CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von duVerle, David A, Yotsukura, Sohiya, Nomura, Seitaro, Aburatani, Hiroyuki, Tsuda, Koji

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Calpain cleavage prediction using multiple kernel learning von DuVerle, David A, Ono, Yasuko, Sorimachi, Hiroyuki, Mamitsuka, Hiroshi

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CalCleaveMKL: a Tool for Calpain Cleavage Prediction von duVerle, David A., Mamitsuka, Hiroshi

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Computational recognition for long non-coding RNA (lncRNA): Software and databases von Yotsukura, Sohiya, duVerle, David, Hancock, Timothy, Natsume-Kitatani, Yayoi, Mamitsuka, Hiroshi

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Predictions of Cleavability of Calpain Proteolysis by Quantitative Structure-Activity Relationship Analysis Using Newly Determined Cleavage Sites and Catalytic Efficiencies of an O... von Shinkai-Ouchi, Fumiko, Koyama, Suguru, Ono, Yasuko, Hata, Shoji, Ojima, Koichi, Shindo, Mayumi, duVerle, David, Ueno, Mika, Kitamura, Fujiko, Doi, Naoko, Takigawa, Ichigaku, Mamitsuka, Hiroshi, Sorimachi, Hiroyuki

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A review of statistical methods for prediction of proteolytic cleavage von DUVERLE, David A, MAMITSUKA, Hiroshi

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Discovering combinatorial interactions in survival data von Duverle, David A, Takeuchi, Ichiro, Murakami-Tonami, Yuko, Kadomatsu, Kenji, Tsuda, Koji

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Comparative Analysis of Patient-Matched PDOs Revealed a Reduction in OLFM4-Associated Clusters in Metastatic Lesions in Colorectal Cancer von Okamoto, Takuya, duVerle, David, Yaginuma, Katsuyuki, Natsume, Yasuko, Yamanaka, Hitomi, Kusama, Daisuke, Fukuda, Mayuko, Yamamoto, Mayuko, Perraudeau, Fanny, Srivastava, Upasna, Kashima, Yukie, Suzuki, Ayako, Kuze, Yuuta, Takahashi, Yu, Ueno, Masashi, Sakai, Yoshiharu, Noda, Tetsuo, Tsuda, Koji, Suzuki, Yutaka, Nagayama, Satoshi, Yao, Ryoji

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SiBIC: A Tool for Generating a Network of Biclusters Captured by Maximal Frequent Itemset Mining von Takahashi, Kei-ichiro, duVerle, David A., Yotsukura, Sohiya, Takigawa, Ichigaku, Mamitsuka, Hiroshi

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Significant Pattern Mining with Confounding Variables von Terada, Aika, duVerle, David, Tsuda, Koji

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CaMPDB: a resource for calpain and modulatory proteolysis von duVerle, David, Takigawa, Ichigaku, Ono, Yasuko, Sorimachi, Hiroyuki, Mamitsuka, Hiroshi

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HILDA: A Discourse Parser Using Support Vector Machine Classification von Hernault, Hugo, Prendinger, Helmut, duVerle, David A, Ishizuka, Mitsuru

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Additional file 10 of CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von DuVerle, David, Sohiya Yotsukura, Seitaro Nomura, Aburatani, Hiroyuki, Tsuda, Koji

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Additional file 4 of CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von DuVerle, David, Sohiya Yotsukura, Seitaro Nomura, Aburatani, Hiroyuki, Tsuda, Koji

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Additional file 2 of CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von DuVerle, David, Sohiya Yotsukura, Seitaro Nomura, Aburatani, Hiroyuki, Tsuda, Koji

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Additional file 9 of CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von DuVerle, David, Sohiya Yotsukura, Seitaro Nomura, Aburatani, Hiroyuki, Tsuda, Koji

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Additional file 5 of CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von DuVerle, David, Sohiya Yotsukura, Seitaro Nomura, Aburatani, Hiroyuki, Tsuda, Koji

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Additional file 7 of CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von DuVerle, David, Sohiya Yotsukura, Seitaro Nomura, Aburatani, Hiroyuki, Tsuda, Koji

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Additional file 1 of CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von DuVerle, David, Sohiya Yotsukura, Seitaro Nomura, Aburatani, Hiroyuki, Tsuda, Koji

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Additional file 11 of CellTree: an R/bioconductor package to infer the hierarchical structure of cell populations from single-cell RNA-seq data von DuVerle, David, Sohiya Yotsukura, Seitaro Nomura, Aburatani, Hiroyuki, Tsuda, Koji

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