiszewska, Michalina, Place, Andrew E, Trinh, Anne, Rozhok, Andrii I, Pyne, Saumyadipta, Guerriero, Jennifer L, Shu, Shaokun, Ekram, Muhammad, Ishkin, Alexander, Cahill, Daniel P, Nikolsky, Yuri, Chan, Timothy A, Rimawi, Mothaffar F, Hilsenbeck, Susan, Schiff, Rachel, Osborne, Kent C, Letai, Antony, Polyak, Kornelia

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Author Correction: Subclonal cooperation drives metastasis by modulating local and systemic immune microenvironments von Janiszewska, Michalina, Tabassum, Doris P., Castaño, Zafira, Cristea, Simona, Yamamoto, Kimiyo N., Kingston, Natalie L., Murphy, Katherine C., Shu, Shaokun, Harper, Nicholas W., Del Alcazar, Carlos Gil, Alečković, Maša, Ekram, Muhammad B., Cohen, Ofir, Kwak, Minsuk, Qin, Yuanbo, Laszewski, Tyler, Luoma, Adrienne, Marusyk, Andriy, Wucherpfennig, Kai W., Wagle, Nikhil, Fan, Rong, Michor, Franziska, McAllister, Sandra S., Polyak, Kornelia

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AEBP2 as a transcriptional activator and its role in cell migration von Kim, Hana, Ekram, Muhammad B., Bakshi, Arundhati, Kim, Joomyeong

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TRPS1 Is a Lineage-Specific Transcriptional Dependency in Breast Cancer von Witwicki, Robert M, Ekram, Muhammad B, Qiu, Xintao, Janiszewska, Michalina, Shu, Shaokun, Kwon, Mijung, Trinh, Anne, Frias, Elizabeth, Ramadan, Nadire, Hoffman, Greg, Yu, Kristine, Xie, Yingtian, McAllister, Gregory, McDonald, Rob, Golji, Javad, Schlabach, Michael, deWeck, Antoine, Keen, Nicholas, Chan, Ho Man, Ruddy, David, Rejtar, Tomas, Sovath, Sosathya, Silver, Serena, Sellers, William R, Jagani, Zainab, Hogarty, Michael D, Roberts, Charles, Brown, Myles, Stegmaier, Kimberly, Long, Henry, Shivdasani, Ramesh A, Pellman, David, Polyak, Kornelia

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Imprinting control region (ICR) of the Peg3 domain von KIM, Joomyeong, EKRAM, Muhammad B, KIM, Hana, FAISAL, Mohammad, FREY, Wesley D, HUANG, Jennifer M, TRAN, Kimngoc, KIM, Michelle M, SUNGRYUL YU

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Rex1/Zfp42 as an epigenetic regulator for genomic imprinting von Kim, Jeong Do, Kim, Hana, Ekram, Muhammad B, Yu, Sungryul, Faulk, Christopher, Kim, Joomyeong

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Retrotransposons as a major source of epigenetic variations in the mammalian genome von Ekram, Muhammad B., Kang, Keunsoo, Kim, Hana, Kim, Joomyeong

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Correction: Peg3 Mutational Effects on Reproduction and Placenta-Specific Gene Families von Kim, Joomyeong, Frey, Wesley D., He, Hongzhi, Kim, Hana, Ekram, Muhammad B., Bakshi, Arundhati, Faisal, Mohammad, Perera, Bambarendage P. U., Ye, An, Teruyama, Ryoichi

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Locus-specific DNA methylation analysis of retrotransposons in ES, somatic and cancer cells using High-Throughput Targeted Repeat Element Bisulfite Sequencing von Bakshi, Arundhati, Ekram, Muhammad B., Kim, Joomyeong

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