Asphalt concrete modified by rubber crumbs in transport construction von Duhovny, G S, Karpenko, AV

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OpenAWSEM with Open3SPN2: A fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulations von Lu, Wei, Bueno, Carlos, Schafer, Nicholas P, Moller, Joshua, Jin, Shikai, Chen, Xun, Chen, Mingchen, Gu, Xinyu, Davtyan, Aram, de Pablo, Juan J, Wolynes, Peter G

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ftmsRanalysis: An R package for exploratory data analysis and interactive visualization of FT-MS data von Bramer, Lisa M, White, Amanda M, Stratton, Kelly G, Thompson, Allison M, Claborne, Daniel, Hofmockel, Kirsten, McCue, Lee Ann

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TAMMiCol: Tool for analysis of the morphology of microbial colonies von Tronnolone, Hayden, Gardner, Jennifer M, Sundstrom, Joanna F, Jiranek, Vladimir, Oliver, Stephen G, Binder, Benjamin J

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ModBase, a database of annotated comparative protein structure models and associated resources von Pieper, Ursula, Webb, Benjamin M, Dong, Guang Qiang, Schneidman-Duhovny, Dina, Fan, Hao, Kim, Seung Joong, Khuri, Natalia, Spill, Yannick G, Weinkam, Patrick, Hammel, Michal, Tainer, John A, Nilges, Michael, Sali, Andrej

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Targeted in situ cross-linking mass spectrometry and integrative modeling reveal the architectures of three proteins from SARS-CoV-2 von Slavin, Moriya, Zamel, Joanna, Zohar, Keren, Eliyahu, Tsiona, Braitbard, Merav, Brielle, Esther, Baraz, Leah, Stolovich-Rain, Miri, Friedman, Ahuva, Wolf, Dana G., Rouvinski, Alexander, Linial, Michal, Schneidman-Duhovny, Dina, Kalisman, Nir

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Predicting CD4 T-cell epitopes based on antigen cleavage, MHCII presentation, and TCR recognition von Schneidman-Duhovny, Dina, Khuri, Natalia, Dong, Guang Qiang, Winter, Michael B, Shifrut, Eric, Friedman, Nir, Craik, Charles S, Pratt, Kathleen P, Paz, Pedro, Aswad, Fred, Sali, Andrej

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Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment von Lensink, Marc F., Velankar, Sameer, Kryshtafovych, Andriy, Huang, Shen-You, Schneidman-Duhovny, Dina, Segura, Joan, Fernandez-Fuentes, Narcis, Viswanath, Shruthi, Elber, Ron, Grudinin, Sergei, Popov, Petr, Neveu, Emilie, Lee, Hasup, Baek, Minkyung, Park, Sangwoo, Heo, Lim, Rie Lee, Gyu, Seok, Chaok, Qin, Sanbo, Zhou, Huan-Xiang, Ritchie, David W., Maigret, Bernard, Devignes, Marie-Dominique, Ghoorah, Anisah, Torchala, Mieczyslaw, Chaleil, Raphaël A.G., Bates, Paul A., Ben-Zeev, Efrat, Eisenstein, Miriam, Negi, Surendra S., Weng, Zhiping, Vreven, Thom, Pierce, Brian G., Borrman, Tyler M., Yu, Jinchao, Ochsenbein, Françoise, Guerois, Raphaël, Vangone, Anna, Rodrigues, João P.G.L.M., van Zundert, Gydo, Nellen, Mehdi, Xue, Li, Karaca, Ezgi, Melquiond, Adrien S.J., Visscher, Koen, Kastritis, Panagiotis L., Bonvin, Alexandre M.J.J., Xu, Xianjin, Qiu, Liming, Yan, Chengfei, Li, Jilong, Ma, Zhiwei, Cheng, Jianlin, Zou, Xiaoqin, Shen, Yang, Peterson, Lenna X., Kim, Hyung-Rae, Roy, Amit, Han, Xusi, Esquivel-Rodriguez, Juan, Kihara, Daisuke, Yu, Xiaofeng, Bruce, Neil J., Fuller, Jonathan C., Wade, Rebecca C., Anishchenko, Ivan, Kundrotas, Petras J., Vakser, Ilya A., Imai, Kenichiro, Yamada, Kazunori, Oda, Toshiyuki, Nakamura, Tsukasa, Tomii, Kentaro, Pallara, Chiara, Romero-Durana, Miguel, Jiménez-García, Brian, Moal, Iain H., Férnandez-Recio, Juan, Joung, Jong Young, Kim, Jong Yun, Joo, Keehyoung, Lee, Jooyoung, Kozakov, Dima, Vajda, Sandor, Mottarella, Scott, Hall, David R., Beglov, Dmitri, Mamonov, Artem, Xia, Bing, Bohnuud, Tanggis, Del Carpio, Carlos A., Ichiishi, Eichiro, Marze, Nicholas, Kuroda, Daisuke, Gray, Jeffrey J., Chermak, Edrisse, Cavallo, Luigi, Oliva, Romina, Tovchigrechko, Andrey, Wodak, Shoshana J.

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Structural basis for Mis18 complex assembly and its implications for centromere maintenance von Thamkachy, Reshma, Medina-Pritchard, Bethan, Park, Sang Ho, Chiodi, Carla G, Zou, Juan, de la Torre-Barranco, Maria, Shimanaka, Kazuma, Abad, Maria Alba, Gallego Páramo, Cristina, Feederle, Regina, Ruksenaite, Emilija, Heun, Patrick, Davies, Owen R, Rappsilber, Juri, Schneidman-Duhovny, Dina, Cho, Uhn-Soo, Jeyaprakash, A Arockia

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Identification of thrombosis-related conformational binding epitopes on domain I of β2-glycoprotein I von Kim, Seung Joong, Schneidman-Duhovny, Dina, de Groot, Philip G., Urbanus, Rolf T., Carter, Lester, de Laat-Kremers, Romy, Weiss, Thomas M., Chan, Man K., Sali, Andrej, Rand, Jacob H., de Laat, Bas

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De novo, deleterious sequence variants that alter the transcriptional activity of the homeoprotein PBX1 are associated with intellectual disability and pleiotropic developmental de... von Slavotinek, Anne, Risolino, Maurizio, Losa, Marta, Cho, Megan T, Monaghan, Kristin G, Schneidman-Duhovny, Dina, Parisotto, Sarah, Herkert, Johanna C, Stegmann, Alexander P A, Miller, Kathryn, Shur, Natasha, Chui, Jacqueline, Muller, Eric, DeBrosse, Suzanne, Szot, Justin O, Chapman, Gavin, Pachter, Nicholas S, Winlaw, David S, Mendelsohn, Bryce A, Dalton, Joline, Sarafoglou, Kyriakie, Karachunski, Peter I, Lewis, Jane M, Pedro, Helio, Dunwoodie, Sally L, Selleri, Licia, Shieh, Joseph

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ftmsRanalysis: An R package for exploratory data analysis and interactive visualization of FT-MS data von Bramer, Lisa M., White, Amanda M., Stratton, Kelly G., Thompson, Allison M., Claborne, Daniel, Hofmockel, Kirsten, McCue, Lee Ann, Schneidman-Duhovny, ed., Dina

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SAXS Merge: an automated statistical method to merge SAXS profiles using Gaussian processes von Spill, Yannick G., Kim, Seung Joong, Schneidman-Duhovny, Dina, Russel, Daniel, Webb, Ben, Sali, Andrej, Nilges, Michael

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Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment von Lensink, Marc F, Velankar, Sameer, Kryshtafovych, Andriy, Huang, Shen You, Schneidman-Duhovny, Dina, Sali, Andrej, Segura, Joan, Fernandez-Fuentes, Narcis, Viswanath, Shruthi, Grudinin, Sergei, Popov, Petr, Neveu, Emilie, Lee, Hasup, Baek, Minkyung, Park, Sangwoo, Heo, Lim, Rie Lee, Gyu, Seok, Chaok, Qin, Sanbo, Zhou, Huan Xiang, Ritchie, David W, Maigret, Bernard, Devignes, Marie Dominique, Ghoorah, Anisah, Torchala, Mieczyslaw, Chaleil, Raphaël A G, Bates, Paul A, Ben-Zeev, Efrat, Eisenstein, Miriam, Negi, Surendra S, Weng, Zhiping, Vreven, Thom, Pierce, Brian G, Borrman, Tyler M, Yu, Jinchao, Ochsenbein, Françoise, Guerois, Raphaël, Vangone, Anna, Garcia Lopes Maia Rodrigues, João, van Zundert, Gydo, Nellen, Mehdi, Xue, Li, Karaca, Ezgi, Melquiond, Adrien S J, Visscher, Koen, Kastritis, Panagiotis L, Bonvin, Alexandre M J J, Xu, Xianjin, Qiu, Liming, Yan, Chengfei, Li, Jilong, Ma, Zhiwei, Cheng, Jianlin, Zou, Xiaoqin, Shen, Yang, Peterson, Lenna X, Kim, Hyung Rae, Roy, Amit, Han, Xusi, Esquivel-Rodriguez, Juan, Kihara, Daisuke, Yu, Xiaofeng, Bruce, Neil J, Fuller, Jonathan C, Wade, Rebecca C, Anishchenko, Ivan, Kundrotas, Petras J, Vakser, Ilya A, Imai, Kenichiro, Yamada, Kazunori, Oda, Toshiyuki, Nakamura, Tsukasa, Tomii, Kentaro, Pallara, Chiara, Romero-Durana, Miguel, Jiménez-García, Brian, Moal, Iain H, Férnandez-Recio, Juan, Joung, Jong Young, Kim, Jong Yun, Joo, Keehyoung, Lee, Jooyoung, Kozakov, Dima, Vajda, Sandor, Mottarella, Scott, Hall, David R, Beglov, Dmitri, Mamonov, Artem, Xia, Bing, Bohnuud, Tanggis, Ichiishi, Eichiro, Marze, Nicholas, Kuroda, Daisuke, Roy Burman, Shourya S, Gray, Jeffrey J, Chermak, Edrisse, Cavallo, Luigi, Oliva, Romina, Tovchigrechko, Andrey, Wodak, Shoshana J

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Modeling of Proteins and Their Assemblies with the Integrative Modeling Platform von Webb, Benjamin, Lasker, Keren, Schneidman-Duhovny, Dina, Tjioe, Elina, Phillips, Jeremy, Kim, Seung Joong, Velázquez-Muriel, Javier, Russel, Daniel, Sali, Andrej

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Benchmark Of The Saxs Merge Method von Spill, Yannick G., Kim, Seung Joong, Schneidman-Duhovny, Dina, Russel, Daniel, Webb, Ben, Sali, Andrej, Nilges, Michael

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