Role of Mobile DNA in the Evolution of Vancomycin-Resistant Enterococcus faecalis von Paulsen, I. T., Banerjei, L., Myers, G. S. A., Nelson, K. E., Seshadri, R., Read, T. D., Fouts, D. E., Eisen, J. A., Gill, S. R., Heidelberg, J. F., Tettelin, H., Dodson, R. J., Umayam, L., Brinkac, L., Beanan, M., Daugherty, S., DeBoy, R. T., Durkin, S., Kolonay, J., Madupu, R., Nelson, W., Vamathevan, J., Tran, B., Upton, J., Hansen, T., Shetty, J., Khouri, H., Utterback, T., Radune, D., Ketchum, K. A., Dougherty, B. A., Fraser, C. M.

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Evolution of Sensory Complexity Recorded in a Myxobacterial Genome von Goldman, B. S., Nierman, W. C., Kaiser, D., Slater, S. C., Durkin, A. S., Eisen, J. A., Ronning, C. M., Barbazuk, W. B., Blanchard, M., Field, C., Halling, C., Hinkle, G., Iartchuk, O., Kim, H. S., Mackenzie, C., Madupu, R., Miller, N., Shvartsbeyn, A., Sullivan, S. A., Vaudin, M., Wiegand, R., Kaplan, H. B., Eisen, J.

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Calyptogena magnifica Chemoautotrophic Symbiont Genome von Newton, I.L.G, Woyke, T, Auchtung, T.A, Dilly, G.F, Dutton, R.J, Fisher, M.C, Fontanez, K.M, Lau, E, Stewart, F.J, Richardson, P.M, Barry, K.W, Saunders, E, Detter, J.C, Wu, D, Eisen, J.A, Cavanaugh, C.M

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Whole-Genome Comparison of Mycobacterium tuberculosis Clinical and Laboratory Strains von Fleischmann, R D, Alland, D, Eisen, J A, Carpenter, L, White, O, Peterson, J, DeBoy, R, Dodson, R, Gwinn, M, Haft, D, Hickey, E, Kolonay, J F, Nelson, W C, Umayam, L A, Ermolaeva, M, Salzberg, S L, Delcher, A, Utterback, T, Weidman, J, Khouri, H, Gill, J, Mikula, A, Bishai, W, Jacobs, Jr, W R, Venter, J C, Fraser, C M

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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing von Shih, Patrick M., Wu, Dongying, Latifi, Amel, Axen, Seth D., Fewer, David P., Talla, Emmanuel, Calteau, Alexandra, Cai, Fei, de Marsac, Nicole Tandeau, Rippka, Rosmarie, Herdman, Michael, Sivonen, Kaarina, Coursin, Therese, Laurent, Thierry, Goodwin, Lynne, Nolan, Matt, Davenport, Karen W., Han, Cliff S., Rubin, Edward M., Eisen, Jonathan A., Woyke, Tanja, Gugger, Muriel, Kerfeld, Cheryl A.

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Microbial Genes in the Human Genome: Lateral Transfer or Gene Loss? von Salzberg, Steven L., White, Owen, Peterson, Jeremy, Eisen, Jonathan A.

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TIGRFAMs: a protein family resource for the functional identification of proteins von Haft, D H, Loftus, B J, Richardson, D L, Yang, F, Eisen, J A, Paulsen, I T, White, O

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Microbial genome sequencing von Fraser, Claire M., Eisen, Jonathan A., Salzberg, Steven L.

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Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis von Eisen, J A

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Horizontal gene transfer among microbial genomes: new insights from complete genome analysis von Eisen, Jonathan A

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Genome of Geobacter sulfurreducens: Metal Reduction in Subsurface Environments von Methé, B. A., Nelson, K. E., Eisen, J. A., Paulsen, I. T., Nelson, W., Heidelberg, J. F., Wu, D., Wu, M., Ward, N., Beanan, M. J., Dodson, R. J., Madupu, R., Brinkac, L. M., Daugherty, S. C., DeBoy, R. T., Durkin, A. S., Gwinn, M., Kolonay, J. F., Sullivan, S. A., Haft, D. H., Selengut, J., Davidsen, T. M., Zafar, N., White, O., Tran, B., Romero, C., H. A Forberger, Weidman, J., Khouri, H., Feldblyum, T. V., Utterback, T. R., Van Aken, S. E., Lovley, D. R., Fraser, C. M.

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Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58 von Tettelin, Hervé, Saunders, Nigel J., Heidelberg, John, Jeffries, Alex C., Nelson, Karen E., Eisen, Jonathan A., Ketchum, Karen A., Hood, Derek W., Peden, John F., Dodson, Robert J., Nelson, William C., Gwinn, Michelle L., DeBoy, Robert, Peterson, Jeremy D., Hickey, Erin K., Haft, Daniel H., Salzberg, Steven L., White, Owen, Fleischmann, Robert D., Dougherty, Brian A., Mason, Tanya, Ciecko, Anne, Parksey, Debbie S., Blair, Eric, Cittone, Henry, Clark, Emily B., Cotton, Matthew D., Utterback, Terry R., Khouri, Hoda, Qin, Haiying, Vamathevan, Jessica, Gill, John, Scarlato, Vincenzo, Masignani, Vega, Pizza, Mariagrazia, Grandi, Guido, Sun, Li, Smith, Hamilton O., Fraser, Claire M., Moxon, E. Richard, Rappuoli, Rino, Venter, J. Craig

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Genome Sequence of the Radioresistant Bacterium Deinococcus radiodurans R1 von White, Owen, Eisen, Jonathan A., Heidelberg, John F., Hickey, Erin K., Peterson, Jeremy D., Dodson, Robert J., Haft, Daniel H., Gwinn, Michelle L., Nelson, William C., Richardson, Delwood L., Moffat, Kelly S., Qin, Haiying, Jiang, Lingxia, Pamphile, Wanda, Crosby, Marie, Shen, Mian, Vamathevan, Jessica J., Lam, Peter, McDonald, Lisa, Utterback, Terry, Zalewski, Celeste, Makarova, Kira S., Aravind, L., Daly, Michael J., Minton, Kenneth W., Fleischmann, Robert D., Ketchum, Karen A., Nelson, Karen E., Salzberg, Steven, Smith, Hamilton O., Venter, J. Craig, Fraser, Claire M.

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A phylogenomic study of the MutS family of proteins von Eisen, J A

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Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima von Nelson, Karen E., Clayton, Rebecca A., Gill, Steven R., Gwinn, Michelle L., Dodson, Robert J., Haft, Daniel H., Hickey, Erin K., Peterson, Jeremy D., Nelson, William C., Ketchum, Karen A., McDonald, Lisa, Utterback, Teresa R., Malek, Joel A., Linher, Katja D., Garrett, Mina M., Stewart, Ashley M., Cotton, Matthew D., Pratt, Matthew S., Phillips, Cheryl A., Richardson, Delwood, Heidelberg, John, Sutton, Granger G., Fleischmann, Robert D., Eisen, Jonathan A., White, Owen, Salzberg, Steven L., Smith, Hamilton O., Venter, J. Craig, Fraser, Claire M.

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Second Gene for Gonadotropin-Releasing Hormone in Humans von White, Richard B., Eisen, Jonathan A., Kasten, Thomas L., Fernald, Russell D.

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The RecA protein as a model molecule for molecular systematic studies of bacteria: comparison of trees of RecAs and 16S rRNAs from the same species von Eisen, J A

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Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions von Eisen, Jonathan A., Sweder, Kevin S., Hanawalt, Philip C.

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Genome of Thermotoga maritima MSB8 von Nelson, Karen E, Eisen, Jonathan A, Fraser, Claire M

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Sequence and drug susceptibility of subtype C reverse transcriptase from human immunodeficiency virus type 1 seroconverters in Zimbabwe von Shafer, R W, Eisen, J A, Merigan, T C, Katzenstein, D A

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