Identification and dynamic quantification of regulatory elements using total RNA von Duttke, Sascha H, Chang, Max W, Heinz, Sven, Benner, Christopher

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The human initiator is a distinct and abundant element that is precisely positioned in focused core promoters von Vo Ngoc, Long, Cassidy, California Jack, Huang, Cassidy Yunjing, Duttke, Sascha H C, Kadonaga, James T

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Nascent RNA sequencing reveals distinct features in plant transcription von Hetzel, Jonathan, Duttke, Sascha H., Benner, Christopher, Chory, Joanne

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Human Promoters Are Intrinsically Directional von Duttke, Sascha H.C., Lacadie, Scott A., Ibrahim, Mahmoud M., Glass, Christopher K., Corcoran, David L., Benner, Christopher, Heinz, Sven, Kadonaga, James T., Ohler, Uwe

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The Dfm1 Derlin Is Required for ERAD Retrotranslocation of Integral Membrane Proteins von Neal, Sonya, Jaeger, Philipp A., Duttke, Sascha H., Benner, Christopher, K.Glass, Christopher, Ideker, Trey, Hampton, Randolph Y.

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The Role of Auxin in the Pattern Formation of the Asteraceae Flower Head (Capitulum) von Zoulias, Nicholas, Duttke, Sascha H. C., Garcês, Helena, Spencer, Victoria, Kim, Minsung

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Mutant p53 shapes the enhancer landscape of cancer cells in response to chronic immune signaling von Rahnamoun, Homa, Lu, Hanbin, Duttke, Sascha H., Benner, Christopher, Glass, Christopher K., Lauberth, Shannon M.

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TRF2, but not TBP, mediates the transcription of ribosomal protein genes von Wang, Yuan-Liang, Duttke, Sascha H C, Chen, Kai, Johnston, Jeff, Kassavetis, George A, Zeitlinger, Julia, Kadonaga, James T

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DNA methylation-linked chromatin accessibility affects genomic architecture in Arabidopsis von Zhong, Zhenhui, Feng, Suhua, Duttke, Sascha H., Potok, Magdalena E., Zhang, Yiwei, Gallego-Bartolomé, Javier, Liu, Wanlu, Jacobsen, Steven E.

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MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO von Ichino, Lucia, Boone, Brandon A, Strauskulage, Luke, Harris, C Jake, Kaur, Gundeep, Gladstone, Matthew A, Tan, Maverick, Feng, Suhua, Jami-Alahmadi, Yasaman, Duttke, Sascha H, Wohlschlegel, James A, Cheng, Xiaodong, Redding, Sy, Jacobsen, Steven E

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Evolution and diversification of the basal transcription machinery von Duttke, Sascha H.C.

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TRF2 and the evolution of the bilateria von Duttke, Sascha H C, Doolittle, Russell F, Wang, Yuan-Liang, Kadonaga, James T

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SREBP2-dependent lipid gene transcription enhances the infection of human dendritic cells by Zika virus von Branche, Emilie, Wang, Ying-Ting, Viramontes, Karla M., Valls Cuevas, Joan M., Xie, Jialei, Ana-Sosa-Batiz, Fernanda, Shafee, Norazizah, Duttke, Sascha H., McMillan, Rachel E., Clark, Alex E., Nguyen, Michael N., Garretson, Aaron F., Crames, Jan J., Spann, Nathan J., Zhu, Zhe, Rich, Jeremy N., Spector, Deborah H., Benner, Christopher, Shresta, Sujan, Carlin, Aaron F.

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Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function von Link, Verena M., Duttke, Sascha H., Chun, Hyun B., Holtman, Inge R., Westin, Emma, Hoeksema, Marten A., Abe, Yohei, Skola, Dylan, Romanoski, Casey E., Tao, Jenhan, Fonseca, Gregory J., Troutman, Ty D., Spann, Nathanael J., Strid, Tobias, Sakai, Mashito, Yu, Miao, Hu, Rong, Fang, Rongxin, Metzler, Dirk, Ren, Bing, Glass, Christopher K.

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RNA Polymerase III Accurately Initiates Transcription from RNA Polymerase II Promoters in Vitro von Duttke, Sascha H.C.

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Efficient small fragment sequencing of human, cattle, and bison miRNA, small RNA, or csRNA-seq libraries using AVITI von McDonald, Anna L, Boddicker, Andrew M, Savenkova, Marina I, Brabb, Ian M, Qi, Xiaodong, Moré, Daniela D, Cunha, Cristina W, Zhao, Junhua, Duttke, Sascha H

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Diverse motif ensembles specify non-redundant DNA binding activities of AP-1 family members in macrophages von Fonseca, Gregory J., Tao, Jenhan, Westin, Emma M., Duttke, Sascha H., Spann, Nathanael J., Strid, Tobias, Shen, Zeyang, Stender, Joshua D., Sakai, Mashito, Link, Verena M., Benner, Christopher, Glass, Christopher K.

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RNA-directed DNA methylation involves co-transcriptional small-RNA-guided slicing of polymerase V transcripts in Arabidopsis von Liu, Wanlu, Duttke, Sascha H., Hetzel, Jonathan, Groth, Martin, Feng, Suhua, Gallego-Bartolome, Javier, Zhong, Zhenhui, Kuo, Hsuan Yu, Wang, Zonghua, Zhai, Jixian, Chory, Joanne, Jacobsen, Steven E.

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Position-dependent function of human sequence-specific transcription factors von Duttke, Sascha H., Guzman, Carlos, Chang, Max, Delos Santos, Nathaniel P., McDonald, Bayley R., Xie, Jialei, Carlin, Aaron F., Heinz, Sven, Benner, Christopher

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From promoter motif to cardiac function: a single DPE motif affects transcription regulation and organ function in vivo von Sloutskin, Anna, Itzhak, Dekel, Vogler, Georg, Pozeilov, Hadar, Ideses, Diana, Alter, Hadar, Adato, Orit, Shachar, Hadar, Doniger, Tirza, Shohat-Ophir, Galit, Frasch, Manfred, Bodmer, Rolf, Duttke, Sascha H, Juven-Gershon, Tamar

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