Imaging the future: the emerging era of single‐cell spatial proteomics von Paul, Indranil, White, Carl, Turcinovic, Isabella, Emili, Andrew

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Tissue subcellular fractionation and protein extraction for use in mass-spectrometry-based proteomics von Cox, Brian, Emili, Andrew

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Enrichment map: a network-based method for gene-set enrichment visualization and interpretation von Merico, Daniele, Isserlin, Ruth, Stueker, Oliver, Emili, Andrew, Bader, Gary D

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Nanoparticle Size and Surface Chemistry Determine Serum Protein Adsorption and Macrophage Uptake von Walkey, Carl D, Olsen, Jonathan B, Guo, Hongbo, Emili, Andrew, Chan, Warren C. W

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Protein Corona Fingerprinting Predicts the Cellular Interaction of Gold and Silver Nanoparticles von Walkey, Carl D, Olsen, Jonathan B, Song, Fayi, Liu, Rong, Guo, Hongbo, Olsen, D. Wesley H, Cohen, Yoram, Emili, Andrew, Chan, Warren C. W

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Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery von Havugimana, Pierre C., Goel, Raghuveera Kumar, Phanse, Sadhna, Youssef, Ahmed, Padhorny, Dzmitry, Kotelnikov, Sergei, Kozakov, Dima, Emili, Andrew

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Editorial: Systems pharmacology in the spotlight: trending technologies in network biology and drug discovery von Goel, Raghuveera Kumar, Lukong, Kiven Erique, Emili, Andrew

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Secreted Biomolecules Alter the Biological Identity and Cellular Interactions of Nanoparticles von Albanese, Alexandre, Walkey, Carl D, Olsen, Jonathan B, Guo, Hongbo, Emili, Andrew, Chan, Warren C. W

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Intracellular Density of Wolbachia Is Mediated by Host Autophagy and the Bacterial Cytoplasmic Incompatibility Gene cifB in a Cell Type-Dependent Manner in Drosophila melanogaster von Deehan, Mark, Lin, Weiwei, Blum, Benjamin, Emili, Andrew, Frydman, Horacio

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Assessment of separation methods for extracellular vesicles from human and mouse brain tissues and human cerebrospinal fluids von Muraoka, Satoshi, Lin, Weiwei, Chen, Mei, Hersh, Samuel W., Emili, Andrew, Xia, Weiming, Ikezu, Tsuneya

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Hypoxia-Induced Changes in the Fibroblast Secretome, Exosome, and Whole-Cell Proteome Using Cultured, Cardiac-Derived Cells Isolated from Neonatal Mice von Cosme, Jake, Guo, Hongbo, Hadipour-Lakmehsari, Sina, Emili, Andrew, Gramolini, Anthony O

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Statistical and Computational Methods for Comparative Proteomic Profiling Using Liquid Chromatography-Tandem Mass Spectrometry von Listgarten, Jennifer, Emili, Andrew

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State of the art in data integration and network biology (special issue) von Emili, Andrew

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Multiparameter functional diversity of human C2H2 zinc finger proteins von Schmitges, Frank W, Radovani, Ernest, Najafabadi, Hamed S, Barazandeh, Marjan, Campitelli, Laura F, Yin, Yimeng, Jolma, Arttu, Zhong, Guoqing, Guo, Hongbo, Kanagalingam, Tharsan, Dai, Wei F, Taipale, Jussi, Emili, Andrew, Greenblatt, Jack F, Hughes, Timothy R

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Amino Acid Starvation Induced by Invasive Bacterial Pathogens Triggers an Innate Host Defense Program von Tattoli, Ivan, Sorbara, Matthew T., Vuckovic, Dajana, Ling, Arthur, Soares, Fraser, Carneiro, Leticia A.M., Yang, Chloe, Emili, Andrew, Philpott, Dana J., Girardin, Stephen E.

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Organoids Model Transcriptional Hallmarks of Oncogenic KRAS Activation in Lung Epithelial Progenitor Cells von Dost, Antonella F.M., Moye, Aaron L., Vedaie, Marall, Tran, Linh M., Fung, Eileen, Heinze, Dar, Villacorta-Martin, Carlos, Huang, Jessie, Hekman, Ryan, Kwan, Julian H., Blum, Benjamin C., Louie, Sharon M., Rowbotham, Samuel P., Sainz de Aja, Julio, Piper, Mary E., Bhetariya, Preetida J., Bronson, Roderick T., Emili, Andrew, Mostoslavsky, Gustavo, Fishbein, Gregory A., Wallace, William D., Krysan, Kostyantyn, Dubinett, Steven M., Yanagawa, Jane, Kotton, Darrell N., Kim, Carla F.

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Usher syndrome type 1-associated gene, pcdh15b, is required for photoreceptor structural integrity in zebrafish von Miles, Amanda, Blair, Clarke, Emili, Andrew, Tropepe, Vincent

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The binary protein-protein interaction landscape of Escherichia coli von Rajagopala, Seesandra V, Sikorski, Patricia, Kumar, Ashwani, Mosca, Roberto, Vlasblom, James, Arnold, Roland, Franca-Koh, Jonathan, Pakala, Suman B, Phanse, Sadhna, Ceol, Arnaud, Häuser, Roman, Siszler, Gabriella, Wuchty, Stefan, Emili, Andrew, Babu, Mohan, Aloy, Patrick, Pieper, Rembert, Uetz, Peter

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Proteomic methods for drug target discovery von Sleno, Lekha, Emili, Andrew

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Patient-specific iPSCs carrying an SFTPC mutation reveal the intrinsic alveolar epithelial dysfunction at the inception of interstitial lung disease von Alysandratos, Konstantinos-Dionysios, Russo, Scott J., Petcherski, Anton, Taddeo, Evan P., Acín-Pérez, Rebeca, Villacorta-Martin, Carlos, Jean, J.C., Mulugeta, Surafel, Rodriguez, Luis R., Blum, Benjamin C., Hekman, Ryan M., Hix, Olivia T., Minakin, Kasey, Vedaie, Marall, Kook, Seunghyi, Tilston-Lunel, Andrew M., Varelas, Xaralabos, Wambach, Jennifer A., Cole, F. Sessions, Hamvas, Aaron, Young, Lisa R., Liesa, Marc, Emili, Andrew, Guttentag, Susan H., Shirihai, Orian S., Beers, Michael F., Kotton, Darrell N.

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