Single-nucleus and single-cell transcriptomes compared in matched cortical cell types von Bakken, Trygve E, Hodge, Rebecca D, Miller, Jeremy A, Yao, Zizhen, Nguyen, Thuc Nghi, Aevermann, Brian, Barkan, Eliza, Bertagnolli, Darren, Casper, Tamara, Dee, Nick, Garren, Emma, Goldy, Jeff, Graybuck, Lucas T, Kroll, Matthew, Lasken, Roger S, Lathia, Kanan, Parry, Sheana, Rimorin, Christine, Scheuermann, Richard H, Schork, Nicholas J, Shehata, Soraya I, Tieu, Michael, Phillips, John W, Bernard, Amy, Smith, Kimberly A, Zeng, Hongkui, Lein, Ed S, Tasic, Bosiljka

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A comparison of anatomic and cellular transcriptome structures across 40 human brain diseases von Zeighami, Yashar, Bakken, Trygve E, Nickl-Jockschat, Thomas, Peterson, Zeru, Jegga, Anil G, Miller, Jeremy A, Schulkin, Jay, Evans, Alan C, Lein, Ed S, Hawrylycz, Michael

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Sex-Based Analysis of De Novo Variants in Neurodevelopmental Disorders von Turner, Tychele N., Wilfert, Amy B., Bakken, Trygve E., Bernier, Raphael A., Pepper, Micah R., Zhang, Zhancheng, Torene, Rebecca I., Retterer, Kyle, Eichler, Evan E.

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Single-cell transcriptomic evidence for dense intracortical neuropeptide networks von Smith, Stephen J, Sümbül, Uygar, Graybuck, Lucas T, Collman, Forrest, Seshamani, Sharmishtaa, Gala, Rohan, Gliko, Olga, Elabbady, Leila, Miller, Jeremy A, Bakken, Trygve E, Rossier, Jean, Yao, Zizhen, Lein, Ed, Zeng, Hongkui, Tasic, Bosiljka, Hawrylycz, Michael

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Common cell type nomenclature for the mammalian brain von Miller, Jeremy A., Gouwens, Nathan W., Tasic, Bosiljka, Collman, Forrest, van Velthoven, Cindy T. J., Bakken, Trygve E., Hawrylycz, Michael J., Zeng, Hongkui, Lein, Ed S., Bernard, Amy

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Spatiotemporal dynamics of the postnatal developing primate brain transcriptome von Bakken, Trygve E, Miller, Jeremy A, Luo, Rui, Bernard, Amy, Bennett, Jeffrey L, Lee, Chang-Kyu, Bertagnolli, Darren, Parikshak, Neelroop N, Smith, Kimberly A, Sunkin, Susan M, Amaral, David G, Geschwind, Daniel H, Lein, Ed S

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A Common MECP2 Haplotype Associates with Reduced Cortical Surface Area in Humans in Two Independent Populations von Joyner, Alexander H., Roddey, J. Cooper, Bloss, Cinnamon S., Bakken, Trygve E., Rimol, Lars M., Melle, Ingrid, Agartz, Ingrid, Djurovic, Srdjan, Topol, Eric J., Schork, Nicholas J., Andreassen, Ole A., Dale, Anders M., Stevens, Charles F.

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Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity von Coe, Bradley P., Stessman, Holly A. F., Sulovari, Arvis, Geisheker, Madeleine R., Bakken, Trygve E., Lake, Allison M., Dougherty, Joseph D., Lein, Ed S., Hormozdiari, Fereydoun, Bernier, Raphael A., Eichler, Evan E.

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Visual system scaling in teleost fish von Bakken, Trygve E., Stevens, Charles F.

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The complete genome sequence of a Neanderthal from the Altai Mountains von Prüfer, Kay, Racimo, Fernando, Patterson, Nick, Jay, Flora, Sankararaman, Sriram, Sawyer, Susanna, Heinze, Anja, Renaud, Gabriel, Sudmant, Peter H., de Filippo, Cesare, Li, Heng, Mallick, Swapan, Dannemann, Michael, Fu, Qiaomei, Kircher, Martin, Kuhlwilm, Martin, Lachmann, Michael, Meyer, Matthias, Ongyerth, Matthias, Siebauer, Michael, Theunert, Christoph, Tandon, Arti, Moorjani, Priya, Pickrell, Joseph, Mullikin, James C., Vohr, Samuel H., Green, Richard E., Hellmann, Ines, Johnson, Philip L. F., Blanche, Hélène, Cann, Howard, Kitzman, Jacob O., Shendure, Jay, Eichler, Evan E., Lein, Ed S., Bakken, Trygve E., Golovanova, Liubov V., Doronichev, Vladimir B., Shunkov, Michael V., Derevianko, Anatoli P., Viola, Bence, Slatkin, Montgomery, Reich, David, Kelso, Janet, Pääbo, Svante

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Recent ultra-rare inherited variants implicate new autism candidate risk genes von Wilfert, Amy B., Turner, Tychele N., Murali, Shwetha C., Hsieh, PingHsun, Sulovari, Arvis, Wang, Tianyun, Coe, Bradley P., Guo, Hui, Hoekzema, Kendra, Bakken, Trygve E., Winterkorn, Lara H., Evani, Uday S., Byrska-Bishop, Marta, Earl, Rachel K., Bernier, Raphael A., Zody, Michael C., Eichler, Evan E.

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h-Channels Contribute to Divergent Intrinsic Membrane Properties of Supragranular Pyramidal Neurons in Human versus Mouse Cerebral Cortex von Kalmbach, Brian E., Buchin, Anatoly, Long, Brian, Close, Jennie, Nandi, Anirban, Miller, Jeremy A., Bakken, Trygve E., Hodge, Rebecca D., Chong, Peter, de Frates, Rebecca, Dai, Kael, Maltzer, Zoe, Nicovich, Philip R., Keene, C. Dirk, Silbergeld, Daniel L., Gwinn, Ryder P., Cobbs, Charles, Ko, Andrew L., Ojemann, Jeffrey G., Koch, Christof, Anastassiou, Costas A., Lein, Ed S., Ting, Jonathan T.

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Oligodendrocyte precursor cells ingest axons in the mouse neocortex von Buchanan, JoAnn, Elabbady, Leila, Collman, Forrest, Jorstad, Nikolas L, Bakken, Trygve E, Ott, Carolyn, Glatzer, Jenna, Bleckert, Adam A, Bodor, Agnes L, Brittain, Derrick, Bumbarger, Daniel J, Mahalingam, Gayathri, Seshamani, Sharmishtaa, Schneider-Mizell, Casey, Takeno, Marc M, Torres, Russel, Yin, Wenjing, Hodge, Rebecca D, Castro, Manuel, Dorkenwald, Sven, Ih, Dodam, Jordan, Chris S, Kemnitz, Nico, Lee, Kisuk, Lu, Ran, Macrina, Thomas, Mu, Shang, Popovych, Sergiy, Silversmith, William M, Tartavull, Ignacio, Turner, Nicholas L, Wilson, Alyssa M, Wong, William, Wu, Jingpeng, Zlateski, Aleksandar, Zung, Jonathan, Lippincott-Schwartz, Jennifer, Lein, Ed S, Seung, H Sebastian, Bergles, Dwight E, Reid, R Clay, da Costa, Nuno Maçarico

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Transcriptomic and morphophysiological evidence for a specialized human cortical GABAergic cell type von Boldog, Eszter, Bakken, Trygve E., Hodge, Rebecca D., Novotny, Mark, Aevermann, Brian D., Baka, Judith, Bordé, Sándor, Close, Jennie L., Diez-Fuertes, Francisco, Ding, Song-Lin, Faragó, Nóra, Kocsis, Ágnes K., Kovács, Balázs, Maltzer, Zoe, McCorrison, Jamison M., Miller, Jeremy A., Molnár, Gábor, Oláh, Gáspár, Ozsvár, Attila, Rózsa, Márton, Shehata, Soraya I., Smith, Kimberly A., Sunkin, Susan M., Tran, Danny N., Venepally, Pratap, Wall, Abby, Puskás, László G., Barzó, Pál, Steemers, Frank J., Schork, Nicholas J., Scheuermann, Richard H., Lasken, Roger S., Lein, Ed S., Tamás, Gábor

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Interindividual variation in human cortical cell type abundance and expression von Johansen, Nelson, Somasundaram, Saroja, Travaglini, Kyle J, Yanny, Anna Marie, Shumyatcher, Maya, Casper, Tamara, Cobbs, Charles, Dee, Nick, Ellenbogen, Richard, Ferreira, Manuel, Goldy, Jeff, Guzman, Junitta, Gwinn, Ryder, Hirschstein, Daniel, Jorstad, Nikolas L, Keene, C Dirk, Ko, Andrew, Levi, Boaz P, Ojemann, Jeffrey G, Pham, Thanh, Shapovalova, Nadiya, Silbergeld, Daniel, Sulc, Josef, Torkelson, Amy, Tung, Herman, Smith, Kimberly, Lein, Ed S, Bakken, Trygve E, Hodge, Rebecca D, Miller, Jeremy A

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Structurally divergent and recurrently mutated regions of primate genomes von Mao, Yafei, Harvey, William T., Porubsky, David, Munson, Katherine M., Hoekzema, Kendra, Lewis, Alexandra P., Audano, Peter A., Rozanski, Allison, Yang, Xiangyu, Zhang, Shilong, Yoo, DongAhn, Gordon, David S., Fair, Tyler, Wei, Xiaoxi, Logsdon, Glennis A., Haukness, Marina, Dishuck, Philip C., Jeong, Hyeonsoo, del Rosario, Ricardo, Bauer, Vanessa L., Fattor, Will T., Wilkerson, Gregory K., Mao, Yuxiang, Shi, Yongyong, Sun, Qiang, Lu, Qing, Paten, Benedict, Bakken, Trygve E., Pollen, Alex A., Feng, Guoping, Sawyer, Sara L., Warren, Wesley C., Carbone, Lucia, Eichler, Evan E.

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Signature morpho-electric, transcriptomic, and dendritic properties of human layer 5 neocortical pyramidal neurons von Kalmbach, Brian E., Hodge, Rebecca D., Jorstad, Nikolas L., Owen, Scott, de Frates, Rebecca, Yanny, Anna Marie, Dalley, Rachel, Mallory, Matt, Graybuck, Lucas T., Radaelli, Cristina, Keene, C. Dirk, Gwinn, Ryder P., Silbergeld, Daniel L., Cobbs, Charles, Ojemann, Jeffrey G., Ko, Andrew L., Patel, Anoop P., Ellenbogen, Richard G., Bakken, Trygve E., Daigle, Tanya L., Dee, Nick, Lee, Brian R., McGraw, Medea, Nicovich, Philip R., Smith, Kimberly, Sorensen, Staci A., Tasic, Bosiljka, Zeng, Hongkui, Koch, Christof, Lein, Ed S., Ting, Jonathan T.

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A Geographic Cline of Skull and Brain Morphology among Individuals of European Ancestry von Bakken, Trygve E., Dale, Anders M., Schork, Nicholas J.

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FR-Match: robust matching of cell type clusters from single cell RNA sequencing data using the Friedman–Rafsky non-parametric test von Zhang, Yun, Aevermann, Brian D, Bakken, Trygve E, Miller, Jeremy A, Hodge, Rebecca D, Lein, Ed S, Scheuermann, Richard H

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Transcriptomic evidence that von Economo neurons are regionally specialized extratelencephalic-projecting excitatory neurons von Hodge, Rebecca D., Miller, Jeremy A., Novotny, Mark, Kalmbach, Brian E., Ting, Jonathan T., Bakken, Trygve E., Aevermann, Brian D., Barkan, Eliza R., Berkowitz-Cerasano, Madeline L., Cobbs, Charles, Diez-Fuertes, Francisco, Ding, Song-Lin, McCorrison, Jamison, Schork, Nicholas J., Shehata, Soraya I., Smith, Kimberly A., Sunkin, Susan M., Tran, Danny N., Venepally, Pratap, Yanny, Anna Marie, Steemers, Frank J., Phillips, John W., Bernard, Amy, Koch, Christof, Lasken, Roger S., Scheuermann, Richard H., Lein, Ed S.

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