Benefits from the joint analysis of host genomes and metagenomes: Select the holobiont von Estellé, Jordi

Volltext

Characterization of bacterial microbiota compositions along the intestinal tract in pigs and their interactions and functions von Crespo-Piazuelo, Daniel, Estellé, Jordi, Revilla, Manuel, Criado-Mesas, Lourdes, Ramayo-Caldas, Yuliaxis, Óvilo, Cristina, Fernández, Ana I., Ballester, Maria, Folch, Josep M.

Volltext

Fast computation and applications of genome mappability von Derrien, Thomas, Estellé, Jordi, Marco Sola, Santiago, Knowles, David G, Raineri, Emanuele, Guigó, Roderic, Ribeca, Paolo

Volltext

Chronic Trichuris muris Infection Decreases Diversity of the Intestinal Microbiota and Concomitantly Increases the Abundance of Lactobacilli von Holm, Jacob Bak, Sorobetea, Daniel, Kiilerich, Pia, Ramayo-Caldas, Yuliaxis, Estellé, Jordi, Ma, Tao, Madsen, Lise, Kristiansen, Karsten, Svensson-Frej, Marcus

Volltext

Phylogenetic network analysis applied to pig gut microbiota identifies an ecosystem structure linked with growth traits von Ramayo-Caldas, Yuliaxis, Mach, Nuria, Lepage, Patricia, Levenez, Florence, Denis, Catherine, Lemonnier, Gaetan, Leplat, Jean-Jacques, Billon, Yvon, Berri, Mustapha, Doré, Jöel, Rogel-Gaillard, Claire, Estellé, Jordi

Volltext

Early-life establishment of the swine gut microbiome and impact on host phenotypes von Mach, Núria, Berri, Mustapha, Estellé, Jordi, Levenez, Florence, Lemonnier, Gaëtan, Denis, Catherine, Leplat, Jean-Jacques, Chevaleyre, Claire, Billon, Yvon, Doré, Joël, Rogel-Gaillard, Claire, Lepage, Patricia

Volltext

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis von Dillies, Marie-Agnès, Rau, Andrea, Aubert, Julie, Hennequet-Antier, Christelle, Jeanmougin, Marine, Servant, Nicolas, Keime, Céline, Marot, Guillemette, Castel, David, Estelle, Jordi, Guernec, Gregory, Jagla, Bernd, Jouneau, Luc, Laloë, Denis, Le Gall, Caroline, Schaëffer, Brigitte, Le Crom, Stéphane, Guedj, Mickaël, Jaffrézic, Florence

Volltext

The impact of host genetics on porcine gut microbiota composition excluding maternal and postnatal environmental influences von Heras-Molina, Ana, Estellé, Jordi, Vázquez-Gómez, Marta, López-García, Adrián, Pesantez-Pacheco, José-Luis, Astiz, Susana, Garcia-Contreras, Consolación, Escudero, Rosa, Isabel, Beatriz, Gonzalez-Bulnes, Antonio, Óvilo, Cristina

Volltext

Liver transcriptome profile in pigs with extreme phenotypes of intramuscular fatty acid composition von Ramayo-Caldas, Yuliaxis, Mach, Nuria, Esteve-Codina, Anna, Corominas, Jordi, Castelló, Anna, Ballester, Maria, Estellé, Jordi, Ibáñez-Escriche, Noelia, Fernández, Ana I, Pérez-Enciso, Miguel, Folch, Josep M

Volltext

Early Salmonella Typhimurium infection in pigs disrupts Microbiome composition and functionality principally at the ileum mucosa von Argüello, Héctor, Estellé, Jordi, Zaldívar-López, Sara, Jiménez-Marín, Ángeles, Carvajal, Ana, López-Bascón, Mª Asunción, Crispie, Fiona, O’Sullivan, Orla, Cotter, Paul D., Priego-Capote, Feliciano, Morera, Luis, Garrido, Juan J.

Volltext

Identification of rumen microbial biomarkers linked to methane emission in Holstein dairy cows von Ramayo‐Caldas, Yuliaxis, Zingaretti, Laura, Popova, Milka, Estellé, Jordi, Bernard, Aurelien, Pons, Nicolas, Bellot, Pau, Mach, Núria, Rau, Andrea, Roume, Hugo, Perez‐Enciso, Miguel, Faverdin, Philippe, Edouard, Nadège, Ehrlich, Dusko, Morgavi, Diego P., Renand, Gilles

Volltext

Differences in muscle transcriptome among pigs phenotypically extreme for fatty acid composition von Puig-Oliveras, Anna, Ramayo-Caldas, Yuliaxis, Corominas, Jordi, Estellé, Jordi, Pérez-Montarelo, Dafne, Hudson, Nicholas J, Casellas, Joaquim, Folch, Josep M, Ballester, Maria

Volltext

Association between the pig genome and its gut microbiota composition von Crespo-Piazuelo, Daniel, Migura-Garcia, Lourdes, Estellé, Jordi, Criado-Mesas, Lourdes, Revilla, Manuel, Castelló, Anna, Muñoz, María, García-Casco, Juan M., Fernández, Ana I., Ballester, Maria, Folch, Josep M.

Volltext

Malignant features of minipig melanomas prior to spontaneous regression von Débare, Héloïse, Blanc, Fany, Piton, Guillaume, Leplat, Jean-Jacques, Vincent-Naulleau, Silvia, Rivière, Julie, Vilotte, Marthe, Marthey, Sylvain, Lecardonnel, Jérôme, Coville, Jean-Luc, Estellé, Jordi, Rau, Andrea, Bourneuf, Emmanuelle, Egidy, Giorgia

Volltext

Comparative analysis of the caecal tonsil transcriptome in two chicken lines experimentally infected with Salmonella Enteritidis von Cazals, Anaïs, Rau, Andrea, Estellé, Jordi, Bruneau, Nicolas, Coville, Jean-Luc, Menanteau, Pierrette, Rossignol, Marie-Noëlle, Jardet, Deborah, Bevilacqua, Claudia, Bed'Hom, Bertrand, Velge, Philippe, Calenge, Fanny

Volltext

Caecal microbiota composition of experimental inbred MHC-B lines infected with IBV differs according to genetics and vaccination von Borey, Marion, Bed’Hom, Bertrand, Bruneau, Nicolas, Estellé, Jordi, Larsen, Frederik, Blanc, Fany, der Laan, Marie-Hélène Pinard-van, Dalgaard, Tina, Calenge, Fanny

Volltext

Analysis of porcine adipose tissue transcriptome reveals differences in de novo fatty acid synthesis in pigs with divergent muscle fatty acid composition von Corominas, Jordi, Ramayo-Caldas, Yuliaxis, Puig-Oliveras, Anna, Estellé, Jordi, Castelló, Anna, Alves, Estefania, Pena, Ramona N, Ballester, Maria, Folch, Josep M

Volltext

Broilers divergently selected for digestibility differ for their digestive microbial ecosystems von Borey, Marion, Estellé, Jordi, Caidi, Aziza, Bruneau, Nicolas, Coville, Jean-Luc, Hennequet-Antier, Christelle, Mignon-Grasteau, Sandrine, Calenge, Fanny

Volltext

Interrelation between gut microbiota, SCFA, and fatty acid composition in pigs von Sebastià, Cristina, Folch, Josep M, Ballester, Maria, Estellé, Jordi, Passols, Magí, Muñoz, María, García-Casco, Juan M, Fernández, Ana I, Castelló, Anna, Sánchez, Armand, Crespo-Piazuelo, Daniel

Volltext

Influence of genetic background and dietary oleic acid on gut microbiota composition in Duroc and Iberian pigs von López-García, Adrián, Benítez, Rita, Núñez, Yolanda, Gómez-Izquierdo, Emilio, de Mercado, Eduardo, García-Casco, Juan M, González-Recio, Óscar, López-Bote, Clemente, Estellé, Jordi, Óvilo, Cristina

Volltext