Genomics of cellulosic biofuels von Rubin, Edward M

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Rhizosphere microbiome structure alters to enable wilt resistance in tomato von Kwak, Min-Jung, Kong, Hyun Gi, Choi, Kihyuck, Kwon, Soon-Kyeong, Song, Ju Yeon, Lee, Jidam, Lee, Pyeong An, Choi, Soo Yeon, Seo, Minseok, Lee, Hyoung Ju, Jung, Eun Joo, Park, Hyein, Roy, Nazish, Kim, Heebal, Lee, Myeong Min, Rubin, Edward M, Lee, Seon-Woo, Kim, Jihyun F

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Genomic views of distant-acting enhancers von Visel, Axel, Rubin, Edward M, Pennacchio, Len A

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A High-Resolution Enhancer Atlas of the Developing Telencephalon von Visel, Axel, Taher, Leila, Girgis, Hani, May, Dalit, Golonzhka, Olga, Hoch, Renee V., McKinsey, Gabriel L., Pattabiraman, Kartik, Silberberg, Shanni N., Blow, Matthew J., Hansen, David V., Nord, Alex S., Akiyama, Jennifer A., Holt, Amy, Hosseini, Roya, Phouanenavong, Sengthavy, Plajzer-Frick, Ingrid, Shoukry, Malak, Afzal, Veena, Kaplan, Tommy, Kriegstein, Arnold R., Rubin, Edward M., Ovcharenko, Ivan, Pennacchio, Len A., Rubenstein, John L.R.

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Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw von Mackelprang, Rachel, Waldrop, Mark P., DeAngelis, Kristen M., David, Maude M., Chavarria, Krystle L., Blazewicz, Steven J., Rubin, Edward M., Jansson, Janet K.

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ChIP-seq accurately predicts tissue-specific activity of enhancers von Visel, Axel, Blow, Matthew J., Li, Zirong, Zhang, Tao, Akiyama, Jennifer A., Holt, Amy, Plajzer-Frick, Ingrid, Shoukry, Malak, Wright, Crystal, Chen, Feng, Afzal, Veena, Ren, Bing, Rubin, Edward M., Pennacchio, Len A.

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Insights into the phylogeny and coding potential of microbial dark matter von Rinke, Christian, Schwientek, Patrick, Sczyrba, Alexander, Ivanova, Natalia N., Anderson, Iain J., Cheng, Jan-Fang, Darling, Aaron, Malfatti, Stephanie, Swan, Brandon K., Gies, Esther A., Dodsworth, Jeremy A., Hedlund, Brian P., Tsiamis, George, Sievert, Stefan M., Liu, Wen-Tso, Eisen, Jonathan A., Hallam, Steven J., Kyrpides, Nikos C., Stepanauskas, Ramunas, Rubin, Edward M., Hugenholtz, Philip, Woyke, Tanja

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The Epigenomic Landscape of Prokaryotes von Blow, Matthew J, Clark, Tyson A, Daum, Chris G, Deutschbauer, Adam M, Fomenkov, Alexey, Fries, Roxanne, Froula, Jeff, Kang, Dongwan D, Malmstrom, Rex R, Morgan, Richard D, Posfai, Janos, Singh, Kanwar, Visel, Axel, Wetmore, Kelly, Zhao, Zhiying, Rubin, Edward M, Korlach, Jonas, Pennacchio, Len A, Roberts, Richard J

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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill von Mason, Olivia U, Hazen, Terry C, Borglin, Sharon, Chain, Patrick S G, Dubinsky, Eric A, Fortney, Julian L, Han, James, Holman, Hoi-Ying N, Hultman, Jenni, Lamendella, Regina, Mackelprang, Rachel, Malfatti, Stephanie, Tom, Lauren M, Tringe, Susannah G, Woyke, Tanja, Zhou, Jizhong, Rubin, Edward M, Jansson, Janet K

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Targeted deletion of the 9p21 non-coding coronary artery disease risk interval in mice von Cohen, Jonathan C, May, Dalit, Afzal, Veena, Gong, Elaine, Pennacchio, Len A, Zhu, Yiwen, Rubin, Edward M, Attanasio, Catia, Blow, Matthew J, Visel, Axel

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Tissue-specific RNA expression marks distant-acting developmental enhancers von Wu, Han, Nord, Alex S, Akiyama, Jennifer A, Shoukry, Malak, Afzal, Veena, Rubin, Edward M, Pennacchio, Len A, Visel, Axel

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Prehistoric genomes reveal the genetic foundation and cost of horse domestication von Schubert, Mikkel, Jónsson, Hákon, Chang, Dan, Sarkissian, Clio Der, Ermini, Luca, Ginolhac, Aurélien, Albrechtsen, Anders, Dupanloup, Isabelle, Foucal, Adrien, Petersen, Bent, Fumagalli, Matteo, Raghavan, Maanasa, Seguin-Orlando, Andaine, Korneliussen, Thorfinn S, Velazquez, Amhed MV, Stenderup, Jesper, Hoover, Cindi A, Rubin, Carl-Johan, Alfarhan, Ahmed H, Alquraishi, Saleh A, Al-Rasheid, Khaled AS, MacHugh, David E, Kalbfleisch, Ted, MacLeod, James N, Rubin, Edward M, Sicheritz-Ponten, Thomas, Andersson, Leif, Hofreiter, Michael, Marques-Bonet, Tomas, Gilbert, M Thomas P, Nielsen, Rasmus, Excoffier, Laurent, Willerslev, Eske, Shapiro, Beth, Orlando, Ludovic

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Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen von Hess, Matthias, Sczyrba, Alexander, Egan, Rob, Kim, Tae-Wan, Chokhawala, Harshal, Schroth, Gary, Luo, Shujun, Clark, Douglas S., Chen, Feng, Zhang, Tao, Mackie, Roderick I., Pennacchio, Len A., Tringe, Susannah G., Visel, Axel, Woyke, Tanja, Wang, Zhong, Rubin, Edward M.

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Progressive Loss of Function in a Limb Enhancer during Snake Evolution von Kvon, Evgeny Z., Kamneva, Olga K., Melo, Uirá S., Barozzi, Iros, Osterwalder, Marco, Mannion, Brandon J., Tissières, Virginie, Pickle, Catherine S., Plajzer-Frick, Ingrid, Lee, Elizabeth A., Kato, Momoe, Garvin, Tyler H., Akiyama, Jennifer A., Afzal, Veena, Lopez-Rios, Javier, Rubin, Edward M., Dickel, Diane E., Pennacchio, Len A., Visel, Axel

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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing von Shih, Patrick M., Wu, Dongying, Latifi, Amel, Axen, Seth D., Fewer, David P., Talla, Emmanuel, Calteau, Alexandra, Cai, Fei, de Marsac, Nicole Tandeau, Rippka, Rosmarie, Herdman, Michael, Sivonen, Kaarina, Coursin, Therese, Laurent, Thierry, Goodwin, Lynne, Nolan, Matt, Davenport, Karen W., Han, Cliff S., Rubin, Edward M., Eisen, Jonathan A., Woyke, Tanja, Gugger, Muriel, Kerfeld, Cheryl A.

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Community structure and metabolism through reconstruction of microbial genomes from the environment von Banfield, Jillian F, Tyson, Gene W, Chapman, Jarrod, Hugenholtz, Philip, Allen, Eric E, Ram, Rachna J, Richardson, Paul M, Solovyev, Victor V, Rubin, Edward M, Rokhsar, Daniel S

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Fine Tuning of Craniofacial Morphology by Distant-Acting Enhancers von Attanasio, Catia, Nord, Alex S., Zhu, Yiwen, Blow, Matthew J., Li, Zirong, Liberton, Denise K., Morrison, Harris, Plajzer-Frick, Ingrid, Holt, Amy, Hosseini, Roya, Phouanenavong, Sengthavy, Akiyama, Jennifer A., Shoukry, Malak, Afzal, Veena, Rubin, Edward M., FitzPatrick, David R., Ren, Bing, Hallgrímsson, Benedikt, Pennacchio, Len A., Visel, Axel

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A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea von Eisen, Jonathan A, Wu, Dongying, Hugenholtz, Philip, Mavromatis, Konstantinos, Pukall, Rüdiger, Dalin, Eileen, Ivanova, Natalia N, Kunin, Victor, Goodwin, Lynne, Wu, Martin, Tindall, Brian J, Hooper, Sean D, Pati, Amrita, Lykidis, Athanasios, Spring, Stefan, Anderson, Iain J, D'haeseleer, Patrik, Zemla, Adam, Singer, Mitchell, Lapidus, Alla, Nolan, Matt, Copeland, Alex, Han, Cliff, Chen, Feng, Cheng, Jan-Fang, Lucas, Susan, Kerfeld, Cheryl, Lang, Elke, Gronow, Sabine, Chain, Patrick, Bruce, David, Rubin, Edward M, Kyrpides, Nikos C, Klenk, Hans-Peter

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Genome-Wide Experimental Determination of Barriers to Horizontal Gene Transfer von Sorek, Rotem, Zhu, Yiwen, Creevey, Christopher J, Francino, M. Pilar, Bork, Peer, Rubin, Edward M

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The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses von Goldstein, Tracey, Anthony, Simon J., Gbakima, Aiah, Bird, Brian H., Bangura, James, Tremeau-Bravard, Alexandre, Belaganahalli, Manjunatha N., Wells, Heather L., Dhanota, Jasjeet K., Liang, Eliza, Grodus, Michael, Jangra, Rohit K., DeJesus, Veronica A., Lasso, Gorka, Smith, Brett R., Jambai, Amara, Kamara, Brima O., Kamara, Sorie, Bangura, William, Monagin, Corina, Shapira, Sagi, Johnson, Christine K., Saylors, Karen, Rubin, Edward M., Chandran, Kartik, Lipkin, W. Ian, Mazet, Jonna A. K.

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